EY756232

Overview
NameEY756232
Unique NameEY756232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756232 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.016e-13
Identity = 43/122 (35.25%), Postives = 64/122 (52.46%), Query Frame = 1
Query:   49 WAVCSNILDYELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLDSRPLP 414
            W  CS+ + +   D     +  +  LV AG+ V V+SGD D  IP+T +R  +    K+L L     +  W+   QVGGWT  Y  ++ F T+RGA H+ P  +P  +L L   FL ++ LP
Sbjct:  380 WTHCSDTVSF-WSDAPASMLPTLRTLVSAGLRVWVFSGDTDGRIPVTATRYSL----KKLGLKIVQDWTPWYTKLQVGGWTVEYDGLM-FVTVRGAGHQVPTFKPREALQLIHHFLGNKKLP 495          
BLAST of EY756232 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 1
Query:   40 VRGWAVCSNILDYELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFL 396
            +  W +C+N+LD+  +      I+    L   G    +YSGD D  +P TG+        + L  G    +R W    QV G+TQ Y + L+FATI+GA H  P  +P+ SL  +  +L
Sbjct:  393 IGSWLICTNVLDF--IHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTE----AWTRSLGYGVIDSWRPWHLNGQVSGYTQGYEHGLTFATIKGAGHTVPEYKPQESLAFYSRWL 505          
BLAST of EY756232 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 39/122 (31.97%), Postives = 55/122 (45.08%), Query Frame = 1
Query:   49 WAVCSNILDY-----ELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLD 399
            W +CS  L +      ++D           L  +G   ++YSGD D  +P TGS        K L       +R W    QV G+TQ Y N L+F TI+GA H  P  +P  +L  +  FL+
Sbjct:  383 WELCSGKLSFYHDAGSMIDFH-------RNLTLSGYRALIYSGDHDMCVPFTGSE----AWTKSLGYKVIDEWRAWISNDQVAGYTQGYANNLTFLTIKGAGHTVPEYKPREALDFYSRFLE 493          
BLAST of EY756232 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11
Identity = 38/119 (31.93%), Postives = 57/119 (47.90%), Query Frame = 1
Query:   40 VRGWAVCSNILDYELLDLEIPTITIVGKLVKAGIPVMVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFL 396
            +  W +CS+ L+Y      +  I     L  +G   +++SGD D  +P TGS      +  ++       +R W    QV G+TQ Y N L+F TI+GA H  P  +P  SL  +  FL
Sbjct:  377 IGNWELCSSNLEYRHDTGSM--IEYHRNLTLSGFRALIFSGDHDMCVPYTGSEAWTKAMGYKV----VDEWRPWMSNNQVAGFTQGYANNLTFLTIKGAGHTVPEYKPRESLDFYSRFL 489          
BLAST of EY756232 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.353e-11
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1
Query:  148 MVYSGDQDSVIPLTGSRKLVNGLAKELKLGTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKAFLDSRPL 411
            +VYS D D ++P  G+   +    K L    T  +R WF   QV G+T+ Y N ++FATI+G  H A + +PE S ++F+ ++  RPL
Sbjct:  382 LVYSSDHDMMVPYIGTEAWI----KSLNYSITDDWRPWFVNNQVIGYTRTYANNMTFATIKGGGHTAEY-KPEESFMMFQRWISGRPL 464          
The following BLAST results are available for this feature:
BLAST of EY756232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SCP34_ARATH6.016e-1335.25Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
CBP1_ORYSJ8.686e-1232.77Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP20_ARATH5.630e-1131.97Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
SCP21_ARATH7.353e-1131.93Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP18_ARATH7.353e-1137.50Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-B06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756232 ID=EY756232; Name=EY756232; organism=Citrus sinensis; type=EST; length=569bp
CCACGCGTCCGCGATGGCTCTCCCGCACGTCTTGTAGGAGTCCGCGGCTG
GGCGGTTTGCAGCAATATCCTAGATTATGAACTACTTGACCTGGAGATAC
CAACAATCACTATTGTCGGAAAACTTGTCAAGGCAGGAATCCCAGTGATG
GTGTACAGTGGAGATCAAGATTCTGTTATTCCATTGACTGGAAGTCGAAA
ATTAGTAAATGGGTTGGCAAAGGAATTGAAATTGGGAACCACCGTGCCTT
ACAGAGTGTGGTTTGAAGGGCAGCAGGTTGGTGGATGGACCCAAGTTTAT
GGTAATATCTTATCCTTTGCCACCATTAGAGGAGCATCTCATGAAGCCCC
ATTCTCTCAGCCTGAGAGATCACTTGTGCTGTTCAAGGCATTCTTGGACA
GTCGGCCTCTGCCGGAAGCATTCTGATTTTCTGTTCTGTTCTGTTATGTA
AAATGGAAGTTTGATTACAATTTTTTTGTTTGTTTGTTCATCCAGTTTGT
CCATTGTCCATGCTACGATGTGGCAAAAATTTGTAAAAAAATCAGGGAAA
GAAAAAAAAAAAAAAAAAA
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