EY756378

Overview
NameEY756378
Unique NameEY756378
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_XANCB (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=mdh PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.603e-55
Identity = 126/268 (47.01%), Postives = 159/268 (59.33%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++    A  AL GV MEL D AFPLL G+V T DA  A   +++A++VG  PR  GMERKD++ +N  I+ AQ +AL + A  + KVLVV NPANTNA I  E AP +  KN T + RLDHNRAL Q+S KL   V  ++ +++WGNHS + YPD   AT   A+    + + + D  W  G     PT       II+A  L  +A      I  +  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMESAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNAGT--FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSNGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.603e-55
Identity = 124/268 (46.27%), Postives = 161/268 (60.07%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            MAK   RV VTGAAGQI Y+L+  IA G +LG DQPVIL +LD+P A  A+ GV MEL D AFPLL GVV T D   A    ++A++VG  PR +GMERKD++S N  I+  Q  AL + A+ + KVLVV NPANTNA I  + AP +P KN T + RLDHNRAL Q++ K    V+ ++ + +WGNHS + YPD   AT    A  + + +L+ D+ W N N+   PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MAKPAKRVAVTGAAGQIAYSLLFRIANGDLLGKDQPVILQLLDLPQAQGAVKGVVMELDDCAFPLLSGVVITDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEVASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVASIEKLAVWGNHSPTMYPDFRVAT----AEGQDLTKLINDEEW-NRNT-FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGTNGKW 262          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_STRMK (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=mdh PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.093e-55
Identity = 126/268 (47.01%), Postives = 161/268 (60.07%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++P   A  AL GV MEL D AFPLL G+V T DA  A    +IA++VG  PR  GMERKD++ +N  I+ AQ +AL + A+ + KVLVV NPANTNA I  + AP +  +N T + RLDHNRAL Q+S KL   V  ++ +++WGNHS + YPD   AT   A+    + + + D  W N N+   PT       II+A     +A      I  +  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSTKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGAS----IADAINDQEW-NANT-FIPTVGKRGAAIIEARGSSSAASAANAAIDHVRDWVLGSNGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_STRM5 (Malate dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=mdh PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.093e-55
Identity = 126/268 (47.01%), Postives = 161/268 (60.07%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++P   A  AL GV MEL D AFPLL G+V T DA  A    +IA++VG  PR  GMERKD++ +N  I+ AQ +AL + A+ + KVLVV NPANTNA I  + AP +  +N T + RLDHNRAL Q+S KL   V  ++ +++WGNHS + YPD   AT   A+    + + + D  W N N+   PT       II+A     +A      I  +  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELPVDKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDADIALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVASRDVKVLVVGNPANTNAYIAMKSAPDLKPENFTAMLRLDHNRALSQLSAKLGKPVGGMEKLVVWGNHSPTMYPDYRFATADGAS----IADAINDQEW-NANT-FIPTVGKRGAAIIEARGSSSAASAANAAIDHVRDWVLGSNGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDHB_DICDI (Probable malate dehydrogenase 2, mitochondrial OS=Dictyostelium discoideum GN=mdhB PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.570e-55
Identity = 120/267 (44.94%), Postives = 157/267 (58.80%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHA-APNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV +TGA+GQIGY L+  IA G MLG DQP+IL  L++P A  +L GV MEL D AFPLLKG+V +    EA  G + A++VG  PR +GMER D++  N  I+  Q  AL++ A     +VLVV NPANTNALI    AP+I  K  + +TRLDHNR L Q+++K    V+D++   IWGNHS++QYPD+N  TV      K + + + D  W+  N    PT       II A  L  +A      I  +  WT    G W
