EY756378

Overview
NameEY756378
Unique NameEY756378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3)

HSP 1 Score: 220.32 bits (560), Expect = 1.110e-56
Identity = 125/270 (46.30%), Postives = 162/270 (60.00%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK P+RV VTGAAGQI Y+L+  IA G MLG DQPVIL +L+IP   A +AL GV ME+ D AFPLL G+ A  D + A    ++A++VG  PR  GMERKD++  N  I+  Q  A++  A+ N KVLVV NPANTNA I  + APS+PAKN T + RLDHNRAL QI+ K    VS ++ + +WGNHS + Y D  +A +  A+    V++++ DDAW        PT       II A  +  +A      I  I  W L   G W
Sbjct:    1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGAS----VKDMINDDAW--NRDTFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.110e-56
Identity = 123/257 (47.86%), Postives = 158/257 (61.48%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTTWC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            K PVRV VTGAAGQIGY+L+  IA G MLG DQPVIL +L+I PA EAL GV MEL D AFPL+ G+  +  A EA    +IA++VG  PR  GMERKD++  N +I+ AQ  AL   A+ + KVLVV NPANTN+LI +  AP +  +N T +TRLDHNRA+ Q++ K     +++KN+IIWGNHS++QYPD++   V   A       LV+ D + N            IIKA     +A      I  I  W L
Sbjct:    2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEITPALEALKGVVMELEDCAFPLVSGITTSDKAEEAFKDADIALLVGARPRGPGMERKDLLEANAAIFSAQGKALNDAASRDVKVLVVGNPANTNSLIAQRNAPDLDPRNFTAMTRLDHNRAVAQLANKTGAHNTEIKNMIIWGNHSATQYPDISKTKVKGEAAP----GLVERDWYENDFIPTVQQRGAAIIKARGASSAASAASSAIDHIRDWVL 254          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH2_BURVG (Malate dehydrogenase 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=mdh2 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.110e-56
Identity = 126/268 (47.01%), Postives = 160/268 (59.70%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK   RV VTGAAGQI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q +AL + A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    V+ ++ + +WGNHS + YPD   A   TA GE  ++ LV DD W        PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELEDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKTGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGESMLK-LVNDDVW--NRETFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKW 262          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH1_BURTA (Malate dehydrogenase 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh1 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.110e-56
Identity = 126/268 (47.01%), Postives = 161/268 (60.07%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK   RV VTGAAGQI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q +AL + A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    V+ ++ + +WGNHS + YPD   A   TA GE  + +L+ DDAW        PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDAW--NRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKW 262          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_JANMA (Malate dehydrogenase OS=Janthinobacterium sp. (strain Marseille) GN=mdh PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.450e-56
Identity = 125/270 (46.30%), Postives = 163/270 (60.37%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK P+RV VTGAAGQIGY+L+  IA G +LG DQPVIL +L+I    A +AL GV ME+ D AFPLL GV A +D + A    ++A++VG  PR  GMERKD++  N  I+  Q  AL+  A+ N KVLVV NPANTNA I  + AP++PAKN T + RLDHNRAL QI+ K++  V+ ++ + +WGNHS + YPD   AT    A  K V+E + D+ W        PT       II A  +  +A      I  +  W L   G W
Sbjct:    1 MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIADEKAQKALKGVIMEIDDCAFPLLAGVTAHSDPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKALDAVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQIAAKISKPVTSIEKLTVWGNHSPTMYPDYRFAT----ADGKSVKEAINDEVW--NKDVFLPTVGKRGAAIIDARGVSSAASAANAAIDHVRDWVLGTNGKW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.450e-56
Identity = 112/220 (50.91%), Postives = 147/220 (66.82%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M+  PV V VTGAAGQIGYAL+  IA G +LG D PV L +L+IP A  A  G  +EL D+AFPLL GV    DA  A  G N+A++VG  PR +GMER D++S N  I+K Q  A+   AA + +VLVV NPANTNALI +  AP +PA+  T +TRLDHNRA+ Q+++KL V  ++++ + IWGNHS++QYPD+ HA V    G +   E V D  W+
Sbjct:    1 MSSTPVNVTVTGAAGQIGYALLFRIASGQLLGADTPVRLRLLEIPQAVRAAEGTALELEDSAFPLLAGVDVFDDAKRAFEGTNVALLVGARPRTKGMERGDLLSANGGIFKPQGEAINSGAAEDIRVLVVGNPANTNALIAQTHAPDVPAERFTAMTRLDHNRAIAQLAKKLGVPSAEIRKITIWGNHSATQYPDIFHAQV----GGRSGAEAVGDQKWI 216          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_BURM1 (Malate dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=mdh PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.450e-56
