EY756373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBPB_ANASP (Putative RNA-binding protein rbpB OS=Anabaena sp. (strain PCC 7120) GN=rbpB PE=3 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 8.786e-12 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 23 VYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPSR 265 +YVGNLS+ V + +L +F E G V ++ DRE+GR RGFGFV S E AI++L+G + GR ++V+ A+ R R Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEALDGAEWMGRDLKVNKAKPREDR 83
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.147e-11 Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 23 VYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR 256 ++VG+L+ VDD L F++ L V++D ++G SRG+GFV+++S ++ NA+DS+ G DL GR +R++ A R Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKR 241
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CIRBP_XENTR (Cold-inducible RNA-binding protein OS=Xenopus tropicalis GN=cirbp PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.147e-11 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 20 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 +++VG L++ + +LE +F + G+V E VV DRES RSRGFGFVT+ + E+ +A+ ++NG + GR IRV A Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVDQA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBPA_SYNY3 (Putative RNA-binding protein rbpA OS=Synechocystis sp. (strain PCC 6803) GN=rbpA PE=3 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11 Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 23 VYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPSR 265 +YVGNLS+ V + L +F E G V ++ DRE+GR RGFGFV + E AI++L+G + GR ++V+ A+ R +R Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEALDGAEWMGRDLKVNKAKPRENR 83
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBM3_RAT (Putative RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11 Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 +S +++VG L++ D+ ALE F G + E VV DRE+ RSRGFGF+T+++ E + + ++NG L GR IRV A Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11 Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVA 247 +S +++VG L++ D+ ALE F G + E VV DRE+ RSRGFGF+T+++ E A+ ++NG L GR IRV A Sbjct: 2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBM39_PONAB (RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 29/78 (37.18%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRV 238 ++G R+YVG+L + + + L +F G++ +++ D E+GRS+G+GF+T+S +E A++ LNG +LAGR ++V Sbjct: 246 SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBM39_MOUSE (RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 29/78 (37.18%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRV 238 ++G R+YVG+L + + + L +F G++ +++ D E+GRS+G+GF+T+S +E A++ LNG +LAGR ++V Sbjct: 246 SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: RBM39_HUMAN (RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 29/78 (37.18%), Postives = 53/78 (67.95%), Query Frame = 2 Query: 5 ASGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRV 238 ++G R+YVG+L + + + L +F G++ +++ D E+GRS+G+GF+T+S +E A++ LNG +LAGR ++V Sbjct: 246 SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
BLAST of EY756373 vs. ExPASy Swiss-Prot
Match: CSTFT_MOUSE (Cleavage stimulation factor 64 kDa subunit, tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.360e-11 Identity = 30/83 (36.14%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 23 VYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPSRRQ 271 V+VGN+ + + L+ +F E G V+ ++VYDRE+G+ +G+GF Y E +A+ +LNG + +GRA+RV A + ++ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100 The following BLAST results are available for this feature:
BLAST of EY756373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756373 ID=EY756373; Name=EY756373; organism=Citrus sinensis; type=EST; length=418bpback to top |