EY756379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3E_SOYBN (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Glycine max GN=FAD3 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 49/94 (52.13%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 40 VYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 +YG+P I +L +TYL H H LP Y EW +LRG L+TVDRDYG + + H+I THV HHLF +PHYH +EAT A KP+LG+YY+ Sbjct: 241 LYGIPYWIFVMWLDFVTYLHHHGHHQKLPWYRGKEWSYLRGGLTTVDRDYGWIYNIHHDI-GTHVIHHLFPQIPHYHLVEATQAAKPVLGDYYR 333
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3C_SESIN (Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 19 GLAWLICVYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 G L+ +YG+P L +L L+TYL H LP Y EW +LRG L+T+DRDYG +N + H+I THV HHLF +PHYH +EAT A KP+LG+YY+ Sbjct: 301 GPVQLLKLYGIPYLGNVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYR 400
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3C_ARATH (Omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 48/97 (49.48%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 31 LICVYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 ++ +YG+P I +L +TYL H LP Y EW +LRG L+T+DRDYG++N + H+I THV HHLF +PHYH +EAT A KP+LG+YY+ Sbjct: 301 MLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 396
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3D_ARATH (Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD8 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 31 LICVYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 ++ +YG+P I +L +TYL H LP Y EW +LRG L+T+DRDYG +N + H+I THV HHLF +PHYH +EAT A KP+LG+YY+ Sbjct: 294 MLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3E_BRANA (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Brassica napus GN=FAD3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 40 VYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 VYGVP +I +L +TYL H LP Y EW +LRG L+T+DRDYG+ N + H+I THV HHLF +PHYH ++AT A K +LG YY+ Sbjct: 239 VYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATRAAKHVLGRYYR 331
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 40 VYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 VYGVP +I +L +TYL H LP Y EW +LRG L+T+DRDYG+ N + H+I THV HHLF +PHYH ++AT A K +LG YY+ Sbjct: 242 VYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHHDI-GTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYR 334
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3C_RICCO (Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20 Identity = 47/101 (46.53%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 19 GLAWLICVYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 G ++ +YG+P I +L +TYL H LP Y W +LRG L+T+DRDYG +N + H+I THV HHLF +PHYH +EAT A KP++G+YY+ Sbjct: 311 GPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYR 410
BLAST of EY756379 vs. ExPASy Swiss-Prot
Match: FAD3C_BRANA (Omega-3 fatty acid desaturase, chloroplastic (Fragment) OS=Brassica napus GN=FAD7 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.446e-20 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 31 LICVYGVPLLIVNGFLVLITYLQHT--HPALPHYNSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQ 315 ++ +Y +P I +L +TYL H LP Y EW +LRG L+T+DRDYG++N + H+I THV HHLF +PHYH +EAT A KP+LG+YY+ Sbjct: 259 MLKLYVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 354 The following BLAST results are available for this feature:
BLAST of EY756379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756379 ID=EY756379; Name=EY756379; organism=Citrus sinensis; type=EST; length=678bpback to top |