EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CAMJR (50S ribosomal protein L6 OS=Campylobacter jejuni (strain RM1221) GN=rplF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R L N+VVG+++GF K L++ GVGY+AAL+G+VL LSLGFSHP+ IP+GI++ V++NT I V G DK +GQ AA IR++RPPEPYKGKGVKY DE I RK GK+ ++ Sbjct: 69 RALAYNIVVGLTQGFSKTLEINGVGYKAALKGKVLELSLGFSHPINYDIPEGIEIVVDKNT-IAVKGSDKQVVGQVAAQIREFRPPEPYKGKGVKYSDERIIRKAGKTSKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CAMJJ (50S ribosomal protein L6 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rplF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R L N+VVG+++GF K L++ GVGY+AAL+G+VL LSLGFSHP+ IP+GI++ V++NT I V G DK +GQ AA IR++RPPEPYKGKGVKY DE I RK GK+ ++ Sbjct: 69 RALAYNIVVGLTQGFSKTLEINGVGYKAALKGKVLELSLGFSHPINYDIPEGIEIVVDKNT-IAVKGSDKQVVGQVAAQIREFRPPEPYKGKGVKYSDERIIRKAGKTSKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CAMJE (50S ribosomal protein L6 OS=Campylobacter jejuni GN=rplF PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R L N+VVG+++GF K L++ GVGY+AAL+G+VL LSLGFSHP+ IP+GI++ V++NT I V G DK +GQ AA IR++RPPEPYKGKGVKY DE I RK GK+ ++ Sbjct: 69 RALAYNIVVGLTQGFSKTLEINGVGYKAALKGKVLELSLGFSHPINYDIPEGIEIVVDKNT-IAVKGSDKQVVGQVAAQIREFRPPEPYKGKGVKYSDERIIRKAGKTSKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CAMJ8 (50S ribosomal protein L6 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rplF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 66/111 (59.46%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R L N+VVG+++GF K L++ GVGY+AAL+G+VL LSLGFSHP+ IP+GI++ V++NT I V G DK +GQ AA IR++RPPEPYKGKGVKY DE I RK GK+ ++ Sbjct: 69 RALAYNIVVGLTQGFSKTLEINGVGYKAALKGKVLELSLGFSHPINYDIPEGIEIVVDKNT-IAVKGSDKQVVGQVAAQIREFRPPEPYKGKGVKYSDERIIRKAGKTSKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_SHEHH (50S ribosomal protein L6 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rplF PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.742e-31 Identity = 66/121 (54.55%), Postives = 83/121 (68.60%), Query Frame = 2 Query: 53 EMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 E A + A + R L +NMVVGV++GF KKL +VGVGYRA L G+ + L+LGFSHP+ +PDG+ T I +SG DK IGQ AA IR +RPPEPYKGKGV+Y DE +RRK K + Sbjct: 56 ESAKTAAQAGTARALINNMVVGVTEGFVKKLTLVGVGYRAKLAGKDIDLTLGFSHPLVHKLPDGVTAECPSQTEIVLSGTDKQLIGQVAAEIRGYRPPEPYKGKGVRYADEQVRRKEAKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEHT (50S ribosomal protein L6 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rplF PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.742e-31 Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 R L +NM+VG +G+EKKLQ+VGVGYRAA +G+ L L+LGFSHPV +P+GI + T + V G DK +GQ AA+IR +R PEPYKGKGV+Y DE +RRK K + Sbjct: 69 RALINNMIVGTHEGYEKKLQLVGVGYRAAAKGKTLDLTLGFSHPVHFAVPEGITIETPSQTEVLVKGVDKQLVGQTAANIRAYRKPEPYKGKGVRYSDENVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_MYCGA (50S ribosomal protein L6 OS=Mycoplasma gallisepticum GN=rplF PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 8.742e-31 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 95 LTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSRE 418 L N + GV+ GF+K+L++VGVGYRA+L+ VL L LG+SHP+ + IP +KV V++NT ITVSG DK +G+FA IRKWR PEPYKGKGV Y++E I RK GK+ E Sbjct: 73 LIKNALEGVTVGFKKELRLVGVGYRASLKDNVLNLQLGYSHPINLDIPKDLKVTVDKNTEITVSGIDKQKVGEFAIQIRKWRMPEPYKGKGVLYLNEQIIRKAGKTAE 180
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BEII9 (50S ribosomal protein L6 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplF PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 8.742e-31 Identity = 65/127 (51.18%), Postives = 90/127 (70.87%), Query Frame = 2 Query: 35 AQSRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 A S SE + A+ TR++ +N+V+GVS+GFE+KL++ GVGY+AA++G+ L LSLG+SH + IPDGI + + T ++++G DK +GQ AA IR RPPEPYKGKGVKY E I RK GK + Sbjct: 51 AVSPRSEDKKARAAWGMTRSIVNNLVIGVSQGFERKLEITGVGYKAAVQGKNLQLSLGYSHDISFPIPDGIAIAAPKPTEVSITGIDKQRVGQIAAEIRALRPPEPYKGKGVKYAGEFIFRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_XANC5 (50S ribosomal protein L6 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rplF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.142e-30 Identity = 66/116 (56.90%), Postives = 83/116 (71.55%), Query Frame = 2 Query: 62 SSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGK 409 S IA + R + NMV GVS+GFE+KL++VGVGYRAA++G+ L L+LGFSHP+ P+GI ++ T I V G DK +G+ AA IR +RPPEPYKGKGVKY DEVI RK K Sbjct: 58 SQIALTGTVRAILANMVKGVSEGFERKLELVGVGYRAAMQGKDLSLALGFSHPLVFVAPEGITLSTPTQTEIVVQGADKQRVGEVAAKIRGFRPPEPYKGKGVKYADEVIIRKEAK 173
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_THIDA (50S ribosomal protein L6 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rplF PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.142e-30 Identity = 64/109 (58.72%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 R L +NMV GVSKGFE+KL +VGVGYRA +G L LSLGFSHPV +P GIKV T I + G D+ A+GQ AA +R +RPPEPYKGKGV+Y DEV+ +K K + Sbjct: 68 RALVNNMVQGVSKGFERKLTLVGVGYRAQAQGDALNLSLGFSHPVVHKMPAGIKVETPTQTEIVIKGIDRQAVGQVAADVRAYRPPEPYKGKGVRYSDEVVIKKETKKK 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |