EY756378

Overview
NameEY756378
Unique NameEY756378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_PROAC (Malate dehydrogenase OS=Propionibacterium acnes GN=mdh PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.518e-49
Identity = 109/220 (49.55%), Postives = 142/220 (64.55%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M + PV++ VTGAAGQI Y+L+  IA G +LG D P+ L +L+I PA +AL GV MEL D AF  L  +    D  +   GVN A +VG  PRK GMER D+++KN +I+ AQ  AL   AA + +VLV  NPANTNALI    A  IP  +   LTRLDHNRA  Q++ K    V+DV+++ IWGNHSS+QYPDV HA V   AG+K     + ++AW+
Sbjct:    1 MTQTPVKIAVTGAAGQICYSLLFRIASGSLLG-DTPIELRLLEITPALKALEGVVMELDDCAFGNLVNIEIGDDPKKVFDGVNAAFLVGAMPRKAGMERSDLLTKNGAIFTAQGKALNDVAADDVRVLVTGNPANTNALIAATNAVDIPNNHFAALTRLDHNRAKTQLARKTGKTVNDVRHMTIWGNHSSTQYPDVFHAEV---AGQKATN--LVNEAWI 214          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_COREF (Malate dehydrogenase OS=Corynebacterium efficiens GN=mdh PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.478e-48
Identity = 102/217 (47.00%), Postives = 138/217 (63.59%), Query Frame = 1
Query:   85 PVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLN 735
            P ++ VTGAAGQI Y+L+  IA G + G D PV L++L+IP A     GV MEL D+AFPLL  +  T D  EA  G N A +VG  PR +G ER  ++S N  I+  Q  A+  HAA + +VLVV NPANTNALI    AP +P      + RLDHNRA+ Q++ K     S+ ++V++WGNHS++Q+PD+ +ATV    GEK V +LV  D ++N
Sbjct:    4 PKKITVTGAAGQIAYSLLWRIANGEVYGADTPVELNLLEIPDALGGAEGVAMELSDSAFPLLHNINITADLNEAFDGANAAFLVGAKPRGKGEERAALLSNNGKIFGPQGKAINDHAAQDIRVLVVGNPANTNALIAMSNAPDVPQSRFNAMMRLDHNRAISQLATKTGRLSSEFQDVVVWGNHSAAQFPDITYATV---GGEK-VSDLVDHDWYVN 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_CORDI (Malate dehydrogenase OS=Corynebacterium diphtheriae GN=mdh PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.521e-48
Identity = 101/222 (45.50%), Postives = 138/222 (62.16%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNG 738
            M +   ++ VTGAAGQI Y+L+  IA G + G + PV L +L+IP A     GV MEL+D+AFPLLK +V T  A  A  G N A +VG  PR +G ER D+++ N  I+  Q  AL  +AA + +VLVV NPANTNALI +  A  IPA     + RLDHNR + Q+SEKL    +D++  ++WGNHS+ Q+PD+ +AT+    G + +  LV  D W  G
Sbjct:    1 MTESVKKIAVTGAAGQIAYSLLWRIANGDVYGKNTPVELQLLEIPQAIGGAEGVAMELLDSAFPLLKNIVVTDKAEVAFDGTNAAFLVGAKPRGKGEERADLLTANGKIFGPQGKALNDNAADDIRVLVVGNPANTNALIAQHAAKDIPADRFNAMMRLDHNRGIAQLSEKLGRDKNDIEKFVVWGNHSAGQFPDITYATI----GGEAISGLVDHD-WYTG 217          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_METCA (Malate dehydrogenase OS=Methylococcus capsulatus GN=mdh PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.211e-48
Identity = 102/217 (47.00%), Postives = 132/217 (60.83%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAW 729
            K PV V VTGAAGQI Y+L+  IA G + G  QPVIL +LD+P A   L GV MEL D A PLL+ +  ++D  E   G     M+G  PR  GMER+D++  N  I+ AQ  AL + A+   K+LVV NPANTNALI +  AP +     + +TRLDHNRA   ++      V+++  V+IWGNHS +QYPD++HA V      KP   LV D AW
Sbjct:    2 KTPVHVAVTGAAGQIAYSLLFRIAVGDLFGPHQPVILKLLDVPSAERVLEGVAMELDDCASPLLQEIEVSSDPAEVFDGAEAVFMLGATPRGPGMERRDLLQVNADIFSAQGRALNESASRRVKILVVGNPANTNALIAQRNAPDLAPGCFSAMTRLDHNRATSLLARHCGCNVAEISRVVIWGNHSPTQYPDLHHARVK----GKPALSLV-DPAW 213          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEPBP (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=mdh PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.230e-47
