EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ROSDO (50S ribosomal protein L6 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rplF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27 Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 +RT+ N+V GVS+GF+K+L++ GVGYRAA+ G L L+LG SH V T P G+ V + T I V G D+ +GQ AA+IR+WR PEPYKGKG++Y E + RK GK + Sbjct: 68 SRTMVANLVTGVSEGFKKELEIQGVGYRAAMTGNTLKLNLGLSHDVDYTPPAGVTVTAPKQTEIVVEGIDEQLVGQVAANIRQWRKPEPYKGKGIRYKGEFVFRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_RALME (50S ribosomal protein L6 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rplF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27 Identity = 59/109 (54.13%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 R L NMV GV+ GFE+KLQ+VGVGYRA L+G L L LGFSH V +P+G+K T I + G DK +GQ AA +R +RPPEPYKGKGV+Y DE + K K + Sbjct: 69 RALAANMVKGVTTGFERKLQLVGVGYRAQLQGAALKLQLGFSHDVIHEMPEGVKAETPTQTEIIIKGADKQKVGQVAAEVRAYRPPEPYKGKGVRYADERVILKETKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURVG (50S ribosomal protein L6 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=rplF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27 Identity = 61/123 (49.59%), Postives = 80/123 (65.04%), Query Frame = 2 Query: 47 LSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 ++E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 54 VNESREANAMSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYSDEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_BURA4 (50S ribosomal protein L6 OS=Burkholderia ambifaria (strain MC40-6) GN=rplF PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27 Identity = 62/125 (49.60%), Postives = 80/125 (64.00%), Query Frame = 2 Query: 41 SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 S + E + A S R + N V GV+KGFE+KL +VGVGYRA +G L LSLGFSHPV +P+G+K T I + G +K +GQ AA +R +RPPEPYKGKGV+Y DEV+ K K + Sbjct: 52 SPVDESREANALSGTMRAIIANAVHGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYSDEVVILKETKKK 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_SYMTH (50S ribosomal protein L6 OS=Symbiobacterium thermophilum GN=rplF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 61/109 (55.96%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL NMV GV+KG+ K L++VG GYRAA G L LS+G+SHPV P GI+ V ++ V+G DK +GQ AA IR RPPEPY GKG+KY E IRRK GK+ Sbjct: 68 TRTLIANMVEGVTKGYSKTLELVGTGYRAAKTGNQLTLSVGYSHPVVFNPPPGIEFQVPAPNQVIVAGIDKQLVGQVAADIRATRPPEPYLGKGIKYAGEHIRRKVGKA 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_STAAW (50S ribosomal protein L6 OS=Staphylococcus aureus (strain MW2) GN=rplF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GVS+G+ K L++VGVGYRA ++G+ L+L++G+SHPV + + I +VE+NT + V G K +G A++IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKDLILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_STAAT (50S ribosomal protein L6 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rplF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GVS+G+ K L++VGVGYRA ++G+ L+L++G+SHPV + + I +VE+NT + V G K +G A++IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKDLILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_STAAS (50S ribosomal protein L6 OS=Staphylococcus aureus (strain MSSA476) GN=rplF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GVS+G+ K L++VGVGYRA ++G+ L+L++G+SHPV + + I +VE+NT + V G K +G A++IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKDLILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_STAAR (50S ribosomal protein L6 OS=Staphylococcus aureus (strain MRSA252) GN=rplF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GVS+G+ K L++VGVGYRA ++G+ L+L++G+SHPV + + I +VE+NT + V G K +G A++IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKDLILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_STAAN (50S ribosomal protein L6 OS=Staphylococcus aureus (strain N315) GN=rplF PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27 Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV GVS+G+ K L++VGVGYRA ++G+ L+L++G+SHPV + + I +VE+NT + V G K +G A++IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRALLNNMVQGVSQGYVKVLELVGVGYRAQMQGKDLILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGKGIRYQGEYVRRKEGKT 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |