EY756378

Overview
NameEY756378
Unique NameEY756378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.004e-57
Identity = 116/220 (52.73%), Postives = 151/220 (68.64%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M + PV V VTGAAGQIGYAL+  IA G +LG D PV L +L+I PA +A  G  MEL D AFPLL+G+  T D   A  G N+ ++VG  PR +GMER D++S N  I+K Q  A+  +AA + K+LVV NPANTNALI +  AP +PA+  T +TRLDHNRAL Q+++K    V+D+K + IWGNHS++QYPD+ HA+V   AG K   E+V D+ WL
Sbjct:    1 MTRTPVNVTVTGAAGQIGYALLFRIASGQLLGADVPVKLRLLEITPALKAAEGTAMELDDCAFPLLQGIDITDDPNVAFDGTNVGLLVGARPRTKGMERGDLLSANGGIFKPQGKAINDNAADDVKILVVGNPANTNALIAQAAAPDVPAERFTAMTRLDHNRALTQLAKKTGSTVADIKRLTIWGNHSATQYPDIFHASV---AG-KNAAEVVNDEKWL 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.311e-57
Identity = 127/260 (48.85%), Postives = 163/260 (62.69%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            K+PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+I PA +AL GV MEL D A+PLL  VV + D + A    + A++VG  PRK GMER D++  N  I+K Q  AL Q A+ + KVLVV NPANTNALI ++ AP +  +  T + RLDHNRA+ Q++EK    VS +KN+ IWGNHSS+QYPD++ ATV    G +P  +LV D  W      + PT       II+A     +A      I  +  W L
Sbjct:    4 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVVMELRDGAYPLLADVVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGQALNQVASRDVKVLVVGNPANTNALIAQQNAPDLDPRQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATV----GGRPALDLV-DRTWYEQE--YIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWAL 256          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_BURP8 (Malate dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mdh PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.311e-57
Identity = 127/268 (47.39%), Postives = 163/268 (60.82%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK   RV VTGAAGQIGY+L+  IA G MLG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q  AL + A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    VS ++ +++WGNHS + YPD   AT    A  + + +L+ D+ W N N+   PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MAKPAKRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVSSIEKLVVWGNHSPTMYPDFRVAT----AEGQDLTKLINDEEW-NRNT-FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKW 262          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_FRASC (Malate dehydrogenase OS=Frankia sp. (strain CcI3) GN=mdh PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.712e-57
Identity = 114/220 (51.82%), Postives = 148/220 (67.27%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M+  PV V VTGAAGQIGYAL+  IA G +LG D PV L +L+IP A  A  G  +EL D+AFPLL GV    DA  A  G N+A++VG  PR +GMER D++S N  I+K Q  A+   AA + +VLVV NPANTNALI +  AP +PA+  T +TRLDHNRA+ Q+++KL V  +++K + IWGNHS++QYPD+ HA V    G +   E V D AW+
Sbjct:    1 MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVKLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIKKITIWGNHSATQYPDIFHAEV----GGRSGAEAVGDQAWI 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.921e-57
Identity = 126/260 (48.46%), Postives = 155/260 (59.62%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            K PVRV VTGAAGQI Y+L+  IA G MLG DQPVIL ML+I PA EAL GV MEL D AFPLL  +V T DA  A    + A++VG  PR  GMER D++  N +I+  Q  A+  HA+   KVLVV NPANTNALI +  AP I  +  T +TRLDHNR + Q++ KL+V ++D+  + IWGNHSS+QYPD+ HA V   A    V     D  W      + PT       IIKA     +A      IF +  W L
