EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_DESAD (50S ribosomal protein L6 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 61/108 (56.48%), Postives = 84/108 (77.78%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 R+L N + GVSKGF K L++VGVGY+ ++G+ +VL++GFSHPV +P GI+ + E NT++T+SG DK +G+ AA +R+ RPPEPYKGKG+KY+DE IRRK GKS Sbjct: 69 RSLLANCIEGVSKGFSKTLEVVGVGYKVNVQGKNIVLNVGFSHPVNYELPAGIEASAEGNTKLTISGVDKQLVGEVAAQLRRVRPPEPYKGKGIKYIDEQIRRKAGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CYAA5 (50S ribosomal protein L6 OS=Cyanothece sp. (strain ATCC 51142) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 RTL NM+ GVS+GFEK+L + GVGYRA +G L L++G+S PV MT+P GI V VE NT++ VSG DK +G AA IR RPPEPYKGKG++Y DE +RRK GK+ Sbjct: 69 RTLVANMIQGVSQGFEKRLNIQGVGYRAQAQGSKLTLNVGYSKPVEMTMPQGINVAVENNTQVVVSGIDKEIVGNIAAKIRGVRPPEPYKGKGIRYQDEYVRRKAGKA 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOPS (50S ribosomal protein L6 OS=Clostridium perfringens (strain SM101 / Type A) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 32 DAQ---SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 DAQ +R S++ A TR L +NMVVGVS+GF K L++ GVGYRA L+G+ LV++LG+SHPV + DG+ ++ T++ V G DK +G AA+IR WR PEPYKGKG+KY DEVIRRK GK+ Sbjct: 48 DAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOPE (50S ribosomal protein L6 OS=Clostridium perfringens GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 32 DAQ---SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 DAQ +R S++ A TR L +NMVVGVS+GF K L++ GVGYRA L+G+ LV++LG+SHPV + DG+ ++ T++ V G DK +G AA+IR WR PEPYKGKG+KY DEVIRRK GK+ Sbjct: 48 DAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CLOP1 (50S ribosomal protein L6 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 2 Query: 32 DAQ---SRLSEMASSIASSFHTRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 DAQ +R S++ A TR L +NMVVGVS+GF K L++ GVGYRA L+G+ LV++LG+SHPV + DG+ ++ T++ V G DK +G AA+IR WR PEPYKGKG+KY DEVIRRK GK+ Sbjct: 48 DAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYKGKGIKYSDEVIRRKEGKT 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ACAM1 (50S ribosomal protein L6 OS=Acaryochloris marina (strain MBIC 11017) GN=rplF PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 68/119 (57.14%), Postives = 89/119 (74.79%), Query Frame = 2 Query: 62 SSIASSFH--TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 S IA H +RTL NMV GVSKGFEKKLQ+ GVGYRA ++G+ L+L++G+S+PV + P+G++V VE NT + VSG +K +G AA IR RPPEPYKGKG++Y DE +RRK GK+ Sbjct: 58 SRIARQRHGLSRTLIANMVEGVSKGFEKKLQIQGVGYRAQVQGRNLILNVGYSNPVTIEPPEGVQVAVESNTNVIVSGINKEVVGNTAARIRAVRPPEPYKGKGIRYADEYVRRKVGKA 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEU5 (50S ribosomal protein L6 OS=Pseudomonas stutzeri (strain A1501) GN=rplF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 64/110 (58.18%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV+GVS+GFE+KLQ+VGVGY+A +GQVL L+LGFSHPV +P G+ T I + G DK +GQ AA IR +R PEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVIGVSQGFERKLQLVGVGYKAQAKGQVLSLALGFSHPVDYELPQGVTAETPSQTDILIKGVDKQLVGQVAAEIRDFRRPEPYKGKGVRYSDEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_DICT6 (50S ribosomal protein L6 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 61/109 (55.96%), Postives = 84/109 (77.06%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR L +NMV+GV++GFEK+L++ G GYRA ++G L+L +GFSHPV + IP G+ V V++NT+I+V G DK +GQFAA +R RP EPYKGKG++Y E IR+K GK+ Sbjct: 69 TRALINNMVLGVTQGFEKRLELQGTGYRARVQGNKLILEVGFSHPVELEIPTGLTVTVQDNTKISVKGIDKELVGQFAAIVRSVRPAEPYKGKGIRYEGEKIRQKAGKA 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ANAVT (50S ribosomal protein L6 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.033e-31 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 +RTL NMV GVS+GF+++L++ GVGYRA ++G+ L+L++G+SH V++ PDGI+ VE NT + VSGYDK +G AA IR RPPEPYKGKG++Y EV+RRK GK+ Sbjct: 68 SRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLILNMGYSHQVQIEPPDGIQFAVENNTNVIVSGYDKEIVGNTAAKIRAVRPPEPYKGKGIRYAGEVVRRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_WOLSU (50S ribosomal protein L6 OS=Wolinella succinogenes GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 65/111 (58.56%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R L +N+V+G+S GF K+L++ GVGY+AA++G VL L+LGFSHPV IP+G+++ VE+N IT+ G DK IGQ AA IR++RPPEPYKGKGVKY DE I RK GK+ ++ Sbjct: 69 RALANNIVIGLSAGFTKQLEINGVGYKAAVKGSVLELALGFSHPVNYEIPEGVEIAVEKNV-ITIKGSDKQQIGQIAAEIREFRPPEPYKGKGVKYSDETIIRKAGKTSKK 178 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |