EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ALCBS (50S ribosomal protein L6 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplF PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.635e-32 Identity = 63/110 (57.27%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV GV+ GFE+KLQ++GVGYRA +G+VL L+LGFSHPV +P+GI V T I + G DK +GQ AA++R +RPPEPYKGKGV+Y DE +RRK K + Sbjct: 68 TRALLNNMVTGVADGFERKLQLLGVGYRAQAQGKVLNLTLGFSHPVAYQLPEGITVETPSQTEIVIKGIDKQLVGQVAANVRAFRPPEPYKGKGVRYADEQVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEFS (50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain SBW25) GN=rplF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32 Identity = 65/110 (59.09%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV GVS+GFE+KLQ+VGVGY+A +G VL L+LGFSHPV +P+GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVDYELPEGITAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEF5 (50S ribosomal protein L6 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rplF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32 Identity = 65/110 (59.09%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV GVS+GFE+KLQ+VGVGY+A +G VL L+LGFSHPV +P+GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVDYELPEGITAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_DICTD (50S ribosomal protein L6 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV+GV++GFEK+L++ G GYRA ++G LVL +GFSHPV + IP G+ V+V++NT+I+V G DK +GQFAA +R RP EPYKGKG++Y E IR+K GK+ Sbjct: 69 TRALINNMVLGVTQGFEKRLELQGTGYRARVQGNKLVLEVGFSHPVELEIPTGLTVSVQDNTKISVKGIDKELVGQFAAIVRSVRPAEPYKGKGIRYEGEKIRQKAGKA 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_DESHY (50S ribosomal protein L6 OS=Desulfitobacterium hafniense (strain Y51) GN=rplF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32 Identity = 70/117 (59.83%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 68 IASSFH--TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 ++ S H TRTL NMV GV+KGF K L MVGVGYRAA +G LVLS+G SHPV + +GI+V V +I V G DK +G FAA IRK RPPEPYKGKG+KY +EV+RRK GK+ Sbjct: 60 LSRSLHGLTRTLVANMVEGVTKGFSKSLDMVGVGYRAAKQGNKLVLSVGKSHPVELIPFEGIEVEVPAQNKIIVKGMDKELVGDFAAEIRKERPPEPYKGKGIKYENEVVRRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_DESHD (50S ribosomal protein L6 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32 Identity = 70/117 (59.83%), Postives = 84/117 (71.79%), Query Frame = 2 Query: 68 IASSFH--TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 ++ S H TRTL NMV GV+KGF K L MVGVGYRAA +G LVLS+G SHPV + +GI+V V +I V G DK +G FAA IRK RPPEPYKGKG+KY +EV+RRK GK+ Sbjct: 60 LSRSLHGLTRTLVANMVEGVTKGFSKSLDMVGVGYRAAKQGNKLVLSVGKSHPVELIPFEGIEVEVPAQNKIIVKGMDKELVGDFAAEIRKERPPEPYKGKGIKYENEVVRRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLONN (50S ribosomal protein L6 OS=Clostridium novyi (strain NT) GN=rplF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.054e-32 Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 +R SE A TR L +NMVVGV++G+EK L++VGVGYRA L+G+ L L+LG+SHPV + G++ V E T++ VSG DK +G AA+IR WR PEPYKGKG+KY EVIRRK GK+ Sbjct: 54 TRPSENVQHKALHGLTRALINNMVVGVTQGYEKTLELVGVGYRAQLKGKDLTLNLGYSHPVEIKAVKGVEYKVPEPTKVVVSGIDKELVGSVAANIRVWRKPEPYKGKGIKYAGEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_THISH (50S ribosomal protein L6 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = 2 Query: 59 ASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 AS A + R L +NMVVGVS+GFE+KL++VGVGYRA +G+ L L+LGFSHPV +P+GI + T I V G DK +GQ AA IR +RPPEPYKGKGVKY +E I RK K + Sbjct: 59 ASKYAMAGTMRALVNNMVVGVSQGFERKLELVGVGYRAQAQGKTLNLTLGFSHPVAYPVPEGITIETPSQTEILVKGVDKQVVGQVAAEIRAFRPPEPYKGKGVKYANEQIIRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_LACSS (50S ribosomal protein L6 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 61/108 (56.48%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 R +NM++GV++GF+K L ++GVGYRA L+G+ LVL++G+SHPV M P+G+ V V NT I +SG K +GQFAA IR RPPEPYKGKG++Y DE +RRK GK+ Sbjct: 68 RANLNNMILGVTEGFKKTLDLIGVGYRAQLKGKTLVLNVGYSHPVEMEAPEGVNVEVPSNTNIIISGISKQKVGQFAAEIRDVRPPEPYKGKGIRYTDEHVRRKEGKT 175
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_GEOMG (50S ribosomal protein L6 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 +R + S ++ TRTL +NMVVGV+KGFEK L++ GVGYRA +G VL LSLG+SHP+ +P GI V V++ T++ V G DK +GQ AA IR +R PEPYKGKG+KY DE I RK GK+ Sbjct: 53 NRADDAIKSRSAHGLTRTLINNMVVGVTKGFEKILEINGVGYRAEAKGDVLSLSLGYSHPINFPLPKGITVEVDKMTKVFVRGIDKELVGQTAAKIRSFRGPEPYKGKGIKYADERILRKAGKT 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |