EY756378

Overview
NameEY756378
Unique NameEY756378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_BURCA (Malate dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=mdh PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.217e-56
Identity = 125/268 (46.64%), Postives = 160/268 (59.70%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK   RV VTGAAGQI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q +AL + A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    V+ ++ + +WGNHS + YPD   A   TA GE  + +L+ DD W        PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLAGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGAALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRFA---TAEGES-LLKLINDDVW--NRDTFIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKW 262          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_ACIAC (Malate dehydrogenase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=mdh PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.217e-56
Identity = 126/270 (46.67%), Postives = 161/270 (59.63%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            M+K+PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV MEL D AFPLL G+ A +D + A    + A++VG  PR  GMER D+++ N  I+ AQ  AL   A+ N KVLVV NPANTNA I  + AP +PAKN T + RLDHNRA  QI+ K   +V +++ + +WGNHS + Y D   AT+    G K V++ + D  W        PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLAGMEAHSDPMTAFKDTDYALLVGARPRGPGMERADLLAANAQIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRAASQIAAKTGGKVGEIEKLTVWGNHSPTMYADYRFATI----GGKSVKDAINDQVW--NADVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGSNGKW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_XANC5 (Malate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mdh PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.508e-56
Identity = 130/268 (48.51%), Postives = 159/268 (59.33%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++P   A  AL GV MEL D AFPLL G+V T DA  A   V+IA++VG  PR  GMERKD++  N  I+ AQ +AL + A  + KVLVV NPANTNA I  + AP +  KN T + RLDHNRAL Q+S KL   V+ ++ + +WGNHS + YPD   AT   A+    V + + D  W    S   PT       II+A  L  +A      I  I  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDVDIALLVGSRPRGPGMERKDLLLANAEIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLDPKNFTAMLRLDHNRALSQLSAKLGKPVAGIEKLAVWGNHSPTMYPDYRFATADGAS----VGDAINDQEW--NASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGTNGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_COXBU (Malate dehydrogenase OS=Coxiella burnetii GN=mdh PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.508e-56
Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            MAK  V+V VTGAAGQIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +V T+D   A   VN A++VG  PRK GMERKD++ KN SI+  Q  A+ ++AA + ++ VV NP NTN LI    AP IP      +TRLD NRA+GQ++ K  V V  VKN+IIWGNHSS+QYPD  HAT+      KP  E+++D  WL
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATI----DGKPATEVIRDKNWL 215          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_COXBR (Malate dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=mdh PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.508e-56
Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            MAK  V+V VTGAAGQIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +V T+D   A   VN A++VG  PRK GMERKD++ KN SI+  Q  A+ ++AA + ++ VV NP NTN LI    AP IP      +TRLD NRA+GQ++ K  V V  VKN+IIWGNHSS+QYPD  HAT+      KP  E+++D  WL
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATI----DGKPATEVIRDKNWL 215          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_COXB2 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=mdh PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.508e-56
Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            MAK  V+V VTGAAGQIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +V T+D   A   VN A++VG  PRK GMERKD++ KN SI+  Q  A+ ++AA + ++ VV NP NTN LI    AP IP      +TRLD NRA+GQ++ K  V V  VKN+IIWGNHSS+QYPD  HAT+      KP  E+++D  WL
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATI----DGKPATEVIRDKNWL 215          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_COXB1 (Malate dehydrogenase OS=Coxiella burnetii (strain CbuK_Q154) GN=mdh PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.508e-56
Identity = 116/220 (52.73%), Postives = 145/220 (65.91%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            MAK  V+V VTGAAGQIGYAL+  +A G   G D  V LH+L+I PA  AL GV MEL D AFPLL+ +V T+D   A   VN A++VG  PRK GMERKD++ KN SI+  Q  A+ ++AA + ++ VV NP NTN LI    AP IP      +TRLD NRA+GQ++ K  V V  VKN+IIWGNHSS+QYPD  HAT+      KP  E+++D  WL
Sbjct:    1 MAKH-VKVAVTGAAGQIGYALLFRLASGQAFGLDTTVDLHLLEIEPALPALKGVVMELEDCAFPLLRNMVVTSDPRVAFNDVNWALLVGAAPRKAGMERKDLLEKNGSIFAGQGKAINENAASDVRIFVVGNPCNTNCLIAMNNAPDIPKDRFYAMTRLDQNRAIGQLALKAGVDVPSVKNMIIWGNHSSTQYPDFYHATI----DGKPATEVIRDKNWL 215          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.194e-56
Identity = 128/268 (47.76%), Postives = 159/268 (59.33%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++P   A  AL GV MEL D AFPLL G+V T DA  A   V++A++VG  PR  GMERKD++  N  I+ AQ +AL + A  + KVLVV NPANTNA I  + AP +  KN T + RLDHNRAL Q+S KL   V+ ++ + +WGNHS + YPD   AT   A+    + + + D  W    S   PT       II+A  L  +A      I  I  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPIEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDVDVALLVGSRPRGPGMERKDLLLANAEIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLDPKNFTAMLRLDHNRALSQLSAKLGKPVAGIEKLAVWGNHSPTMYPDYRFATADGAS----IGDAINDQEW--NASTFIPTVGKRGAAIIEARGLSSAASAANAAIDHIRDWVLGTSGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.194e-56
Identity = 125/270 (46.30%), Postives = 168/270 (62.22%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            M+K+PVRV VTGAAGQIGYA++  IA G MLG DQPVIL +L++P   A +AL GV MEL D AFPLL G+ A +D + A   V+ A+++G  PR  GMER ++++ N +I+ AQ  AL   A+ N KVLVV NPANTNA I  + AP +PAKN T + RLDHNRAL Q++ K    V+D++ + +WGNHS + Y D   AT++   GE  V++++ D  W N N+   PT       II A  +  +A      I  +  W L   G W
Sbjct:    1 MSKKPVRVAVTGAAGQIGYAILFRIASGEMLGKDQPVILQLLEVPVEKAQQALQGVMMELQDCAFPLLAGMEAHSDPMTAFKDVDYALLIGSRPRGPGMERAELLAVNGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALSQLASKTGKAVADIEKMAVWGNHSPTMYADYRFATIN---GES-VKDMINDQDW-NANT-FLPTVGKRGAAIIAARGVSSAASAANAAIDHMRDWALGTNGKW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_NITMU (Malate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mdh PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.396e-56
Identity = 115/220 (52.27%), Postives = 152/220 (69.09%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATV--HTAAGEKPVRELVKDDAWL 732
            K P+RV VTGAAGQI Y+L+  IA G MLG DQPVIL +LDIP +  +L GV MEL D AFPLL+ +  T D   A   +NIA++VG  PR +GMERKD++  N +I++AQ  AL++ A  + KVLVV NPANTNA I  + APS+   + + + RLDHNRA+ Q++ K+   VS V+ +I+WGNHSS+QYPD++HA V  H AA      +LV D AW+
Sbjct:    2 KTPIRVAVTGAAGQIAYSLLFRIAAGDMLGEDQPVILQLLDIPQSLPSLKGVVMELDDCAFPLLRDITITDDPKTAFRDINIAMLVGARPRTKGMERKDLLEANGTIFRAQGKALDEVAGRDVKVLVVGNPANTNAYITMKNAPSLKPTSFSSMMRLDHNRAVFQLAVKVGQPVSSVRKMIVWGNHSSAQYPDLSHAEVDGHNAA------DLVNDMAWI 215          
The following BLAST results are available for this feature:
BLAST of EY756378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MDH_BURCA4.217e-5646.64Malate dehydrogenase OS=Burkholderia cenocepacia (... [more]
MDH_ACIAC4.217e-5646.67Malate dehydrogenase OS=Acidovorax avenae subsp. c... [more]
MDH_XANC55.508e-5648.51Malate dehydrogenase OS=Xanthomonas campestris pv.... [more]
MDH_COXBU5.508e-5652.73Malate dehydrogenase OS=Coxiella burnetii GN=mdh P... [more]
MDH_COXBR5.508e-5652.73Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXB25.508e-5652.73Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_COXB15.508e-5652.73Malate dehydrogenase OS=Coxiella burnetii (strain ... [more]
MDH_XANAC7.194e-5647.76Malate dehydrogenase OS=Xanthomonas axonopodis pv.... [more]
MDH1_RHOFD7.194e-5646.30Malate dehydrogenase 1 OS=Rhodoferax ferrireducens... [more]
MDH_NITMU9.396e-5652.27Malate dehydrogenase OS=Nitrosospira multiformis (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756378 ID=EY756378; Name=EY756378; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTTCTCTCGCTTTACTGGAAAAATCTTTTCGTTTCCTGT
GATACATCTCTGATCCGAACTAATGGCCAAGGAACCAGTTCGCGTTCTCG
TCACCGGCGCCGCAGGGCAAATTGGATATGCACTTGTCCCCATGATTGCT
AGGGGAGTGATGTTGGGTACTGACCAGCCTGTGATTCTGCACATGCTTGA
TATCCCACCTGCAGCAGAGGCATTGAATGGTGTGAAGATGGAGTTGGTTG
ATGCTGCATTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
GAGGCATGCACTGGGGTCAATATTGCCGTTATGGTTGGTGGCTTTCCAAG
AAAAGAAGGAATGGAGAGAAAAGATGTGATGTCAAAGAACGTTTCAATCT
ACAAGGCTCAGGCTTCTGCCCTGGAGCAGCACGCAGCTCCGAACTGCAAG
GTTCTAGTTGTCGCTAACCCTGCAAACACCAATGCATTGATTCTGAAAGA
ATTTGCGCCATCAATCCCTGCTAAGAACATTACATGCTTGACCAGATTGG
ATCATAACAGGGCATTGGGACAAATATCTGAGAAACTGAATGTCCAAGTA
TCTGATGTTAAGAATGTGATTATTTGGGGAAATCATTCATCATCTCAGTA
CCCTGATGTCAACCATGCAACTGTNCATACTGCAGCTGGGGAAAAGCCTG
TCCGTGAGCTTGTCAAGGATGATGCATGGTTGAATGGAAATTCATAACAC
GNCCCAACAACGTGGTGCTGAATCATCAAAGCAGAAAGTCTCCAGGGCTC
TGCTGTGCTACTCTGCTGTGACATATTCCGGATTGGTTCTTGGACTCTGA
GGCACTTGGGCTCATGG
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