EY756361

Overview
NameEY756361
Unique NameEY756361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756361 vs. ExPASy Swiss-Prot
Match: ERYA2_SACER (Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.264e-13
Identity = 55/160 (34.38%), Postives = 78/160 (48.75%), Query Frame = 3
Query:  168 EPIPQLNS---STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVWGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHXALVHRAQLSSGQXXXXXXXXXXXXXDACQIGKGCGATIICRARGAE 638
            EP P +     +  VRV V+AT +N+ + L  LG Y +K  +    G++ +G V AVGP+V  F  GD V G    G+FA   V D   L  VP G     AAA+P+A+ T+H AL   A L +GQ              A  + +  GA ++  A  A+
Sbjct: 2839 EPAPDVEQPLRAGEVRVDVRATGVNFRDVLLALGMYPQKADM----GTEAAGVVTAVGPDVDAFAPGDRVLGLFQ-GAFAPIAVTDHRLLARVPDGWSDADAAAVPIAYTTAHYALHDLAGLRAGQSVLIHAAAGGVGMAAVALARRAGAEVLATAGPAK 2993          
BLAST of EY756361 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.803e-13
Identity = 46/157 (29.30%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  171 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVWGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHXALVHRAQLSSGQXXXXXXXXXXXXXDACQIGKGCGATIICRARGAE 638
            PIP+ +    V ++V+A  +N  +     G +  KP LP+ PG D +G ++AVG +VS FK GD V+    + G +A++ +A    ++ +P+  D    AA+ + + T++ AL+H A +  G+              ACQI +  G  ++  A   E
Sbjct:   31 PIPKDHQ---VLIKVQACGVNPVDTYIRSGTHNIKPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTEE 184          
BLAST of EY756361 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.398e-12
Identity = 43/150 (28.67%), Postives = 76/150 (50.67%), Query Frame = 3
Query:  171 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVWGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHXALVHRAQLSSGQXXXXXXXXXXXXXDACQIGKGCGATII 617
            PIP+ +    V ++V A  +N        G Y   P LP+ PG+D +G V+++G +VS FK GD V+  + + G +A++ +A    ++ +P+  D    AA+ + + T+  AL H A+  +G+              ACQI +  G  ++
Sbjct:   31 PIPKDHQ---VLIKVHACGINPVETYIRSGTYTRIPLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVL 177          
BLAST of EY756361 vs. ExPASy Swiss-Prot
Match: VAT1_DANRE (Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = 3
Query:  192 STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVWGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHXALVHRAQLSSGQ 536
            S  V VRVK   LN+A+ +   G Y   P  P  PG + SG ++AVG  V++ KVGD V      G + + +V   +  F +P+G     AAALPV + T++  L     L   Q
Sbjct:   98 SGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVLVLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQ 212          
BLAST of EY756361 vs. ExPASy Swiss-Prot
Match: VAT1L_MOUSE (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Mus musculus GN=Vat1l PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 38/124 (30.65%), Postives = 61/124 (49.19%), Query Frame = 3
Query:  162 KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVWGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHXALVHRAQLSSG 533
            K  P PQ      +++RVKA  LN+ + +   G     P  P VPG + SG V+A+G +V  +++GD V  F    ++A+ +      ++ +P       AAA P+ F T++  L   A L  G
Sbjct:   59 KAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYTMLFEIANLREG 179          
BLAST of EY756361 vs. ExPASy Swiss-Prot
Match: VAT1L_HUMAN (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Homo sapiens GN=VAT1L PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 38/124 (30.65%), Postives = 61/124 (49.19%), Query Frame = 3
Query:  162 KTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVWGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHXALVHRAQLSSG 533
            K  P PQ      +++RVKA  LN+ + +   G     P  P VPG + SG V+A+G +V  +++GD V  F    ++A+ +      ++ +P       AAA P+ F T++  L   A L  G
Sbjct:   61 KAMPEPQ---DGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREG 181          
The following BLAST results are available for this feature:
BLAST of EY756361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ERYA2_SACER1.264e-1334.38Erythronolide synthase, modules 3 and 4 OS=Sacchar... [more]
QOR_BOVIN4.803e-1329.30Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
QOR_CAVPO1.398e-1228.67Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
VAT1_DANRE3.442e-1135.65Synaptic vesicle membrane protein VAT-1 homolog OS... [more]
VAT1L_MOUSE4.496e-1130.65Synaptic vesicle membrane protein VAT-1 homolog-li... [more]
VAT1L_HUMAN4.496e-1130.65Synaptic vesicle membrane protein VAT-1 homolog-li... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756361 ID=EY756361; Name=EY756361; organism=Citrus sinensis; type=EST; length=922bp
CACGCGTCCGGAGCTTTTTTGATGATAACGCCTTACATTTTCATAATAAA
TTGGAAACTTTGAAGTGCTCAACTCGAACGAAGATGGAGGCTCTGGTGTG
CAGGAAACTGGGCGATCCAACGGTCTCAATTCACGATGAAAAATCGCCGA
TTGTGTTGAGTAAAACTGAGCCAATTCCACAATTGAATTCTTCAACTGCA
GTTAGAGTCAGAGTGAAAGCCACCAGCTTGAACTACGCTAATTACTTGCA
GATATTGGGGAAATATCAAGAGAAACCACCATTGCCCTTCGTCCCCGGCT
CCGATTATTCGGGCACTGTTGATGCGGTGGGCCCCAATGTCTCAAATTTC
AAAGTGGGTGACACTGTTTGGGGATTTGCTGCCCTTGGCTCCTTTGCCCA
ATTCATCGTCGCTGATCAGTCAGAATTGTTTCCAGTGCCAAAGGGATGTG
ATTTGTTGGCTGCTGCTGCACTTCCTGTTGCATTTGGAACCTCACATGNT
GCTCTTGTTCATCGGGCACAATTGTCCTCCGGTCAGGTCTTGCTTGTTCT
TGGTGCTGCTGGAGGTGTTGGTGTTGACGCTTGTCAAATTGGCAAGGGTT
GCGGAGCCACTATCATTTGCCGTGCTAGGGGTGCTGAAAGATAAAATTTT
TGAAGTCATTGGGCGTCGATCATGTAGTTGACTTGAGCATGAGAGGGCCT
TCCGAGTGTCAAGAAGTCCTCAAGCAAAGAAACTCAAAGGGGTTGATGTC
TTTATGTCCTGGTGGAGGCAACTTACTAAGGAATCCTGAACTTTTTGACT
GGGGGGTCAATTCTTAGCATTGGCTTTGCAAAGGGGAAATCCCACAATCC
CGCGTATATTGCTTTTGTAAGAACGGACGCACACGACTTTCTGGGGAACT
TAAAATCCTCCCCCCTGTGGGT
back to top