EY756378

Overview
NameEY756378
Unique NameEY756378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEPBJ (Malate dehydrogenase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=mdh PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47
Identity = 102/218 (46.79%), Postives = 137/218 (62.84%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            V+V VTGAAGQIGY+L+  IA G M GTD  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GMER D++  N  I+  Q  A+E++AA + +VLVV NP NTN LI    A  IP+     +T+LD NRA  Q++ K  V V +V ++ IWGNHSS+QYPD  +A +      KPV +++ D  WL G+
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGTDTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDIAFKDINWALLVGSVPRKAGMERGDLLKINGGIFINQGKAIEKNAASDVRVLVVGNPCNTNCLIAMNNAKGIPSDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSSTQYPDFYNAKI----SGKPVTDVISDHEWLKGD 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEGPC (Malate dehydrogenase OS=Legionella pneumophila (strain Corby) GN=mdh PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.972e-47
Identity = 98/220 (44.55%), Postives = 136/220 (61.82%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M    VRV VTGAAGQIGYALV  IA G M G +  V L++L++ PA  +L GV MEL D AFPLLK +V T D  +A  GVN A++VG  PRK+GMER D++  N  I+  Q  A+  +A+ + +V VV NP NTN LI    A  +P+     +T LD  RA  Q+++K  V ++ V  + IWGNHS++QYPD  +A ++  +      +++ D+ WL
Sbjct:    1 MINNRVRVAVTGAAGQIGYALVFRIASGQMFGPNTEVELNLLELEPALPSLEGVAMELDDCAFPLLKRIVCTADLNKAMDGVNWALLVGSVPRKQGMERSDLLQINGGIFTKQGQAINDYASDDVRVFVVGNPCNTNCLIAMNHAKDVPSDRFYAMTTLDELRARTQLAKKAGVDITAVTQMTIWGNHSATQYPDFYNAKINGTS----AAQVINDETWL 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEGPL (Malate dehydrogenase OS=Legionella pneumophila (strain Lens) GN=mdh PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.041e-46
Identity = 98/220 (44.55%), Postives = 135/220 (61.36%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M    VRV VTGAAGQIGYALV  IA G M G +  V L++L++ PA  +L GV MEL D AFPLLK +V T D  +A  GVN A++VG  PRK+GMER D++  N  I+  Q  A+  +A+ + +V VV NP NTN LI    A  +P+     +T LD  RA  Q+++K  V ++ V  + IWGNHS++QYPD  +A ++  +  +    ++ D  WL
Sbjct:    1 MTNNRVRVAVTGAAGQIGYALVFRIASGQMFGPNTEVELNLLELEPALPSLEGVAMELDDCAFPLLKRIVCTADLNKAMDGVNWALLVGSVPRKQGMERSDLLQINGGIFTKQGQAINDYASDDVRVFVVGNPCNTNCLIAMNHAKDVPSDRFYAMTTLDELRARTQLAKKAGVDITAVTQMTIWGNHSATQYPDFYNAKINGTSAAR----VINDQTWL 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_CORJK (Malate dehydrogenase OS=Corynebacterium jeikeium (strain K411) GN=mdh PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.151e-45
Identity = 99/216 (45.83%), Postives = 138/216 (63.89%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLN 735
            V V VTGA GQIGY+L+  IA+G + G D+ V L +L+     +A  GV +EL D AFPLL  V  TT+  E     N   +VG  PR++G ER D+++ N  I+  Q  A+ ++AA + +V+VV NPANTNA I+   A  +  + +T LTRLDHNR L Q+++KL V V D+KN+ +WGNHS+SQ+PDV   T++   GEK   +L  D AW+N
Sbjct:    9 VTVTVTGAGGQIGYSLLFRIAKGEVFG-DRVVNLRLLETEQGVQAARGVALELADCAFPLLGEVSITTELSEGFKDANAVFLVGAKPRQKGEERADLLAANGKIFGPQGKAIAEYAADDVRVIVVGNPANTNAAIVAAHAEGLDPRRVTALTRLDHNRGLAQVADKLGVAVRDLKNMTVWGNHSASQFPDVAELTLN---GEKVADKL--DAAWVN 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEPIN (Malate dehydrogenase OS=Leptospira interrogans GN=mdh PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.273e-44