Identity = 104/218 (47.71%), Postives = 138/218 (63.30%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            V+V VTGAAGQIGYAL+  IA G M G D  V L +L++  A  A  GV MEL D AFPLL+ V  +++  EA   +N A++VG  PRK GMER D++  N  I+  Q  A+E++AA + +VLVV NP NTNALI    A  +P+     +T LD NRA  Q+++K  V V DV NV IWGNHS++QYPD  +A V+     KP  +++ D  WL G+
Sbjct:    5 VKVAVTGAAGQIGYALLFRIASGQMFGPDTAVELQLLELEQAIPAAKGVIMELDDCAFPLLEKVSVSSNIDEAFRDINWALLVGSVPRKAGMERGDLLKINGGIFTTQGKAIEKNAASDVRVLVVGNPCNTNALIAMNNAKGVPSDRWFAMTGLDENRAKTQLAQKAGVLVKDVSNVAIWGNHSATQYPDFFNAKVN----GKPATDVISDHDWLKGD 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEPBA (Malate dehydrogenase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=mdh PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.230e-47
Identity = 104/218 (47.71%), Postives = 138/218 (63.30%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            V+V VTGAAGQIGYAL+  IA G M G D  V L +L++  A  A  GV MEL D AFPLL+ V  +++  EA   +N A++VG  PRK GMER D++  N  I+  Q  A+E++AA + +VLVV NP NTNALI    A  +P+     +T LD NRA  Q+++K  V V DV NV IWGNHS++QYPD  +A V+     KP  +++ D  WL G+
Sbjct:    5 VKVAVTGAAGQIGYALLFRIASGQMFGPDTAVELQLLELEQAIPAAKGVIMELDDCAFPLLEKVSVSSNIDEAFRDINWALLVGSVPRKAGMERGDLLKINGGIFTTQGKAIEKNAASDVRVLVVGNPCNTNALIAMNNAKGVPSDRWFAMTGLDENRAKTQLAQKAGVLVKDVSNVAIWGNHSATQYPDFFNAKVN----GKPATDVISDHDWLKGD 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH2_RHOFD (Malate dehydrogenase 2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh2 PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.740e-47
Identity = 112/279 (40.14%), Postives = 155/279 (55.56%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPS---IPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTTWC*IIKAESLQGSAVLLCCDIF-----------RIGSWTLRHLGSW 867
            M + PVRV VTGAAG++ YAL+  IA G MLG DQPV L + D+P A +A+ GV MEL D AFPLL  ++AT D V A +   IA++V   PR  G ER +V++ N  I+ AQ + + +HA P+CKVLVV NP NTNA +  + A     IPA+N   L RLDHNRAL Q++ K    V  VK + +WGNHS + Y D    T+   +    V  ++ + AW      H  T    +++    +G A+L    ++           ++  W L   G W
Sbjct:    1 MNQAPVRVTVTGAAGRVAYALLFRIASGDMLGADQPVQLVLFDLPHAMKAMQGVVMELEDCAFPLLTEIIATDDPVLAFSDTQIALLVSARPRAVGAERLEVLADNAKIFAAQGAVIGRHANPDCKVLVVGNPCNTNACVAMKAAQKFSRIPARNFAALLRLDHNRALAQLALKTGRPVGGVKRLAVWGNHSPTVYADDRFTTIDGDS----VPAIIDNIAW------HHDT----LVRTVDKRGEAILAARGLYAEASAASAAIDQMRDWWLGTRGEW 265          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEGPH (Malate dehydrogenase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=mdh PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47
Identity = 98/220 (44.55%), Postives = 136/220 (61.82%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M    VRV VTGAAGQIGYALV  IA G M G +  V L++L++ PA  +L GV MEL D AFPLLK +V T D  +A  GVN A++VG  PRK+GMER D++  N  I+  Q  A+  +A+ + +V VV NP NTN LI    A  +P+     +T LD  RA  Q+++K  V ++ V  + IWGNHS++QYPD  +A ++  +      +++ D+ WL
Sbjct:    1 MTNNRVRVAVTGAAGQIGYALVFRIASGQMFGPNTEVELNLLELEPALPSLEGVAMELDDCAFPLLKRIVCTADLNKAMDGVNWALLVGSVPRKQGMERSDLLQINGGIFTKQGQAINDYASDDVRVFVVGNPCNTNCLIAMNHAKDVPSDRFYAMTTLDELRARTQLAKKAGVDITAVTQMTIWGNHSATQYPDFYNAKINGTS----AAQVINDETWL 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEGPA (Malate dehydrogenase OS=Legionella pneumophila (strain Paris) GN=mdh PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.104e-47
Identity = 98/220 (44.55%), Postives = 136/220 (61.82%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M    VRV VTGAAGQIGYALV  IA G M G +  V L++L++ PA  +L GV MEL D AFPLLK +V T D  +A  GVN A++VG  PRK+GMER D++  N  I+  Q  A+  +A+ + +V VV NP NTN LI    A  +P+     +T LD  RA  Q+++K  V ++ V  + IWGNHS++QYPD  +A ++  +      +++ D+ WL
Sbjct:    1 MTNNRVRVAVTGAAGQIGYALVFRIASGQMFGPNTEVELNLLELEPALPSLEGVAMELDDCAFPLLKRIVCTADLNKAMDGVNWALLVGSVPRKQGMERSDLLQINGGIFTKQGQAINDYASDDVRVFVVGNPCNTNCLIAMNHAKDVPSDRFYAMTTLDELRARTQLAKKAGVDITAVTQMTIWGNHSATQYPDFYNAKINGTS----AAQVINDETWL 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEPBL (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mdh PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47
Identity = 102/218 (46.79%), Postives = 137/218 (62.84%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            V+V VTGAAGQIGY+L+  IA G M GTD  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GMER D++  N  I+  Q  A+E++AA + +VLVV NP NTN LI    A  IP+     +T+LD NRA  Q++ K  V V +V ++ IWGNHSS+QYPD  +A +      KPV +++ D  WL G+
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKINGGIFINQGKAIEKNAASDVRVLVVGNPCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSSTQYPDFYNAKI----SGKPVTDVISDHEWLKGD 218          
The following BLAST results are available for this feature:
BLAST of EY756378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MDH_PROAC8.518e-4949.55Malate dehydrogenase OS=Propionibacterium acnes GN... [more]
MDH_COREF2.478e-4847.00Malate dehydrogenase OS=Corynebacterium efficiens ... [more]
MDH_CORDI5.521e-4845.50Malate dehydrogenase OS=Corynebacterium diphtheria... [more]
MDH_METCA7.211e-4847.00Malate dehydrogenase OS=Methylococcus capsulatus G... [more]
MDH_LEPBP1.230e-4747.71Malate dehydrogenase OS=Leptospira biflexa serovar... [more]
MDH_LEPBA1.230e-4747.71Malate dehydrogenase OS=Leptospira biflexa serovar... [more]
MDH2_RHOFD2.740e-4740.14Malate dehydrogenase 2 OS=Rhodoferax ferrireducens... [more]
MDH_LEGPH6.104e-4744.55Malate dehydrogenase OS=Legionella pneumophila sub... [more]
MDH_LEGPA6.104e-4744.55Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH_LEPBL7.972e-4746.79Malate dehydrogenase OS=Leptospira borgpetersenii ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756378 ID=EY756378; Name=EY756378; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTTCTCTCGCTTTACTGGAAAAATCTTTTCGTTTCCTGT
GATACATCTCTGATCCGAACTAATGGCCAAGGAACCAGTTCGCGTTCTCG
TCACCGGCGCCGCAGGGCAAATTGGATATGCACTTGTCCCCATGATTGCT
AGGGGAGTGATGTTGGGTACTGACCAGCCTGTGATTCTGCACATGCTTGA
TATCCCACCTGCAGCAGAGGCATTGAATGGTGTGAAGATGGAGTTGGTTG
ATGCTGCATTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
GAGGCATGCACTGGGGTCAATATTGCCGTTATGGTTGGTGGCTTTCCAAG
AAAAGAAGGAATGGAGAGAAAAGATGTGATGTCAAAGAACGTTTCAATCT
ACAAGGCTCAGGCTTCTGCCCTGGAGCAGCACGCAGCTCCGAACTGCAAG
GTTCTAGTTGTCGCTAACCCTGCAAACACCAATGCATTGATTCTGAAAGA
ATTTGCGCCATCAATCCCTGCTAAGAACATTACATGCTTGACCAGATTGG
ATCATAACAGGGCATTGGGACAAATATCTGAGAAACTGAATGTCCAAGTA
TCTGATGTTAAGAATGTGATTATTTGGGGAAATCATTCATCATCTCAGTA
CCCTGATGTCAACCATGCAACTGTNCATACTGCAGCTGGGGAAAAGCCTG
TCCGTGAGCTTGTCAAGGATGATGCATGGTTGAATGGAAATTCATAACAC
GNCCCAACAACGTGGTGCTGAATCATCAAAGCAGAAAGTCTCCAGGGCTC
TGCTGTGCTACTCTGCTGTGACATATTCCGGATTGGTTCTTGGACTCTGA
GGCACTTGGGCTCATGG
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