EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_THICR (50S ribosomal protein L6 OS=Thiomicrospira crunogena (strain XCL-2) GN=rplF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.593e-32 Identity = 67/122 (54.92%), Postives = 87/122 (71.31%), Query Frame = 2 Query: 50 SEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 +E ++ A + R++ +NMV+GV++GFEKKLQ+VGVGYRA +G+VL L+LGFSHPV +P+G+ V T I V G DK +GQ AA IR +RPPEPYKGKGVKY DE I RK K + Sbjct: 56 NESKNAWAQAGTARSIINNMVLGVTEGFEKKLQLVGVGYRAQAQGKVLNLTLGFSHPVNHELPEGVTVETPSQTEIVVKGADKQVVGQVAAEIRGYRPPEPYKGKGVKYADEYILRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_OCEIH (50S ribosomal protein L6 OS=Oceanobacillus iheyensis GN=rplF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.593e-32 Identity = 63/109 (57.80%), Postives = 84/109 (77.06%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR+L +NMV+GVSKGFEK L+++GVGYRA +G V++ G+SHPV + DGI++ V +NT+ITV G DK +G AA+IR RPPEPYKGKG++Y DE +RRK GK+ Sbjct: 68 TRSLINNMVIGVSKGFEKSLEIIGVGYRAQKQGDKTVINAGYSHPVELEAIDGIEIEVPKNTQITVKGIDKELVGAIAANIRAIRPPEPYKGKGIRYTDEYVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CYAP7 (50S ribosomal protein L6 OS=Cyanothece sp. (strain PCC 7424) GN=rplF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.593e-32 Identity = 66/108 (61.11%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 RTL NMV GVSKGFEK+L++ GVGYRAA +G L L++G+S PV M +P GI V VE+NT IT++G DK +G AA IR RPPEPYKGKG++Y EV+RRK GK+ Sbjct: 69 RTLVSNMVEGVSKGFEKRLEIQGVGYRAAAQGSKLTLNVGYSKPVEMDMPSGIGVAVEKNTEITITGIDKEIVGNVAAKIRAVRPPEPYKGKGIRYKGEVVRRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOTE (50S ribosomal protein L6 OS=Clostridium tetani GN=rplF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.593e-32 Identity = 63/109 (57.80%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR+L +NMVVGV++G+EKKL++VGVGYRA L+G+ LVL+LGFSHPV + +G++ ++ +ITV G DK +G A+ IR WR PEPYKGKG+KY +E IRRK GK+ Sbjct: 69 TRSLVNNMVVGVTEGYEKKLELVGVGYRAQLQGKKLVLNLGFSHPVEIEAKEGVEFQLDGTNKITVKGIDKELVGAVASDIRSWRKPEPYKGKGIKYENEAIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOBM (50S ribosomal protein L6 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplF PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.593e-32 Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GV++G+ K L+++GVGYRA L+G+ LVLSLGFSHPV M G++ VE T++ V G DK +G AA IRKWR PEPYKGKG+KY +EVIRRK GK+ Sbjct: 69 TRALINNMVTGVNEGYVKTLELIGVGYRAQLQGKKLVLSLGFSHPVEMEAVSGVEFEVEGGTKVKVKGIDKELVGAVAADIRKWRKPEPYKGKGIKYENEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOB6 (50S ribosomal protein L6 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=rplF PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.081e-32 Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GV++G+ K L+++GVGYRA L+G+ LVLSLGFSHPV M G++ VE T++ V G DK +G AA IRKWR PEPYKGKG+KY +EVIRRK GK+ Sbjct: 69 TRALINNMVTGVNEGYIKTLELIGVGYRAQLQGKKLVLSLGFSHPVEMEAVSGVEFEVEGGTKVKVKGIDKELVGAVAADIRKWRKPEPYKGKGIKYENEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_SYNJB (50S ribosomal protein L6 OS=Synechococcus sp. GN=rplF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.718e-32 Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 RTL NMV GVSKGFE++L++VGVGYRAA++G LVL++G+SHPV + P GI++ VE N I VSG DK +G AA IR RPPEPYKGKG++Y+ E +RRK GKS Sbjct: 69 RTLVANMVDGVSKGFERRLELVGVGYRAAIQGSKLVLNVGYSHPVEIPFPPGIQIAVEGNNIIVVSGTDKELVGNTAARIRAVRPPEPYKGKGIRYLGEQVRRKAGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PROM5 (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.718e-32 Identity = 68/108 (62.96%), Postives = 80/108 (74.07%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 RTL NMV GV+ G+ KKL++VGVG RA ++G+ LV+S G+SHPV MT PDGI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I RK GKS Sbjct: 69 RTLISNMVQGVTDGYSKKLEIVGVGSRAQVKGKTLVVSAGYSHPVEMTPPDGITYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYQDERIIRKAGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_GEOSF (50S ribosomal protein L6 OS=Geobacter sp. (strain FRC-32) GN=rplF PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.718e-32 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL +NMV GV+KGFE L++ GVGYRA L+G VL LSLG+SHP+ ++P GI V V++ T+I V G DK +GQ AA IR +R PEPYKGKGVKY DE I RK GK+ Sbjct: 68 TRTLINNMVTGVTKGFETALEINGVGYRAELKGDVLNLSLGYSHPINFSLPKGINVEVDKMTKILVKGVDKELVGQTAAKIRDFRGPEPYKGKGVKYADETILRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_LACPL (50S ribosomal protein L6 OS=Lactobacillus plantarum GN=rplF PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.635e-32 Identity = 64/109 (58.72%), Postives = 81/109 (74.31%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR +NMV GV+KGF K LQ+VGVGYRA L+G+ LVLS+G+SHPV P+ + V V +NT I +SG K A+G FAA +R R PEPYKGKG++YVDE +RRK GK+ Sbjct: 68 TRANVNNMVEGVTKGFTKNLQLVGVGYRAQLQGKKLVLSVGYSHPVEFATPENLTVEVPDNTHINISGIGKQAVGDFAAEVRAVRSPEPYKGKGIRYVDEYVRRKEGKT 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |