EY756204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_SULTO (30S ribosomal protein S12P OS=Sulfolobus tokodaii GN=rps12p PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.317e-31 Identity = 69/131 (52.67%), Postives = 97/131 (74.05%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 466 +GM A RKL+ R RW + +K+ L + K P G+ A+G+VLEK+GIE++QPNSA+RK RVQL+KNG+ + AFVP DG +N+I+E+DEV+IAG G G ++GD+PGVR+KV+ V+GVSL AL+ Sbjct: 8 KGMFAARKLRLKRLKFRWHQRKFKRRMLKLKEKFDPLEGAPMARGVVLEKVGIESRQPNSAVRKAVRVQLVKNGRIVTAFVPGDGGVNFIDEHDEVVIAGIGGTLGRSMGDLPGVRYKVIMVNGVSLDALY 138
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METMJ (30S ribosomal protein S12P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps12p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.720e-31 Identity = 71/126 (56.35%), Postives = 86/126 (68.25%), Query Frame = 2 Query: 83 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 G A RKLK RW D Y + LG + K P G+ +GIVLEK+G+EAKQPNSAIRKC RVQLIKNG+++ AF DG +N+I+E+DEV I G GR G + GDIPGVRF V KV+ VSL Sbjct: 4 GKFAARKLKRDANNNRWHDTGYARRQLGLDVKADPLEGAPQGRGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFAVGDGAINFIDEHDEVEIEGIGGRLGRSKGDIPGVRFVVTKVNNVSL 129
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METBU (30S ribosomal protein S12P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps12p PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.720e-31 Identity = 68/126 (53.97%), Postives = 89/126 (70.63%), Query Frame = 2 Query: 83 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 G A +L+ R+ RW D Y + LG + K P +G+ +GIVLEK+G+EAKQPNSAIRKC R+QLIKNG++ AF P DG +N+I+E+DEV + GR G A+GDIPGVRFKV+ V+ VSL Sbjct: 4 GKYAAHRLQQVRKDARWKDTGYSRRTLGLDIKSDPLSGAPQGRGIVLEKVGVEAKQPNSAIRKCVRIQLIKNGRQATAFCPGDGAINFIDEHDEVTVERIGGRMGGAMGDIPGVRFKVIAVNNVSL 129
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METBF (30S ribosomal protein S12P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps12p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.934e-31 Identity = 69/127 (54.33%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 +G A LK R+ RW D SY + LG N P G+ +GIVLEK+G+EAKQPNSAIRKC R+QLIKNG+++ AF P DG +N+I+E+DEV + GR G A+GDIPGVRF+V V+ VSL Sbjct: 3 KGKYAANILKQTRKNARWKDTSYGRRVLGLNVKADPLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRIQLIKNGRQVTAFCPGDGAVNFIDEHDEVTVERIGGRMGGAMGDIPGVRFRVTAVNNVSL 129
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METAC (30S ribosomal protein S12P OS=Methanosarcina acetivorans GN=rps12p PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.934e-31 Identity = 70/127 (55.12%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 +G A LK R+ RW D Y + LG N P G+ +GIVLEK+G+EAKQPNSAIRKC RVQLIKNG+++ AF P DG +N+I+E+DEV + GR G A+GDIPGVRFKV+ V+ VSL Sbjct: 3 KGKYAANILKQTRKDARWKDTYYGRRVLGLNVKADPLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFCPGDGAVNFIDEHDEVTVEKIGGRMGGAMGDIPGVRFKVIAVNNVSL 129
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METMA (30S ribosomal protein S12P OS=Methanosarcina mazei GN=rps12p PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.832e-31 Identity = 69/127 (54.33%), Postives = 88/127 (69.29%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 +G A LK R+ RW D Y + LG N P G+ +GIVLEK+G+EAKQPNSAIRKC R+QLIKNG+++ AF P DG +N+I+E+DEV + GR G A+GDIPGVRFKV+ V+ VSL Sbjct: 3 KGKYAANILKQTRKDARWKDTYYGRRVLGLNVKADPLGGAPQGRGIVLEKVGVEAKQPNSAIRKCVRIQLIKNGRQVTAFCPGDGAVNFIDEHDEVTVERIGGRMGGAMGDIPGVRFKVIAVNNVSL 129
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_SULSO (30S ribosomal protein S12P OS=Sulfolobus solfataricus GN=rps12p PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 68/131 (51.91%), Postives = 96/131 (73.28%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 466 +G+ A RKL+ R R + + YK L + K P G+ A+GIVLEK+GIE++QPNSA+RKC RVQL++NG+ + AFVP DG +N+I+E+DEV+I G G G ++GD+PGVR+KV+ V+GVSL AL+ Sbjct: 8 KGIYAARKLRLKRLKFRRSQRKYKTKILKLKEKYDPLGGAPMARGIVLEKVGIESRQPNSAVRKCVRVQLVRNGRVVTAFVPGDGGVNFIDEHDEVIITGIGGTLGRSMGDLPGVRYKVIMVNGVSLDALY 138
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_AERPE (30S ribosomal protein S12P OS=Aeropyrum pernix GN=rps12p PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.115e-30 Identity = 68/130 (52.31%), Postives = 95/130 (73.08%), Query Frame = 2 Query: 83 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALF 466 G+ A RKL+ R RW+ + ++ L + K P G+ A+GIVLEK+G+EA+QPNSA+RKC RVQL+KN K + AFVP DG + Y++E+DEV+I G G +G ++GDIPGVR++VV V+GVSL AL+ Sbjct: 9 GLFAARKLRRKRLKFRWSQREFRIRMLDLKRKYDPLEGAPMARGIVLEKVGVEARQPNSALRKCVRVQLVKNKKVVTAFVPRDGGILYVDEHDEVIIEGIGGPRGRSMGDIPGVRYRVVMVNGVSLKALW 138
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METB6 (30S ribosomal protein S12P OS=Methanoregula boonei (strain 6A8) GN=rps12p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 68/127 (53.54%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 +G A RKL + RW+DK+Y + L + K P G+ A+GIVLEK+G+EAKQPNSAIRKC RVQLIKNG+++ AF DG +N+I+E+DEV I G GR G ++GDIPGVR+ V V+ V L Sbjct: 3 QGKFAARKLVRDSKKFRWSDKNYARRELNLDVKSDPLEGAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFAVGDGAINFIDEHDEVEIEGIGGRLGRSMGDIPGVRYVVTSVNNVCL 129
BLAST of EY756204 vs. ExPASy Swiss-Prot
Match: RS12_METHJ (30S ribosomal protein S12P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps12p PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.533e-30 Identity = 69/127 (54.33%), Postives = 89/127 (70.08%), Query Frame = 2 Query: 80 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSL 454 +G A RKLK RW+D + ++ G + K P G+ +GIVLEKIG+EAKQPNSAIRKC RVQLIKNG++++AF DG +N+I+E+DEV I G GR G ++GDIPGVRF V KV+ V L Sbjct: 3 QGKFAARKLKRDSARFRWSDPHFARTAGGLKLKSDPLEGAPQGRGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGRQVSAFAVGDGAINFIDEHDEVEIEGIGGRLGRSMGDIPGVRFVVTKVNNVCL 129 The following BLAST results are available for this feature:
BLAST of EY756204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756204 ID=EY756204; Name=EY756204; organism=Citrus sinensis; type=EST; length=765bpback to top |