EY756382

Overview
NameEY756382
Unique NameEY756382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756382 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18
Identity = 53/171 (30.99%), Postives = 87/171 (50.88%), Query Frame = 1
Query:   49 PGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 561
            PGM               K AKAMG  V  I+ +  K  ++V  LGA+  ++S +  +M    G+ D I+ T+   H ++P I LLK +  +  +G    P  +    L      +  SLI G  E +EM+ F ++HNI  D+++I AD +N   ++L ++  +YR+VID+
Sbjct:  247 PGMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTNVWQMNQHKGSFDFILSTIPMAHDIVPYIELLKYKATICTVGELF-PTVINGMDLAQHPCFLQSSLIAGSDEIKEMLAFCSEHNIMPDVQIIKADKINDTRQKLLESKAKYRYVIDI 416          
BLAST of EY756382 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.136e-16
Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  103 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 555
            K   AMG +VT  S++P+K+ E +  +GAD  + SRD   ++A  G  D II+TV+      P    L   G    +GA   PL +PAF L+ G + V GS  G   E ++++ FAA+  +    E+ P   +N A++ +     RYR V+
Sbjct:  186 KLLHAMGCEVTAFSSNPAKEQEVLA-MGADKVVNSRDPQALKALAGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSVSGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVL 335          
BLAST of EY756382 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.217e-12
Identity = 45/154 (29.22%), Postives = 76/154 (49.35%), Query Frame = 1
Query:  103 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 555
            ++AKAMG+ V  +  S  +KS+  + LGAD  +    +D ++A    + G+   +S              +K  G LV++G P   L +P F  +     V GS++G  K+ QE +DFAA+  +R  +E    + +N   ER+ K  +  R V+
Sbjct:  182 QYAKAMGLNVVAVDIS-DEKSKLAKDLGADIAINGLKEDPVKAIHDQVGGVHAAISVAVNKKAFEQAYQSVKRGGTLVVVGLPNADLPIPIFDTVLNGVSVKGSIVGTRKDMQEALDFAARGKVRPIVETAELEEINEVFERMEKGKINGRIVL 334          
BLAST of EY756382 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.781e-12
Identity = 45/156 (28.85%), Postives = 80/156 (51.28%), Query Frame = 1
Query:  103 KFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD---EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 561
            ++AKAMG+ V      P K + A E+LGAD  + +R  D   E+Q   G + G + T  +   +     +L+S+G + L+G P   + LP F  +  R  V GS++G  ++ +E ++FA +  + A       + +N   ER+ +  +  R V+D+
Sbjct:  184 QYAKAMGMHVAAADIFPDKLALA-EKLGADLVVDARAPDAVEEVQRRTGGLHGALVTAVSPKAMEQAYSMLRSKGTMALVGLPPGQICLPVFDTVLKRITVRGSIVGTRQDLEEALEFAGEGKVAAHFSWDKIENINAIFERMEEGKIDGRIVLDL 338          
BLAST of EY756382 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.423e-12
Identity = 51/176 (28.98%), Postives = 82/176 (46.59%), Query Frame = 1
Query:   46 KPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS---QGKLVLLGAPEKPLELPAFP-LLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVIDV 561
            KPG                ++AKAMG+ V  +     +K E  ++LGAD  +  +  D  Q     + G+  TV             KS    G  VL+G P + + +P F  +L G KI+G S++G  K+ QE + FAA+  ++  +EV P + +N   +R+ K  +  R V+ V
Sbjct:  163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLG-DEKLELAKQLGADLVVNPKHDDAAQWIKEKVGGVHATVVTAVSKAAFESAYKSIRRGGACVLVGLPPEEIPIPIFDTVLNGVKIIG-SIVGTRKDLQEALQFAAEGKVKTIVEVQPLENINDVFDRMLKGQINGRVVLKV 336          
BLAST of EY756382 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.876e-11
Identity = 48/174 (27.59%), Postives = 82/174 (47.13%), Query Frame = 1
Query:   46 KPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFP-LLTGRKIVGGSLIGGLKETQEMIDFAAKHNIRADIEVIPADYVNTAMERLAKADVRYRFVI 555
            KPG                ++AKAMG+ V  +     +K E  + LGAD  +    +D    M+  +G +   + T  +          ++  G  VL+G P + + +P F  +L G KI+G S++G  K+ QE + FAA+  ++  IEV P + +N   +R+ K  +  R V+
Sbjct:  163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG-DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG-SIVGTRKDLQEALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVL 334          
The following BLAST results are available for this feature:
BLAST of EY756382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
YL498_MIMIV6.022e-1830.99Probable zinc-type alcohol dehydrogenase-like prot... [more]
YJGB_ECOLI1.136e-1633.77Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH2_BACST2.217e-1229.22Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADHA_RHIME3.781e-1228.85Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH1_BACST8.423e-1228.98Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST1.876e-1127.59Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-A02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756382 ID=EY756382; Name=EY756382; organism=Citrus sinensis; type=EST; length=874bp
TTCGTCGACCCCGCGTCCGGTCCGTTGAGATTCTATGGACTCGACAAGCC
TGGTATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTG
TCAAATTCGCAAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCTCC
CCTAGCAAGAAGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTTTT
GGTCAGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATG
GTATCATCGATACAGTATCTGCAGTTCACCCGCTAATGCCGTTGATTGGA
CTGTTGAAATCTCAAGGAAAGCTTGTACTTCTTGGTGCACCCGAGAAGCC
ACTAGAGCTACCAGCTTTCCCCCTGCTCACGGGGAGGAAGATAGTTGGTG
GCAGTCTCATTGGGGGGTTGAAGGAGACTCAAGAGATGATTGATTTTGCA
GCAAAACACAACATCAGAGCTGATATTGAGGTCATACCGGCCGACTATGT
GAACACAGCCATGGAGCGCCTTGCTAAAGCCGATGTTAGATATCGCTTTG
TCATCGACGTTGCAAACACAATGAAGTCCACTCCTTNNAATTTCTCCCTT
TTTGAGTGCGCTTTAAACGAGGAATGTGCGTTTATTGTTGAGTCACAACA
TCGTCTAAGTTTTAGATTATGNTAGCCTTTTGGTGGGATTTCAAAACTGT
TTTTACTTTTTAAGAATAATAATTTCCTGACTATATTCCATCTGGGTGAC
AAATTATGTATAGCGAGCTAAATGTAGTTTTTACTGAATTTAATATTCCG
GNTTTGATTTACTTAAAAAAAAAAAAAAAAAAAAAAAAAGGGCGGCGCTC
TTAAAGATCCAGTTTAGAACCGGG
back to top