Identity = 127/268 (47.39%), Postives = 163/268 (60.82%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK   RV VTGAAGQI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q +AL + A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    V+ ++ + +WGNHS + YPD   A   TA GE  + +L+ DD W N N+   PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQAAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDEW-NRNT-FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKW 262          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.893e-56
Identity = 125/260 (48.08%), Postives = 158/260 (60.77%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            K PVRV VTGAAGQI Y+L+  IA G MLG DQPVIL ML+I PA EAL GV MEL D AFPLL G+V + D   A    + A++VG  PR  GMERKD++  N +I+  Q  A+  HA+ + KVLVV NPANTNALI +  AP I  +  T + RLDHNR L Q++ KL+V + D+  + IWGNHS++QYPD+ H  V    G+  V ++ KD  W   +    PT       IIKA     +A      IF +  W L
Sbjct:    2 KAPVRVAVTGAAGQISYSLLFRIAAGEMLGKDQPVILQMLEITPALEALKGVAMELDDCAFPLLAGMVCSDDPNVAFKDADYALLVGARPRGPGMERKDLLEANAAIFSVQGKAINDHASRDIKVLVVGNPANTNALIAQRNAPDINPRQFTAMMRLDHNRGLSQLAAKLDVTLEDITKMTIWGNHSATQYPDLFHTLV---KGDVAVEQVEKD--WYEND--FIPTVQQRGAAIIKARGASSAASAANAAIFHMRDWAL 254          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.893e-56
Identity = 125/264 (47.35%), Postives = 161/264 (60.98%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTL 849
            MAK P+RV VTGAAGQIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV ME+ D AFPLL G+ A  D + A   V++A++VG  PR  GMERKD++S N  I+ AQ  AL   A+ N KVLVV NPANTNA I  + AP +P +N T + RLDHNRAL QI+ K    VS ++ + +WGNHS + Y D  +AT+      + V++++ D  W   N    PT       II+A  L  +A      I  +  W L
Sbjct:    1 MAKAPMRVAVTGAAGQIGYALLFRIAAGEMLGKDQPVILQLLEIPDEKAQKALKGVMMEIEDCAFPLLAGMEAHADPMTAFKDVDVALLVGARPRGPGMERKDLLSANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPRENFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYATI----DGQSVKDMINDPVW--NNDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVL 258          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_DIAST (Malate dehydrogenase OS=Diaphorobacter sp. (strain TPSY) GN=mdh PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.893e-56
Identity = 128/270 (47.41%), Postives = 159/270 (58.89%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            M+K+PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L+IP   A  AL GV MEL D AFPLL G+ A +D + A    + A++VG  PR  GMER D+++ N  I+ AQ  AL   A+ N KVLVV NPANTNA I  + AP +PAKN T + RLDHNRA  Q++ K   +V D+K + +WGNHS + Y D   ATV      K V++ + D AW        PT       II A  L  +A      I  +  W L   G W
Sbjct:    1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQNALKGVIMELEDCAFPLLAGIEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQLAAKGGFKVGDIKKLTVWGNHSPTMYADYRFATV----DGKSVKDAINDQAW--NKDVFLPTVGKRGAAIIAARGLSSAASAANAAIDHMRDWALGSKGEW 264          
The following BLAST results are available for this feature:
BLAST of EY756378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MDH_AQUAR1.110e-5646.30Malate dehydrogenase OS=Aquaspirillum arcticum GN=... [more]
MDH_ALHEH1.110e-5647.86Malate dehydrogenase OS=Alkalilimnicola ehrlichei ... [more]
MDH2_BURVG1.110e-5647.01Malate dehydrogenase 2 OS=Burkholderia vietnamiens... [more]
MDH1_BURTA1.110e-5647.01Malate dehydrogenase 1 OS=Burkholderia thailandens... [more]
MDH_JANMA1.450e-5646.30Malate dehydrogenase OS=Janthinobacterium sp. (str... [more]
MDH_FRAAA1.450e-5650.91Malate dehydrogenase OS=Frankia alni (strain ACN14... [more]
MDH_BURM11.450e-5647.39Malate dehydrogenase OS=Burkholderia multivorans (... [more]
MDH_SACD21.893e-5648.08Malate dehydrogenase OS=Saccharophagus degradans (... [more]
MDH_RALSO1.893e-5647.35Malate dehydrogenase OS=Ralstonia solanacearum GN=... [more]
MDH_DIAST1.893e-5647.41Malate dehydrogenase OS=Diaphorobacter sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756378 ID=EY756378; Name=EY756378; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTTCTCTCGCTTTACTGGAAAAATCTTTTCGTTTCCTGT
GATACATCTCTGATCCGAACTAATGGCCAAGGAACCAGTTCGCGTTCTCG
TCACCGGCGCCGCAGGGCAAATTGGATATGCACTTGTCCCCATGATTGCT
AGGGGAGTGATGTTGGGTACTGACCAGCCTGTGATTCTGCACATGCTTGA
TATCCCACCTGCAGCAGAGGCATTGAATGGTGTGAAGATGGAGTTGGTTG
ATGCTGCATTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
GAGGCATGCACTGGGGTCAATATTGCCGTTATGGTTGGTGGCTTTCCAAG
AAAAGAAGGAATGGAGAGAAAAGATGTGATGTCAAAGAACGTTTCAATCT
ACAAGGCTCAGGCTTCTGCCCTGGAGCAGCACGCAGCTCCGAACTGCAAG
GTTCTAGTTGTCGCTAACCCTGCAAACACCAATGCATTGATTCTGAAAGA
ATTTGCGCCATCAATCCCTGCTAAGAACATTACATGCTTGACCAGATTGG
ATCATAACAGGGCATTGGGACAAATATCTGAGAAACTGAATGTCCAAGTA
TCTGATGTTAAGAATGTGATTATTTGGGGAAATCATTCATCATCTCAGTA
CCCTGATGTCAACCATGCAACTGTNCATACTGCAGCTGGGGAAAAGCCTG
TCCGTGAGCTTGTCAAGGATGATGCATGGTTGAATGGAAATTCATAACAC
GNCCCAACAACGTGGTGCTGAATCATCAAAGCAGAAAGTCTCCAGGGCTC
TGCTGTGCTACTCTGCTGTGACATATTCCGGATTGGTTCTTGGACTCTGA
GGCACTTGGGCTCATGG
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