Sbjct:    2 KAPVRVTVTGAAGQISYSLLFRIAAGEMLGADQPVILQMLEITPALEALKGVAMELDDCAFPLLHSMVCTDDANVAFKDSDYALLVGARPRGPGMERNDLLEANAAIFSVQGKAINDHASRGIKVLVVGNPANTNALIAQRNAPDIDPRQFTAMTRLDHNRGMSQLASKLDVSINDITKMTIWGNHSSTQYPDLYHALVKGDAAIDKV-----DSTWYAEE--YIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWAL 254          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_AKKM8 (Malate dehydrogenase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=mdh PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.921e-57
Identity = 114/221 (51.58%), Postives = 147/221 (66.52%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGN 741
            K P+ V VTGAAGQI Y+L+  IA G MLG DQP+ L +L+IPPA  AL GV MEL DAAFPL+  +V T+D  EA  G N  ++VG  PRK GMERKD++  N  ++  Q  A+ + AA + +VLVV NP NTNALI    A  +P+     +TRLD NRA  Q++EK  V V++V N+ IWGNHSS+QYPD  +A +    G KPV E++KD  WL G+
Sbjct:    2 KTPITVTVTGAAGQIAYSLLFRIASGSMLGPDQPINLRLLEIPPAMNALEGVVMELRDAAFPLVNEIVPTSDPDEAFAGANWCLLVGSVPRKAGMERKDLLDINGKVFIGQGQAIARSAAKDVRVLVVGNPCNTNALIAMHNASGVPSDRFFAMTRLDENRAKSQLAEKAGVHVTEVTNMAIWGNHSSTQYPDFTNARI----GGKPVTEVIKDTEWLKGD 218          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.982e-57
Identity = 128/270 (47.41%), Postives = 164/270 (60.74%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            M+K  +RV VTGAAGQIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV MEL D AFPLL+ V A  D   A    ++A++VG  PR  GMERKD+++ N  I+ AQ  AL + A+ N KVLVV NPANTNA I  + AP +PAKN T + RLDHNRAL Q++ K    V+ ++ +I+WGNHS + YPD   ATV      +P+ +L+ D+AW        PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MSKPAMRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVIMELEDCAFPLLQEVTAHADPKTAFKDADVALLVGARPRGPGMERKDLLTVNAQIFTAQGRALNEVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLAGKSGKAVAGIEKLIVWGNHSPTMYPDYRFATV----DGQPLAKLINDEAW--NRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSNGKW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_RALME (Malate dehydrogenase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=mdh PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.507e-57
Identity = 123/262 (46.95%), Postives = 160/262 (61.07%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            MAK P+RV VTGAAGQIGY+L+  IA G MLG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++  N  I+  Q  AL++ A+ + KVLVV NPANTNA I  + AP++  +N T + RLDHNRAL QI+ K    VS ++ + +WGNHS + Y D  +ATV      K V++++ D  W   N    PT       II+A  L  +A      I  +  W L
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLEANAQIFTVQGKALDEVASRDVKVLVVGNPANTNAYIAMKSAPNLKRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKMFVWGNHSPTMYADYRYATV----DGKSVKDMINDPVW--NNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVHDWVL 256          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.498e-57
Identity = 125/260 (48.08%), Postives = 158/260 (60.77%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            K PVRV VTGAAGQI Y+L+  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL G+V T D   A    + A++VG  PR  GMERKD+++ N +I+  Q  A+  HA+ N KVLVV NPANTNALI +  AP I  +  T +TRLDHNRAL Q++ K    ++++   +IWGNHSS+QYPD++    +T    KP   LV D AW   +  + PT       II A     +A      I  I  W L
