EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_SYNWW (50S ribosomal protein L6 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 +R L NMV GVS GFEKKL++VGVGYRA ++G+ LV+S+GFSHPV + P+GI+ V TRITV G DK +G AA IR R PEPYKGKG+KY +EVIRRK GK+ Sbjct: 68 SRALIANMVQGVSAGFEKKLELVGVGYRAQMQGKKLVISIGFSHPVEVEPPEGIEFEVPAVTRITVKGIDKQLVGNTAAHIRAIRKPEPYKGKGIKYENEVIRRKAGKA 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_SYNJA (50S ribosomal protein L6 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 64/108 (59.26%), Postives = 82/108 (75.93%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 RTL NMV GVS+GFE++L++VGVGYRA+ +G L+L++G+SHPV + P GI++ VE N I VSG DK +G AA IR RPPEPYKGKG++YV E +RRK GKS Sbjct: 69 RTLVANMVDGVSRGFERRLELVGVGYRASTQGNKLILNVGYSHPVEIPFPPGIQIAVEGNNVIVVSGIDKELVGNTAARIRAVRPPEPYKGKGIRYVGEQVRRKAGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEMY (50S ribosomal protein L6 OS=Pseudomonas mendocina (strain ymp) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 63/110 (57.27%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV+GVS+GFE+KLQ+VGVGY+A +GQVL L+LGFSHP+ +P G+ T I + G DK +GQ AA IR +R PEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVIGVSQGFERKLQLVGVGYKAQAKGQVLNLALGFSHPIDYELPAGVVAETPNQTEILIKGIDKQLVGQVAAEIRDFRRPEPYKGKGVRYADEVVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_NITWN (50S ribosomal protein L6 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 68/138 (49.28%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 32 DAQSRLSEMASSIASSFHT----------RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 D + +L + A +A + T R N+V GV+KGFEKKL+++GVGYRAAL+G+ L L+LG+SH V +P+GI + V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY DE I RK GK + Sbjct: 40 DVEVKLEDGAVKVAPRYETKRAQALYGTARAQVANLVAGVTKGFEKKLEIIGVGYRAALQGKSLQLALGYSHDVNYAVPEGITIAVPKPTEITITGNDAQRVGQVAAEIRGYRPPEPYKGKGVKYADETIFRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_NITHX (50S ribosomal protein L6 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 70/138 (50.72%), Postives = 90/138 (65.22%), Query Frame = 2 Query: 32 DAQSRLSEMASSIASSFHT----------RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 D + +L A +A + T R N+V GV+KGFEKKL++VGVGYRAAL+G+ L L+LG+SH V IP+GI + V + T IT++G D +GQ AA IR +RPPEPYKGKGVKY DE I RK GK + Sbjct: 40 DVEVKLENGAVKVAPRYETNRAQALYGTARAQVANLVAGVTKGFEKKLEIVGVGYRAALQGKTLQLALGYSHDVSYAIPEGITIAVPKPTEITIAGNDAQRVGQVAAEIRGYRPPEPYKGKGVKYADEFIFRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_LISW6 (50S ribosomal protein L6 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 60/109 (55.05%), Postives = 84/109 (77.06%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+++ V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVEIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_LISIN (50S ribosomal protein L6 OS=Listeria innocua GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 60/109 (55.05%), Postives = 84/109 (77.06%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR + +NMVVGVS+G+EKKL+++GVGYRA +G LVL++G+SHPV P G+++ V NT++ V GY+K +G+ AA+IR RPPEPYKGKG++Y E +RRK GK+ Sbjct: 68 TRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDKLVLNVGYSHPVEFVAPKGVEIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGKGIRYEGEHVRRKEGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_GEOSL (50S ribosomal protein L6 OS=Geobacter sulfurreducens GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL +NMVVGV+KGFE+ L++ GVGYRA +G VL LSLG+SHP+ +P GI V V++ T++ V G DK +GQ AA IR +R PEPYKGKG+KY DE I RK GK+ Sbjct: 68 TRTLVNNMVVGVTKGFERALEINGVGYRAEAKGDVLNLSLGYSHPINYALPAGIIVEVDKMTKLVVKGIDKELVGQTAAKIRSFRGPEPYKGKGIKYADEKILRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ANASP (50S ribosomal protein L6 OS=Anabaena sp. (strain PCC 7120) GN=rplF PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.349e-31 Identity = 62/109 (56.88%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 +RTL NMV GVS+GF+++L++ GVGYRA ++G+ LVL++G+SH V++ PDGI+ VE NT + VSGYDK +G AA +R RPPEPYKGKG++Y EV+RRK GK+ Sbjct: 68 SRTLVANMVEGVSQGFQRRLEIQGVGYRAQVQGRNLVLNMGYSHQVQIEPPDGIQFVVENNTNVIVSGYDKEIVGNTAAKVRAVRPPEPYKGKGIRYAGEVVRRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PSEPW (50S ribosomal protein L6 OS=Pseudomonas putida (strain W619) GN=rplF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.761e-31 Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV GVS+GFE+KLQ+VGVGY+A +G VL L+LGFSHPV +P GI T I + G DK +GQ AA IR +RPPEPYKGKGV+Y DEV+RRK K + Sbjct: 68 TRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVDYELPAGITAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK 177 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |