EY756373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 36/81 (44.44%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 20 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPS 262 R +VG L+W +D +LE F + G + ++K++ DRE+GRSRGFGFVT+ + + +AI+ +NG +L GR I V+ A++R S Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSRGS 87
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_RANCA (Cold-inducible RNA-binding protein OS=Rana catesbeiana GN=cirbp PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.659e-13 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 20 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 +++VG LS+ D+ LET+F + G++ E VV DRE+ RSRGFGFVT+ + E+ +A+ +NG + GR IRV A Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGMNGKTVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.355e-12 Identity = 33/80 (41.25%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 11 GGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAE 250 G R+YVGN+ +++ L T+ E G + A+V+YD+ SGRSR FGFVT + E+ + I+ LN ++ GR I+V++ E Sbjct: 82 GARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITE 161 HSP 2 Score: 67.3958 bits (163), Expect = 2.556e-11 Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 20 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 +VY+GNL+ V + L+ F E+GKVL AKV + +S GFGFV++SS EEV+ AI +LN L G+ IRV+ A Sbjct: 185 KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_RAT (Cold-inducible RNA-binding protein OS=Rattus norvegicus GN=Cirbp PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12 Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 AS +++VG LS+ ++ ALE +F + G++ E VV DRE+ RSRGFGFVT+ + ++ +A+ ++NG + GR IRV A Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_MOUSE (Cold-inducible RNA-binding protein OS=Mus musculus GN=Cirbp PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12 Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 AS +++VG LS+ ++ ALE +F + G++ E VV DRE+ RSRGFGFVT+ + ++ +A+ ++NG + GR IRV A Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_CRIGR (Cold-inducible RNA-binding protein OS=Cricetulus griseus GN=CIRBP PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.770e-12 Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 AS +++VG LS+ ++ ALE +F + G++ E VV DRE+ RSRGFGFVT+ + ++ +A+ ++NG + GR IRV A Sbjct: 2 ASDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBM3_MOUSE (Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.020e-12 Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA--EARPSR 265 +S +++VG L++ D+ ALE F G + E VV DRE+ RSRGFGF+T+++ E +A+ ++NG L GR IRV A AR SR Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHAGKSARGSR 90
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_PONAB (Cold-inducible RNA-binding protein OS=Pongo abelii GN=CIRBP PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 AS +++VG LS+ ++ +LE +F + G++ E VV DRE+ RSRGFGFVT+ + ++ +A+ ++NG + GR IRV A Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_HUMAN (Cold-inducible RNA-binding protein OS=Homo sapiens GN=CIRBP PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.944e-12 Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 AS +++VG LS+ ++ +LE +F + G++ E VV DRE+ RSRGFGFVT+ + ++ +A+ ++NG + GR IRV A Sbjct: 2 ASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.727e-12 Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 2 Query: 62 ALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPSR 265 +L + F G+VLE+K++ DRE+ RSRGFGFVT+S+ E + +AI+ +NG +L GR I V+ A++R R Sbjct: 2 SLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQSRGGR 69 The following BLAST results are available for this feature:
BLAST of EY756373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756373 ID=EY756373; Name=EY756373; organism=Citrus sinensis; type=EST; length=418bpback to top |