Identity = 98/218 (44.95%), Postives = 133/218 (61.01%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            V+V VTGAAGQIGY+L+  IA G M G D  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GMER D++  N  I+  Q  A+E++AA + ++LVV NP NTN LI    A  I       +T+LD NRA  Q++ K  V V +V ++ IWGNHS++QYPD      +T    KPV +++ D  WL G+
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDF----YNTKISGKPVTDVISDHEWLKGD 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_LEPIC (Malate dehydrogenase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=mdh PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.273e-44
Identity = 98/218 (44.95%), Postives = 133/218 (61.01%), Query Frame = 1
Query:   88 VRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            V+V VTGAAGQIGY+L+  IA G M G D  V + ML++  A  A  GV MEL D AFPLL+ V  ++D   A   +N A++VG  PRK GMER D++  N  I+  Q  A+E++AA + ++LVV NP NTN LI    A  I       +T+LD NRA  Q++ K  V V +V ++ IWGNHS++QYPD      +T    KPV +++ D  WL G+
Sbjct:    5 VKVAVTGAAGQIGYSLLFRIASGQMFGADTAVEIQMLELEAAIPAAKGVIMELEDCAFPLLQKVTVSSDLDTAFKEINWALLVGSVPRKAGMERGDLLKINGGIFVNQGKAIEKNAASDVRILVVGNPCNTNCLIAMNNAKGISQDRWFAMTKLDENRAKSQLASKAGVPVKEVTHLGIWGNHSATQYPDF----YNTKISGKPVTDVISDHEWLKGD 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDHP_SPIOL (Malate dehydrogenase [NADP], chloroplastic OS=Spinacia oleracea GN=MDH PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.347e-43
Identity = 97/218 (44.50%), Postives = 129/218 (59.17%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            K+ + + ++GAAG I   L+  +A GV+ G DQP+ L +L    +  AL GV MEL D+ +PLL+ V    D  E       A+++G  PR  GMER D++  N  IY  Q  AL   A+PN KV+VV NP NTNALI  +  P+IPAKN   LTRLD NRA  Q++ K  V    V NV IWGNHS++Q PD  +A +    G  PV+E++K   WL
Sbjct:   89 KKMITIAISGAAGTISNHLLFKLASGVVFGPDQPIALKLLGSEKSFHALEGVAMELEDSLYPLLREVSIGIDPYEVFEDAEWALLIGAKPRGPGMERADLLDINGKIYAEQGKALNAVASPNVKVIVVGNPCNTNALICLKNPPNIPAKNFHSLTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFVNAQI----GGVPVKEVIKAQKWL 302          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_PARUW (Malate dehydrogenase OS=Protochlamydia amoebophila (strain UWE25) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.984e-43
Identity = 88/217 (40.55%), Postives = 131/217 (60.37%), Query Frame = 1
Query:   82 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            +P+++ ++G AGQI Y+L+  +A G + G +Q + L +L++P A  AL GVKME+ D AFPLL  +   +D  +A   ++ A+++G   R  GMER+D++ +N  I+  Q  AL   A  + K+ VV NP NTN LI    APS+  +N   +TRLD NRA   +S+K  V   DV  V IWGNHS++Q PD  +A +     +KPV  ++ D  WL
Sbjct:    3 QPIKIAISGGAGQIAYSLLFRLASGELFGPNQLIELQVLEVPNALSALEGVKMEIEDCAFPLLSSIKICSDPYQAFEDIDYALLIGAKSRGPGMERRDLLQENSKIFVNQGQALNAVAKSSAKIFVVGNPCNTNCLIALNNAPSLKRENFYAMTRLDQNRATFFLSQKSQVSTKDVSCVTIWGNHSATQVPDFVNAKI----SQKPVETIIPDRQWL 215          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_MAGSM (Malate dehydrogenase OS=Magnetococcus sp. (strain MC-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.466e-42
Identity = 97/217 (44.70%), Postives = 131/217 (60.37%), Query Frame = 1