Sbjct:   22 KAPVRVAITGASGQIGYQLLFRIASGDMLGKDQPIILQCLELPGAMNSLKGVSMELDDCAFPLLKGIVQSDKPEEAFAGADYALLVGARPRSKGMERGDLLKANAEIFSVQGKALDKSANRDTLRVLVVGNPANTNALIAARNAPNIDPKRFSAMTRLDHNRGLAQLADKTGSAVTDIEKFCIWGNHSATQYPDINFGTVK----GKSLVDTINDQKWVKDN--FIPTVQQRGAAIIAARGLSSAASAASAAIDHMRDWTYGTNGQW 282          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_XANCP (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris GN=mdh PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.663e-55
Identity = 125/268 (46.64%), Postives = 159/268 (59.33%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++    A  AL GV MEL D AFPLL G+V T DA  A   +++A++VG  PR  GMERKD++ +N  I+ AQ +AL + A  + KVLVV NPANTNA I  + AP +  KN T + RLDHNRAL Q+S KL   V  ++ +++WGNHS + YPD   AT   A+    + + + D  W  G     PT       II+A  L  +A      I  +  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNAGT--FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSNGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_XANC8 (Malate dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=mdh PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.663e-55
Identity = 125/268 (46.64%), Postives = 159/268 (59.33%), Query Frame = 1
Query:   79 KEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIP--PAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            K PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++    A  AL GV MEL D AFPLL G+V T DA  A   +++A++VG  PR  GMERKD++ +N  I+ AQ +AL + A  + KVLVV NPANTNA I  + AP +  KN T + RLDHNRAL Q+S KL   V  ++ +++WGNHS + YPD   AT   A+    + + + D  W  G     PT       II+A  L  +A      I  +  W L   G W
Sbjct:    2 KAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELEDCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNKVAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGIEKLVVWGNHSPTMYPDYRFATSDGAS----IGDAINDQEWNAGT--FIPTVGKRGAAIIEARGLSSAASAANAAIDHVRDWVLGSNGKW 263          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.663e-55
Identity = 126/270 (46.67%), Postives = 161/270 (59.63%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPP--AAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            M+K+PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L+IP   A +AL GV MEL D AFPLL G+ A  D + A    + A++VG  PR  GMER +++S N +I+ AQ  AL   A+ N KVLVV NPANTNA I  + AP +P KN T + RLDHNRA  QI+ K    VS +K + +WGNHS + Y D   AT+  A+    V++++ D  W        PT       II+A  L  +A      I  +  W L   G+W
Sbjct:    1 MSKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEIPDEKAQKALKGVMMELEDCAFPLLAGMEAHGDPMTAFKDADYALLVGSRPRGPGMERAELLSINGAIFTAQGKALNAVASRNVKVLVVGNPANTNAYIAMKAAPDLPRKNFTAMLRLDHNRAASQIAAKTGKPVSSIKQLAVWGNHSPTMYADYRFATIDGAS----VKDMINDQVW--NKDVFLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGTNGAW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_VEREI (Malate dehydrogenase OS=Verminephrobacter eiseniae (strain EF01-2) GN=mdh PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.954e-55
Identity = 126/270 (46.67%), Postives = 162/270 (60.00%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAA--EALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWLNGNS*HXPTT---WC*IIKAESLQGSAVLLCCDIFRIGSWTLRHLGSW 867
