EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_DESAH (50S ribosomal protein L6 OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=rplF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 R+L NM+ GVS G+EKKL + G+GYRA + G +VL++G+S+PV +P GI VE+NT +++SG DK +G+ AA IR+ RPPEPYKGKG+ Y DE I +K GK+ Sbjct: 70 RSLVANMITGVSVGYEKKLLLNGIGYRAEVNGNTVVLNVGYSNPVNFELPKGISALVEKNTTLSLSGIDKEIVGETAARIRRIRPPEPYKGKGIMYSDERIIKKAGKA 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURCJ (50S ribosomal protein L6 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=rplF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 S + E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 52 SPVDESREANALSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYADEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURCH (50S ribosomal protein L6 OS=Burkholderia cenocepacia (strain HI2424) GN=rplF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 S + E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 52 SPVDESREANALSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYADEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURCC (50S ribosomal protein L6 OS=Burkholderia cenocepacia (strain MC0-3) GN=rplF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 S + E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 52 SPVDESREANALSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYADEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURCA (50S ribosomal protein L6 OS=Burkholderia cenocepacia (strain AU 1054) GN=rplF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 S + E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 52 SPVDESREANALSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYADEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_TREDE (50S ribosomal protein L6 OS=Treponema denticola GN=rplF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 58/108 (53.70%), Postives = 84/108 (77.78%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 R+L +NMV GVS GF K L + GVGYRA ++G++LV++LG+S+ + IP+GI+V V++ ++ +SG K A+GQFA+ +RK R PEPYKGKG++Y DE+I+RK GKS Sbjct: 70 RSLLNNMVTGVSTGFTKTLVINGVGYRAEVQGKLLVMALGYSNDFSVIIPEGIEVKVDQ-LKVIISGASKEAVGQFASQVRKLRGPEPYKGKGIRYEDEIIKRKVGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_SILST (50S ribosomal protein L6 OS=Silicibacter sp. (strain TM1040) GN=rplF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 56/110 (50.91%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 +RT+ NMV GV++GF+K+L++ GVGYRA ++G L L+LG+SH V T P+G+ + + T I V G D A+G+ AA IR WR PEPYKGKG++Y E I RK GK + Sbjct: 68 SRTMVANMVQGVTQGFKKELEIQGVGYRAQMQGNTLKLNLGYSHDVDFTAPEGVTITAPKQTEIVVEGADAQAVGEVAAKIRDWRRPEPYKGKGIRYKGEFIFRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_FRAP2 (50S ribosomal protein L6 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 59/118 (50.00%), Postives = 80/118 (67.80%), Query Frame = 2 Query: 62 SSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 ++IA S R + +NMV GVSKGFE+KL+++GVGYRA +G L L+LGFSHPV +P GI T I + G DK +G+ A+ IR++R PEPYKGKGV+Y DE + +K K + Sbjct: 61 NAIAQSGTARAILNNMVEGVSKGFERKLKIIGVGYRAKAQGSELNLTLGFSHPVVYKLPQGITAETPAPTEIILKGADKEVLGKVASEIREYRKPEPYKGKGVRYEDEYVAKKEAKKK 178
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURCM (50S ribosomal protein L6 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=rplF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 S + E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 52 SPVDESREANALSGTMRAIIANAVQGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYSDEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ACIAD (50S ribosomal protein L6 OS=Acinetobacter sp. (strain ADP1) GN=rplF PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 55/109 (50.46%), Postives = 79/109 (72.48%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 R + +N+V GVS+GFE+KLQ++GVGY+AA++G + L+LGFSHP+ ++P+G+ T I + DK +GQ A+ IR +RPPEPYKGKGV+Y DEV+ RK K + Sbjct: 69 RAVLNNLVKGVSEGFERKLQLIGVGYKAAVKGTSINLNLGFSHPIDYSLPEGVTAETPTATEIILKSADKQLLGQVASEIRGYRPPEPYKGKGVRYSDEVVLRKEAKKK 177 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |