EY756236

Overview
NameEY756236
Unique NameEY756236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALPC (Glycine cleavage system H protein OS=Salmonella paratyphi C (strain RKS4594) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYTGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALPA (Glycine cleavage system H protein OS=Salmonella paratyphi A GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALNS (Glycine cleavage system H protein OS=Salmonella newport (strain SL254) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALHS (Glycine cleavage system H protein OS=Salmonella heidelberg (strain SL476) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALG2 (Glycine cleavage system H protein OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCSVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALEP (Glycine cleavage system H protein OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALDC (Glycine cleavage system H protein OS=Salmonella dublin (strain CT_02021853) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALCH (Glycine cleavage system H protein OS=Salmonella choleraesuis GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYTGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_SALA4 (Glycine cleavage system H protein OS=Salmonella agona (strain SL483) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
[Close]
BLAST of EY756236 vs. ExPASy Swiss-Prot
Match: GCSH_ESCF3 (Glycine cleavage system H protein OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gcvH PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.543e-21
Identity = 47/90 (52.22%), Postives = 62/90 (68.89%), Query Frame = 2 
Query:   23 LVFVELPETGASVKQGGGFGVVESVKATSDVNSPISGEVIEVNSKLTQTPGLVNSSPYEEGWLIKVKPSSPSDLESLMDPQAYTKFCEEE 292
            +VFV+LPE GA+V  G    V ESVKA SD+ +P+SGE++ VN  L+ +P LVNS PY  GW+ K+K S  S+LESL+D  AY    E+E
Sbjct:   40 MVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKASDESELESLLDATAYEALLEDE 129
The following BLAST results are available for this feature:
BLAST of EY756236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 435
Match NameE-valueIdentityDescription
GCSH_SALPC2.543e-2152.22Glycine cleavage system H protein OS=Salmonella pa... [more]
GCSH_SALPA2.543e-2152.22Glycine cleavage system H protein OS=Salmonella pa... [more]
GCSH_SALNS2.543e-2152.22Glycine cleavage system H protein OS=Salmonella ne... [more]
GCSH_SALHS2.543e-2152.22Glycine cleavage system H protein OS=Salmonella he... [more]
GCSH_SALG22.543e-2152.22Glycine cleavage system H protein OS=Salmonella ga... [more]
GCSH_SALEP2.543e-2152.22Glycine cleavage system H protein OS=Salmonella en... [more]
GCSH_SALDC2.543e-2152.22Glycine cleavage system H protein OS=Salmonella du... [more]
GCSH_SALCH2.543e-2152.22Glycine cleavage system H protein OS=Salmonella ch... [more]
GCSH_SALA42.543e-2152.22Glycine cleavage system H protein OS=Salmonella ag... [more]
GCSH_ESCF32.543e-2152.22Glycine cleavage system H protein OS=Escherichia f... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-B10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756236 ID=EY756236; Name=EY756236; organism=Citrus sinensis; type=EST; length=450bp
CCACGCGTCCGCATCTTGGAGACTAGTGTTTGTGGAGCTGCCAGAAACTG
GTGCCTCAGTCAAACAAGGCGGCGGCTTCGGGGTTGTAGAAAGTGTGAAA
GCAACCAGTGACGTTAATTCCCCCATTTCTGGTGAAGTTATTGAGGTTAA
CTCCAAGCTCACCCAAACGCCTGGCTTGGTCAATTCAAGCCCATATGAAG
AAGGATGGCTGATAAAGGTAAAGCCTAGCAGCCCTTCGGATTTAGAATCC
TTGATGGATCCACAGGCTTACACGAAATTTTGCGAAGAAGAAAATGCAGC
TCATTAGAATCTTCACACTGTTTCATTTTCTTTTCCCAAAACATATTAAT
AAATCTCTTTGTTTTACTCGCTATTTGTGTTGTAATTATGCATCTTCATG
TAATTAAGACCCATTTCTCCTTTCANNNNAAAAAAAAAAATAAAAAAAAA
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