EY756384

Overview
NameEY756384
Unique NameEY756384
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756384 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11
Identity = 27/62 (43.55%), Postives = 43/62 (69.35%), Query Frame = 3
Query:   30 YYPPCPQPELTLGLQSHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQV 215
            Y+PPCP+P+LT G   HSD   LT+L+ D++EGLQV ++G+W  V  +  A+++ + D  Q+
Sbjct:  225 YFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQL 286          
BLAST of EY756384 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:   24 ISYYPPCPQPELTLGLQSHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQV 215
            I+YYP CPQPEL LG+++H+D  ALT ++ + V GLQ+  +G WVT + +  +I++ + D  ++
Sbjct:  218 INYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEI 281          
BLAST of EY756384 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 28/64 (43.75%), Postives = 45/64 (70.31%), Query Frame = 3
Query:   24 ISYYPPCPQPELTLGLQSHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQV 215
            I+YYP CPQPEL LG+++H+D  ALT ++ + V GLQ+  +G WVT + +  +IV+ + D  ++
Sbjct:  218 INYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEI 281          
BLAST of EY756384 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11
Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 3
Query:   24 ISYYPPCPQPELTLGLQSHSDFGALTLLIQDDVEGLQVLKDGHWVTVQPLSEAIVVILSDQTQV 215
            I+YYP CPQPEL LG+++H+D  ALT ++ + V GLQ+  +G WVT + +  +I++ + D  ++
Sbjct:  220 INYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEI 283          
The following BLAST results are available for this feature:
BLAST of EY756384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
ACCH2_ARATH4.574e-1143.551-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
LDOX_PETHY5.974e-1142.19Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_MALDO5.974e-1143.75Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_VITVI7.803e-1142.19Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-A05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756384 ID=EY756384; Name=EY756384; organism=Citrus sinensis; type=EST; length=786bp
CCACGCGTCCGCAGAATATTACTATTAGTTATTACCCGCCGTGTCCGCAG
CCTGAGCTTACGCTTGGGTTGCAGTCACATTCGGATTTTGGGGCGTTGAC
GCTTTTGATTCAAGATGATGTTGAGGGTCTTCAGGTTTTGAAGGATGGAC
ATTGGGTCACTGTTCAGCCCTTATCTGAAGCTATTGTTGTCATTTTGTCT
GATCAAACTCAGGTATCGATTTAGCTATATGCATTTGTTTGTACAAAATT
GTGTCAGTCATGTGAGATCCGTGGCATTACTGGAGTATTGTGATCCTTGT
CGAATGATTCTGAGCTATATGTCAGGACTCTTCTGCAGTTCTTGCTTTGC
TAGGAAGTTTCTGTTGTGATGCATGGGAGATTTTGACAAACGGAGAGTAT
ATCAGTGCTATACATCGGGCCATAACAAATGCCAGCAGGGCGCGACTCTC
AGTTGCTACATTTCACGACCCAGCAAAGACAGTCAAAATATCCCCTGCTT
CTGAGCTTGTCAGCAAATCTTCCCTTCTCCGTTACAGGCAGGTGGTTTAT
GGCGACTATGTATCATCATGGTATACCAAGGGCCCAGAAGGAAAACGAAA
CCTTGATGCCCTTTTGCTTGATAGTTAGATGGAAGTGTTTTAATCCTCTC
TGGTAACATAAGCGACGTTAAAGAGTGCTCTCCGCACCTGCATGTGACAA
TTGATTTGNACAATNGCTATTTGATTCCTTCGGCTATTATATATATTTTT
TAATTTTTGACCATAAAAAAAAAAAAAAAAAAAAAA
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