Query:   82 EPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            +P+RV VTGAAGQI Y+L+  +A G + G D+ V L +L+IP A   L GV MEL D AFP L  V A  +  +A  G+N  +MVG  PR  GMER D++  N  I+  Q  AL + AA + + +VV NP NTN +I    +  +P +  + + RLD NRA   ++ K   QV DV NV+IWGNHS++Q PD   A +    G KPV E++ D AWL
Sbjct:    3 DPIRVAVTGAAGQIAYSLLVRLASGQLFGKDRKVELKLLEIPQAMGPLEGVMMELQDCAFPTLAKVEAFDNPEQAFDGINWCLMVGSRPRGPGMERSDLIKINGPIFVNQGKALNR-AAQDVRAVVVGNPCNTNCMIAAHNS-DVPHERFSAMMRLDQNRAKYLLASKAGAQVIDVTNVVIWGNHSNNQVPDFEFAKI----GGKPVPEVIADAAWL 213          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDHP_FLABI (Malate dehydrogenase [NADP], chloroplastic OS=Flaveria bidentis PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.466e-42
Identity = 97/218 (44.50%), Postives = 128/218 (58.72%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            K+ + V V+GAAG I   L+  +A G + G DQP+ L +L    +  AL GV MEL D+ +PLL+ V    D  E       A+++G  PR  GMER D++  N  I+  Q  AL   A+PN KV+VV NP NTNALI  + AP+IP KN   LTRLD NRA  Q++ K  V    V NV IWGNHS++Q PD  +A +H      PV E+++D  WL
Sbjct:  108 KKIINVAVSGAAGMISNHLLFKLASGEVFGPDQPISLKLLGSERSFAALEGVAMELEDSLYPLLRQVSIGIDPYEIFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALICLKNAPNIPPKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIHGI----PVTEVIRDRKWL 321          
The following BLAST results are available for this feature:
BLAST of EY756378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MDH_LEPBJ7.972e-4746.79Malate dehydrogenase OS=Leptospira borgpetersenii ... [more]
MDH_LEGPC7.972e-4744.55Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH_LEGPL1.041e-4644.55Malate dehydrogenase OS=Legionella pneumophila (st... [more]
MDH_CORJK1.151e-4545.83Malate dehydrogenase OS=Corynebacterium jeikeium (... [more]
MDH_LEPIN1.273e-4444.95Malate dehydrogenase OS=Leptospira interrogans GN=... [more]
MDH_LEPIC1.273e-4444.95Malate dehydrogenase OS=Leptospira interrogans ser... [more]
MDHP_SPIOL5.347e-4344.50Malate dehydrogenase [NADP], chloroplastic OS=Spin... [more]
MDH_PARUW6.984e-4340.55Malate dehydrogenase OS=Protochlamydia amoebophila... [more]
MDH_MAGSM3.466e-4244.70Malate dehydrogenase OS=Magnetococcus sp. (strain ... [more]
MDHP_FLABI3.466e-4244.50Malate dehydrogenase [NADP], chloroplastic OS=Flav... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756378 ID=EY756378; Name=EY756378; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTTCTCTCGCTTTACTGGAAAAATCTTTTCGTTTCCTGT
GATACATCTCTGATCCGAACTAATGGCCAAGGAACCAGTTCGCGTTCTCG
TCACCGGCGCCGCAGGGCAAATTGGATATGCACTTGTCCCCATGATTGCT
AGGGGAGTGATGTTGGGTACTGACCAGCCTGTGATTCTGCACATGCTTGA
TATCCCACCTGCAGCAGAGGCATTGAATGGTGTGAAGATGGAGTTGGTTG
ATGCTGCATTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
GAGGCATGCACTGGGGTCAATATTGCCGTTATGGTTGGTGGCTTTCCAAG
AAAAGAAGGAATGGAGAGAAAAGATGTGATGTCAAAGAACGTTTCAATCT
ACAAGGCTCAGGCTTCTGCCCTGGAGCAGCACGCAGCTCCGAACTGCAAG
GTTCTAGTTGTCGCTAACCCTGCAAACACCAATGCATTGATTCTGAAAGA
ATTTGCGCCATCAATCCCTGCTAAGAACATTACATGCTTGACCAGATTGG
ATCATAACAGGGCATTGGGACAAATATCTGAGAAACTGAATGTCCAAGTA
TCTGATGTTAAGAATGTGATTATTTGGGGAAATCATTCATCATCTCAGTA
CCCTGATGTCAACCATGCAACTGTNCATACTGCAGCTGGGGAAAAGCCTG
TCCGTGAGCTTGTCAAGGATGATGCATGGTTGAATGGAAATTCATAACAC
GNCCCAACAACGTGGTGCTGAATCATCAAAGCAGAAAGTCTCCAGGGCTC
TGCTGTGCTACTCTGCTGTGACATATTCCGGATTGGTTCTTGGACTCTGA
GGCACTTGGGCTCATGG
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