Sbjct:    2 KAPVRVTVTGAAGQISYSLLFRIAAGDMLGKDQPVILQLLEITPALKALQGVAMELDDCAFPLLAGIVTTDDPSVAFKDSDYALLVGARPRGPGMERKDLLAANAAIFSVQGKAINDHASKNIKVLVVGNPANTNALIAQRNAPDISPRQFTAMTRLDHNRALSQLATKTGTSINNITKALIWGNHSSTQYPDLH----NTLVDGKPALSLV-DQAWYESD--YIPTVQQRGAAIIAARGASSAASAANAAINHIRDWAL 254          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.110e-56
Identity = 126/260 (48.46%), Postives = 163/260 (62.69%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            K+PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+I PA +AL GV MEL D AFPLL  +V + D + A    + A++VG  PRK GMER D++  N  I+K Q  AL + A+ + KVLVV NPANTNALI ++ AP +  K  T + RLDHNRA+ Q++EK    VS +KN+ IWGNHSS+QYPD++ ATV+     +P  +LV D  W      + PT       II+A     +A      I  +  W L
Sbjct:    8 KQPVRVAVTGAAGQIGYSLLFRIAAGDMLGKDQPVILQLLEITPALKALAGVVMELRDCAFPLLADIVTSDDPLVAFKDADYALLVGAMPRKAGMERGDLLGANGGIFKPQGEALNKVASRDVKVLVVGNPANTNALIAQQNAPDLDPKQFTAMVRLDHNRAISQLAEKTGQPVSAIKNITIWGNHSSTQYPDLSQATVN----GQPALDLV-DREWYEKE--YIPTVAKRGAAIIEARGASSAASAASAAIDHMRDWAL 260          
The following BLAST results are available for this feature:
BLAST of EY756378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MDH_STRAW1.004e-5752.73Malate dehydrogenase OS=Streptomyces avermitilis G... [more]
MDH_DEIDV1.311e-5748.85Malate dehydrogenase OS=Deinococcus deserti (strai... [more]
MDH_BURP81.311e-5747.39Malate dehydrogenase OS=Burkholderia phymatum (str... [more]
MDH_FRASC1.712e-5751.82Malate dehydrogenase OS=Frankia sp. (strain CcI3) ... [more]
MDH_TERTT2.921e-5748.46Malate dehydrogenase OS=Teredinibacter turnerae (s... [more]
MDH_AKKM82.921e-5751.58Malate dehydrogenase OS=Akkermansia muciniphila (s... [more]
MDH_BORA14.982e-5747.41Malate dehydrogenase OS=Bordetella avium (strain 1... [more]
MDH_RALME6.507e-5746.95Malate dehydrogenase OS=Ralstonia metallidurans (s... [more]
MDH_CELJU8.498e-5748.08Malate dehydrogenase OS=Cellvibrio japonicus (stra... [more]
MDH_DEIGD1.110e-5648.46Malate dehydrogenase OS=Deinococcus geothermalis (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756378 ID=EY756378; Name=EY756378; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTTCTCTCGCTTTACTGGAAAAATCTTTTCGTTTCCTGT
GATACATCTCTGATCCGAACTAATGGCCAAGGAACCAGTTCGCGTTCTCG
TCACCGGCGCCGCAGGGCAAATTGGATATGCACTTGTCCCCATGATTGCT
AGGGGAGTGATGTTGGGTACTGACCAGCCTGTGATTCTGCACATGCTTGA
TATCCCACCTGCAGCAGAGGCATTGAATGGTGTGAAGATGGAGTTGGTTG
ATGCTGCATTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
GAGGCATGCACTGGGGTCAATATTGCCGTTATGGTTGGTGGCTTTCCAAG
AAAAGAAGGAATGGAGAGAAAAGATGTGATGTCAAAGAACGTTTCAATCT
ACAAGGCTCAGGCTTCTGCCCTGGAGCAGCACGCAGCTCCGAACTGCAAG
GTTCTAGTTGTCGCTAACCCTGCAAACACCAATGCATTGATTCTGAAAGA
ATTTGCGCCATCAATCCCTGCTAAGAACATTACATGCTTGACCAGATTGG
ATCATAACAGGGCATTGGGACAAATATCTGAGAAACTGAATGTCCAAGTA
TCTGATGTTAAGAATGTGATTATTTGGGGAAATCATTCATCATCTCAGTA
CCCTGATGTCAACCATGCAACTGTNCATACTGCAGCTGGGGAAAAGCCTG
TCCGTGAGCTTGTCAAGGATGATGCATGGTTGAATGGAAATTCATAACAC
GNCCCAACAACGTGGTGCTGAATCATCAAAGCAGAAAGTCTCCAGGGCTC
TGCTGTGCTACTCTGCTGTGACATATTCCGGATTGGTTCTTGGACTCTGA
GGCACTTGGGCTCATGG
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