EY756359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_METSB (50S ribosomal protein L6 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR++ +N+VVGVSKGFE+KL++ GVGY+AA+ G+ L LSLGFSH V IPDGI + + T + +SG DK +GQ A+ IR RPPEPYKGKGVKY E I RK GK + Sbjct: 68 TRSMVNNLVVGVSKGFERKLEITGVGYKAAVSGKNLQLSLGFSHDVTFPIPDGISIVAAKPTEVAISGIDKRQVGQIASEIRALRPPEPYKGKGVKYAGEFIFRKEGKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_METI4 (50S ribosomal protein L6 OS=Methylacidiphilum infernorum (isolate V4) GN=rplF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 61/111 (54.95%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 R+L +N V+GV +GF+KKL++ G+G+RAA+EG+ LV++LGFSHPV IP+GI V V++NT++T+ G DK +G AA IR + PEPYKGKG++Y EVIRRK GK+ ++ Sbjct: 69 RSLLNNAVMGVHEGFQKKLEINGIGFRAAVEGKKLVMNLGFSHPVVYEIPEGISVKVQDNTKLTIEGIDKCLVGAVAADIRGFYVPEPYKGKGIRYAGEVIRRKAGKTAQK 179
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_MARAV (50S ribosomal protein L6 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rplF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSR 415 TR L +NMV GVS G+E+KLQ+ GVGYRA +G+ L L+LGFSHPV +P+G+ NT + + G DK +GQ AA IR +RPPEPYKGKGV+Y DE +RRK K + Sbjct: 68 TRALVNNMVTGVSTGWERKLQLTGVGYRAQAQGKKLNLTLGFSHPVEYELPEGVTAETPSNTEVVIRGIDKQQVGQVAAEIRAFRPPEPYKGKGVRYADEQVRRKEAKKK 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CYAP8 (50S ribosomal protein L6 OS=Cyanothece sp. (strain PCC 8801) GN=rplF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TRTL NMV GVSKGFEK+L + GVGYRA ++G L L++G+S PV MT+P GI+V VE NT + VSG DK +G +A IR RPPE YKGKG++Y DE +RRK GK+ Sbjct: 68 TRTLVANMVEGVSKGFEKRLSIQGVGYRAQVQGTKLTLNVGYSKPVEMTMPAGIQVAVENNTLVIVSGIDKEIVGNVSAEIRAVRPPEVYKGKGIRYSDEFVRRKAGKT 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CHLTR (50S ribosomal protein L6 OS=Chlamydia trachomatis GN=rplF PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 60/106 (56.60%), Postives = 84/106 (79.25%), Query Frame = 2 Query: 95 LTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 L NMV GV GFEK+L+M+GVG+RAA++G +L LS+G SHP +M IP G++V+VE+NT I++ G +K +G+FAA +R RPPEPYKGKG++Y +E +RRK GK+ Sbjct: 72 LIANMVKGVHTGFEKRLEMIGVGFRAAVQGSLLDLSIGVSHPTKMPIPTGLEVSVEKNTLISIKGINKQLVGEFAACVRAKRPPEPYKGKGIRYENEYVRRKAGKA 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CHLTB (50S ribosomal protein L6 OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=rplF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 60/106 (56.60%), Postives = 84/106 (79.25%), Query Frame = 2 Query: 95 LTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 L NMV GV GFEK+L+M+GVG+RAA++G +L LS+G SHP +M IP G++V+VE+NT I++ G +K +G+FAA +R RPPEPYKGKG++Y +E +RRK GK+ Sbjct: 72 LIANMVKGVHTGFEKRLEMIGVGFRAAVQGSLLDLSIGVSHPTKMPIPTGLEVSVEKNTLISIKGINKQLVGEFAACVRAKRPPEPYKGKGIRYENEYVRRKAGKA 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_CHLT2 (50S ribosomal protein L6 OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=rplF PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 60/106 (56.60%), Postives = 84/106 (79.25%), Query Frame = 2 Query: 95 LTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 L NMV GV GFEK+L+M+GVG+RAA++G +L LS+G SHP +M IP G++V+VE+NT I++ G +K +G+FAA +R RPPEPYKGKG++Y +E +RRK GK+ Sbjct: 72 LIANMVKGVHTGFEKRLEMIGVGFRAAVQGSLLDLSIGVSHPTKMPIPTGLEVSVEKNTLISIKGINKQLVGEFAACVRAKRPPEPYKGKGIRYENEYVRRKAGKA 177
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_AYWBP (50S ribosomal protein L6 OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=rplF PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKSREE 421 TR L NMV GVSKGF+K L++VG+ YRA ++G+ L+LSLGFSHPV + IPD ++V V +NT I + G DK +G+FAA K R PEPYKGKG++YV + +R+K GKS ++ Sbjct: 69 TRALLSNMVEGVSKGFQKTLKIVGLAYRAQIKGKQLILSLGFSHPVSVAIPDNLEVVVNQNTEIVIKGIDKQLVGEFAAKNVKLRKPEPYKGKGIRYVGQYVRQKAGKSAKK 180
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_PROM9 (50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 67/108 (62.04%), Postives = 79/108 (73.15%), Query Frame = 2 Query: 89 RTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 R L NMV GV++GF KKL++VGVG RA ++G+ LV+S G+SHPV M PDGI VE NT +TVSG DK +G AA IR RPPEPYKGKG+KY DE I RK GKS Sbjct: 69 RALIANMVEGVTQGFSKKLEIVGVGSRAQVKGKNLVVSAGYSHPVEMIPPDGITYKVESNTNVTVSGIDKEIVGNEAAKIRSIRPPEPYKGKGIKYHDERILRKAGKS 176
BLAST of EY756359 vs. ExPASy Swiss-Prot
Match: RL6_ENTFA (50S ribosomal protein L6 OS=Enterococcus faecalis GN=rplF PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.125e-31 Identity = 60/109 (55.05%), Postives = 83/109 (76.15%), Query Frame = 2 Query: 86 TRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVEENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDEVIRRKGGKS 412 TR +NMVVGVS+GF+K L+++GVGYRA ++G L L++G+SHPV MT P+G+ V NT++ V G +K +G+ AA+IR RPPEPYKGKG++YV E +RRK GK+ Sbjct: 68 TRANFNNMVVGVSEGFQKALELIGVGYRAQVQGNKLTLNVGYSHPVEMTAPEGVTFEVPANTQVIVKGINKEVVGELAANIRGVRPPEPYKGKGIRYVGEFVRRKEGKT 176 The following BLAST results are available for this feature:
BLAST of EY756359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756359 ID=EY756359; Name=EY756359; organism=Citrus sinensis; type=EST; length=584bpback to top |