EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_NITSB (50S ribosomal protein L6 OS=Nitratiruptor sp. (strain SB155-2) GN=rplF PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.103e-33 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R LT+N + G++KGFEKKL++ GVGYRAA++G+ L L LGFSHP+ IP+GI+++VE+N IT+ G+DK +GQ AA IR +RPPEPYKGKGVKYVDEVI RK GK+ ++ Sbjct: 69 RALTNNAIEGLTKGFEKKLEINGVGYRAAVKGKELELQLGFSHPILYPIPEGIQISVEKNI-ITIKGHDKQKVGQVAAEIRSFRPPEPYKGKGVKYVDEVIIRKAGKTAKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_MYCGE (50S ribosomal protein L6 OS=Mycoplasma genitalium GN=rplF PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.458e-33 Identity = 68/108 (62.96%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 95 LTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSRE 418 L +N V+GV+KGFEKKL +VGVGYRA +EGQ L L LG+SHP++ IP+ + V VE+NT IT+SG K +GQFA IRKWR PEPYKGKGV Y +EVI RK GK+ E Sbjct: 74 LVNNAVIGVTKGFEKKLILVGVGYRANVEGQFLNLQLGYSHPIKELIPNQLTVKVEKNTEITISGIKKELVGQFATEIRKWRKPEPYKGKGVLYFNEVIVRKQGKTAE 181
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEAE (50S ribosomal protein L6 OS=Pseudomonas aeruginosa GN=rplF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMVVGVS+GFE+KLQ+VGVGY+A +GQVL LSLGFSHPV +P GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVVGVSQGFERKLQLVGVGYKAQAKGQVLSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEAB (50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rplF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMVVGVS+GFE+KLQ+VGVGY+A +GQVL LSLGFSHPV +P GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVVGVSQGFERKLQLVGVGYKAQAKGQVLSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEA8 (50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain LESB58) GN=rplF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMVVGVS+GFE+KLQ+VGVGY+A +GQVL LSLGFSHPV +P GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVVGVSQGFERKLQLVGVGYKAQAKGQVLSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEA7 (50S ribosomal protein L6 OS=Pseudomonas aeruginosa (strain PA7) GN=rplF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMVVGVS+GFE+KLQ+VGVGY+A +GQVL LSLGFSHPV +P GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVVGVSQGFERKLQLVGVGYKAQAKGQVLSLSLGFSHPVDYELPAGIVAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_MARMS (50S ribosomal protein L6 OS=Marinomonas sp. (strain MWYL1) GN=rplF PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33 Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMVVGVS+GFEK+L + GVGYRAAL+G VL LSLGFSHPV +P+G+ T I + G DK A+GQ AA +R +RPPEPYKGKGV+Y DEVIRRK K + Sbjct: 68 TRALVNNMVVGVSQGFEKRLFLQGVGYRAALKGNVLNLSLGFSHPVDYELPEGVTAECASQTEIVIRGIDKQAVGQVAAEVRGFRPPEPYKGKGVRYSDEVIRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEA6 (50S ribosomal protein L6 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rplF PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.192e-33 Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 2 Query: 56 MASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 +A+ A + R+L D MV+GVS+GFEKKLQ+ GVGYRAA +G+ L L+LGFSHPV +P+GI V T I V G DK +GQ AA+IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 58 VANGWAQAGTARSLLDAMVIGVSQGFEKKLQLNGVGYRAAAQGKKLNLTLGFSHPVAYEMPEGISVETPSQTEIVVKGADKQLVGQVAANIRGYRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_GEOBB (50S ribosomal protein L6 OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=rplF PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.192e-33 Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL +NMV+GVSKGFE L++ GVGYRA ++G VL L+LGFSHPV +P GI V VE+ T++ V G DK +G+ AA IR +RPPEPYKGKGVKY DE I RK GK+ Sbjct: 68 TRTLINNMVIGVSKGFETLLEINGVGYRAEVKGNVLNLALGFSHPVNFELPTGITVEVEKMTKLKVMGIDKEVVGETAAKIRAFRPPEPYKGKGVKYADETILRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CARHZ (50S ribosomal protein L6 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplF PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.192e-33 Identity = 65/109 (59.63%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL +NM+VGV+ G++K L++VGVGYRAA +G+ LVL++G+SHPV M P+GI++ V +I V G DK +G FAA+IR R PEPYKGKG+KY DEVIRRK GK+ Sbjct: 68 TRTLINNMIVGVTNGYQKSLELVGVGYRAAKQGRKLVLTVGYSHPVEMDPPEGIEIEVPAQNQIIVKGIDKELVGNFAATIRAVREPEPYKGKGIKYTDEVIRRKAGKT 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |