EY756239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_SCHPO (Mediator of RNA polymerase II transcription subunit 7 OS=Schizosaccharomyces pombe GN=med7 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13 Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 3 Query: 51 ELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKE 314 ELR L+R L L+ LEL ++ + P Q+ +VE+I ++ NLHHL+N RPHQ+R +LI +LE Q++ + VE ++ + L++ Sbjct: 227 ELRFLSRSLMLNFLELLGIMAKAPEQFPSKVENIRVLLLNLHHLINDYRPHQSRESLIMLLEKQLKHEESQVELLRTHNRQMTETLEK 314
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_DROME (Mediator of RNA polymerase II transcription subunit 7 OS=Drosophila melanogaster GN=MED7 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12 Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 33 NIDFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQR 302 + D +KEL+ LN L ++ L+L D L+ P R +++DISL+F N+HHLLN RPHQAR TL ++E+Q ++Q VE R ++ +R Sbjct: 73 HFDRRKELKKLNHSLLVNFLDLIDFLILNPDSPRRTEKIDDISLLFVNMHHLLNEFRPHQARETLRVMMEMQ---KRQRVETAARFQKHLER 161
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7B_XENLA (Mediator of RNA polymerase II transcription subunit 7-B OS=Xenopus laevis GN=med7-B PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.177e-12 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR L + ++ L++ D+L+ P R ++EDI L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLLMSILVNFLDMLDILIRSPGSIRREEKLEDIKLLFVHMHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVVEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_YEAST (Mediator of RNA polymerase II transcription subunit 7 OS=Saccharomyces cerevisiae GN=MED7 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 3 Query: 33 NIDFK-KELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 N +K +ELR L + L L+ LEL VL P Y R+VE+I I N+HHLLN RPHQ+R +LI +LE Q++ ++ + +I++ ++ +L TL Sbjct: 111 NYQYKIQELRKLLKSLLLNYLELIGVLSINPDMYERKVENIRTILVNIHHLLNEYRPHQSRESLIMLLEEQLEYKRGEIREIEQVCKQVHDKLTSIQDTL 210
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_ASHGO (Mediator of RNA polymerase II transcription subunit 7 OS=Ashbya gossypii GN=MED7 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.537e-12 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 27 GPNIDFK-KELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRL 308 G N +K KEL L + L L++LEL VL P ++ +VE I I N+HHLLN RPHQ+R +LI +LE Q++ +K+ + +I ++ Q +L Sbjct: 94 GNNYQYKIKELHKLLKSLLLNMLELVSVLSVNPERFPDKVEHIRTILFNIHHLLNEYRPHQSRESLIMLLEEQLEHKKEEIANIHAICDKVQAKL 188
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_XENTR (Mediator of RNA polymerase II transcription subunit 7 OS=Xenopus tropicalis GN=med7 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12 Identity = 35/99 (35.35%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR L + ++ L++ D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLLMSILVNFLDMLDILIRSPGSIRREEKLEDLKLLFVHMHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVVEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7A_XENLA (Mediator of RNA polymerase II transcription subunit 7-A OS=Xenopus laevis GN=med7-A PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-12 Identity = 35/99 (35.35%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 39 DFKKELRSLNRELQLHILELSDVLVERPSQYAR--RVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKESLGTL 329 D KKELR L + ++ L++ D+L+ P R ++ED+ L+F ++HHL+N RPHQAR TL ++E+Q ++R + E ++ E ++ L +L Sbjct: 73 DHKKELRKLLMSILVNFLDMLDILIRSPGSIRREEKLEDLKLLFVHMHHLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVVEMIQNCLASL 171
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_PICST (Mediator of RNA polymerase II transcription subunit 7 OS=Pichia stipitis GN=MED7 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 3 Query: 48 KELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRL 308 KEL L L L+ LEL + PSQY +++DISLI N++HLLN+ RPHQ+R +LI +L QI ++ ++ +++ E +++L Sbjct: 126 KELHKLMDSLLLNFLELIGLASIDPSQYESKIKDISLILININHLLNTYRPHQSRESLIMLLRKQIDAKRASINQVEKVCSEVKQKL 212
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_EMENI (Mediator of RNA polymerase II transcription subunit 7 OS=Emericella nidulans GN=med7 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.700e-11 Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 24 PGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKE 314 P ++ L +++ L L+ LE +L P Q+ +VEDI +F N HHLLN RPHQAR +LI ++E Q+ R K ++ + + +EE L + Sbjct: 118 PAQPLNHAYYLLKISKSLLLNFLEFVGILSVAPEQFEPKVEDIRNLFINAHHLLNLYRPHQARESLIMMMEAQLARTKDEIQQMDKLKEEVNAVLDQ 214
BLAST of EY756239 vs. ExPASy Swiss-Prot
Match: MED7_ASPOR (Mediator of RNA polymerase II transcription subunit 7 OS=Aspergillus oryzae GN=med7 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.787e-11 Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 24 PGPNIDFKKELRSLNRELQLHILELSDVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRRLKE 314 P ++ L +++ L L+ LE +L P Q+ +VED+ +F N HHLLN RPHQAR +LI ++E Q+ R ++ ++ + + +EE L++ Sbjct: 120 PSQPLNHAYYLLKISKSLLLNFLEFVGILSVAPEQFESKVEDLRNLFINAHHLLNLYRPHQARESLILMMEEQLSRTREEIQQMDKLKEEITGALEQ 216 The following BLAST results are available for this feature:
BLAST of EY756239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756239 ID=EY756239; Name=EY756239; organism=Citrus sinensis; type=EST; length=608bpback to top |