            M K+PVRV VTGAAGQIGYAL+  IA G MLG DQPVIL +L++P     +ALNGV MEL D AFPLL G+ A +D + A    + A++VG  PR  GMER ++++ N +I+ AQ  AL   A+   KVLVV NPANTNA I  + AP +P KN T + RLDHNRA+ QI+ K    V+D++ + +WGNHS + Y D   AT    AG + V  ++ D AW N N    PT       II+A  L  +A      I  +  W L   G W
Sbjct:    1 MNKKPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLEVPAEGPQKALNGVMMELDDCAFPLLAGMTAHSDPMAAFKDADYALLVGSRPRGPGMERAELLAVNGAIFIAQGKALNAVASRQVKVLVVGNPANTNAFIAMQSAPDLPRKNFTAMLRLDHNRAVSQIAAKTGQAVADIEKLTVWGNHSPTMYADYRFAT----AGGQSVAAMINDQAW-NANV-FLPTVGKRGAAIIEARGLSSAASAANAAIDHMRDWALGSNGRW 264          
BLAST of EY756378 vs. ExPASy Swiss-Prot
Match: MDH_MYCUA (Malate dehydrogenase OS=Mycobacterium ulcerans (strain Agy99) GN=mdh PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.954e-55
Identity = 111/220 (50.45%), Postives = 148/220 (67.27%), Query Frame = 1
Query:   73 MAKEPVRVLVTGAAGQIGYALVPMIARGVMLGTDQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAAPNCKVLVVANPANTNALILKEFAPSIPAKNITCLTRLDHNRALGQISEKLNVQVSDVKNVIIWGNHSSSQYPDVNHATVHTAAGEKPVRELVKDDAWL 732
            M+  P++V VTGAAGQIGY+L+  +A G +LG D+P+ L +L+I PA +AL GV MEL D AFPLL GV   +DA +   G N+A++VG  PR  GMER D++  N +I+ AQ  AL + AA + +V V  NPANTNALI    AP IP +  + LTRLDHNRA+ Q++ K  V V+D+K + IWGNHS++QYPD+ HA V      K   E+V D AW+
Sbjct:    1 MSASPLKVAVTGAAGQIGYSLLFRLASGSLLGPDRPIELRLLEIEPALKALEGVVMELDDCAFPLLSGVEIGSDANKIFDGANLALLVGARPRGPGMERSDLLEANGAIFTAQGKALNEVAADDIRVGVTGNPANTNALIAMTNAPDIPRERFSALTRLDHNRAISQLAAKTGVAVTDIKKMTIWGNHSATQYPDLFHAEVK----GKNAAEVVNDQAWI 216          
The following BLAST results are available for this feature:
BLAST of EY756378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
MDH_XANCB1.603e-5547.01Malate dehydrogenase OS=Xanthomonas campestris pv.... [more]
MDH_BURXL1.603e-5546.27Malate dehydrogenase OS=Burkholderia xenovorans (s... [more]
MDH_STRMK2.093e-5547.01Malate dehydrogenase OS=Stenotrophomonas maltophil... [more]
MDH_STRM52.093e-5547.01Malate dehydrogenase OS=Stenotrophomonas maltophil... [more]
MDHB_DICDI3.570e-5544.94Probable malate dehydrogenase 2, mitochondrial OS=... [more]
MDH_XANCP4.663e-5546.64Malate dehydrogenase OS=Xanthomonas campestris pv.... [more]
MDH_XANC84.663e-5546.64Malate dehydrogenase OS=Xanthomonas campestris pv.... [more]
MDH_METPP4.663e-5546.67Malate dehydrogenase OS=Methylibium petroleiphilum... [more]
MDH_VEREI7.954e-5546.67Malate dehydrogenase OS=Verminephrobacter eiseniae... [more]
MDH_MYCUA7.954e-5550.45Malate dehydrogenase OS=Mycobacterium ulcerans (st... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756378 ID=EY756378; Name=EY756378; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCTTCTCTCGCTTTACTGGAAAAATCTTTTCGTTTCCTGT
GATACATCTCTGATCCGAACTAATGGCCAAGGAACCAGTTCGCGTTCTCG
TCACCGGCGCCGCAGGGCAAATTGGATATGCACTTGTCCCCATGATTGCT
AGGGGAGTGATGTTGGGTACTGACCAGCCTGTGATTCTGCACATGCTTGA
TATCCCACCTGCAGCAGAGGCATTGAATGGTGTGAAGATGGAGTTGGTTG
ATGCTGCATTCCCTCTTCTTAAAGGTGTTGTTGCTACAACTGATGCTGTT
GAGGCATGCACTGGGGTCAATATTGCCGTTATGGTTGGTGGCTTTCCAAG
AAAAGAAGGAATGGAGAGAAAAGATGTGATGTCAAAGAACGTTTCAATCT
ACAAGGCTCAGGCTTCTGCCCTGGAGCAGCACGCAGCTCCGAACTGCAAG
GTTCTAGTTGTCGCTAACCCTGCAAACACCAATGCATTGATTCTGAAAGA
ATTTGCGCCATCAATCCCTGCTAAGAACATTACATGCTTGACCAGATTGG
ATCATAACAGGGCATTGGGACAAATATCTGAGAAACTGAATGTCCAAGTA
TCTGATGTTAAGAATGTGATTATTTGGGGAAATCATTCATCATCTCAGTA
CCCTGATGTCAACCATGCAACTGTNCATACTGCAGCTGGGGAAAAGCCTG
TCCGTGAGCTTGTCAAGGATGATGCATGGTTGAATGGAAATTCATAACAC
GNCCCAACAACGTGGTGCTGAATCATCAAAGCAGAAAGTCTCCAGGGCTC
TGCTGTGCTACTCTGCTGTGACATATTCCGGATTGGTTCTTGGACTCTGA
GGCACTTGGGCTCATGG
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