EY756023

Overview
NameEY756023
Unique NameEY756023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 68/208 (32.69%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGS-LGDPV 592
            + +G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+  + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+F Q ++      E +   L DPV
Sbjct:   69 YLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVID---PLYPGGSFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 251          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 69/210 (32.86%), Postives = 103/210 (49.05%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVL------LQELA--LPEPIGS 577
            + +G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E +  WF+ G  I   G  +Y  +           ++  ++ LMG  E  R       G +G    +    Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+F Q +      L+ LA  L EP+ +
Sbjct:   48 YLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHSRWAMLGALGCVFPELLARNGVKFGEAS--WFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAG----GPLGE---VTDPIYPGGSFDPL----------ALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNN 232          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTLFV--------LEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLL 544
            + +G  PGDYG+D  GLS DPE    F + + L   EVI+GR+AMLGA+G I PE+L K   +  +  + WF+ G  I   G  +Y  +P  +           ++ LMG  E  R      PG               G G+  Y             D  +  + K+KE+KNGRLAM ++ G+F Q ++
Sbjct:   66 YLNGEFPGDYGWDTAGLSADPEA---FAKNRAL---EVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPV-WFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL--PGV--------------GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIV 233          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 67/208 (32.21%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGS-LGDPV 592
            + +G  P DYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+  + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G         Y GGS DP              +D ++  + K+KE+KNGRLAM ++ G+F Q ++      E +   L DPV
Sbjct:   70 YLTGEFPSDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELFARNGIKFGEAV--WFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGEVID---PLYPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 68/208 (32.69%), Postives = 101/208 (48.56%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGS-LGDPV 592
            + +G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G    +    Y GGS DP               D ++  + K+KE+K GRLAML++ G+F Q ++      E +   + DPV
Sbjct:   68 YLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----GPLGE---VVDPLYPGGSFDPL----------GLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPV 250          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGS-LGDPV 592
            + +G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G    +    Y GGS DP              +  ++  + K+KE+KNGRLAM ++ G+F Q ++      E +   + DPV
Sbjct:   69 YLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAG--WFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG----GPLGE---IVDPLYPGGSFDPL----------GLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPV 251          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 2
Query:   11 GSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADPYTLFVLEMALMGFAEHRRFQ----------DWANPGSMGRQYFLGF---EKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGSLG 583
            GSLPGD+GFDPLGL  DP     F+  KW    E+I+GR+AM   +G      +G+A      + + WF+ G  P A   +++     +L   ++ LMG+ E +R+           DWA P S   + F  F   + Y GG                   D + ++  KL E+K+ RLAMLA+L ++ +    +     P+G+LG
Sbjct:   73 GSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVLGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----SLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKLAEIKHSRLAMLAMLIFYFEAGQGK----TPLGALG 255          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 63/190 (33.16%), Postives = 87/190 (45.79%), Query Frame = 2
Query:    8 SGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADPYTL--------FVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLL 544
            +G  PGDYG+D  GLS DPE    + E       E+I+ R  +LGA+G + PE+L     I    A  WF+ G  I   G  NY  +P  +          +++ LMG  E  R     N G  G     G +  Y G + DP               D  +  + K+KE+KNGRLAM A LG+F Q ++
Sbjct:   77 TGEFPGDYGWDTAGLSADPETFKRYREL------ELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYR----VNGGPAGE----GLDPLYPGEAFDPL----------GLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIV 242          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.738e-13
Identity = 68/208 (32.69%), Postives = 100/208 (48.08%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGS-LGDPV 592
            + +G  PGDYG+D   LS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R       G +G    +    Y GGS DP               D ++  + K+KE+KNGRLAM ++ G+F Q ++      E +   L DPV
Sbjct:   70 YLTGEFPGDYGWDTAELSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----GPLGE---VVDPLYPGGSFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
BLAST of EY756023 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.738e-13
Identity = 68/208 (32.69%), Postives = 101/208 (48.56%), Query Frame = 2
Query:    2 HASGSLPGDYGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGV-IPPAGTYNYWADP--------YTLFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEKYLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFXQVLLQELALPEPIGS-LGDPV 592
            + +G  PGDYG+D  GLS DPE    F + + L   EVI+ R+AMLGA+G + PE+L + G+   E    WF+ G  I   G  +Y  +P          ++  ++ LMG  E  R         +G    +    Y GGS DP              +D ++  + K+KE+KNGRLAM ++ G+F Q ++      E +   L DPV
Sbjct:   70 YLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEAV--WFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG----EPLGE---VVDPLYPGGSFDPL----------GLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252          
The following BLAST results are available for this feature:
BLAST of EY756023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
CB24_PETSP1.229e-1332.69Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB21_SOYBN1.229e-1332.86Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB23_SOLLC1.605e-1332.46Chlorophyll a-b binding protein 13, chloroplastic ... [more]
CB23_PETSP1.605e-1332.21Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB22_MAIZE1.605e-1332.69Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB21_WHEAT1.605e-1332.21Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB4B_SOLLC2.096e-1331.07Chlorophyll a-b binding protein CP24 10B, chloropl... [more]
CB2_DUNSA2.096e-1333.16Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB25_PETSP2.738e-1332.69Chlorophyll a-b binding protein 91R, chloroplastic... [more]
CB23_NICPL2.738e-1332.69Chlorophyll a-b binding protein C, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-002-G02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756023 ID=EY756023; Name=EY756023; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGGCAGCCTCCCCGGAGACTATGGATTCGACCCACTTGGTC
TCTCAGACCCTGAAGGCACAGGAGGGTTCATTGAGCCAAAATGGCTGGCC
TACGGCGAGGTCATCAACGGTCGTTATGCCATGTTGGGAGCTGTGGGAGC
CATTGCACCGGAGATTCTTGGCAAGGCAGGCCTCATTCCGCAAGAAACTG
CCCTGGCCTGGTTCCAAACCGGTGTGATCCCCCCAGCGGGAACATACAAC
TACTGGGCAGACCCTTACACACTTTTCGTCCTGGAAATGGCACTCATGGG
ATTTGCCGAGCACCGGAGATTCCAAGACTGGGCAAATCCAGGATCAATGG
GCAGGCAATACTTCCTCGGATTCGAGAAATACTTGGGAGGATCCGGCGAT
CCGGCTTACCCTGGAGGACCTCTATTCAACCCTCTGGGTCTTGGGAAAGA
TGAGAAGTCAATGAAGGATTTCAAGCTCAAGGAAGTGAAGAATGGAAGAT
TGGCAATGTTGGCAATCTTGGGTTACTTTGNTCAAGTCTTGTTACAGGAG
TTGGCCTTACCAGAACCTATTGGATCACTTGGTGATCCTGTAACAACAAT
GTTTGACTACCTCAAGTTTCACTGAGAGAAAAATTCTTGTTCATGCTTGG
AATTATATATTCAAGCCTTGTCATCCCCACTCTGNTCTATCTACTTTCCC
ATTGGAAAATTTCTATGTGAAAAAGGATGGAACTTGCCGGATTGACTTGT
TATGGCTAACCGGACCCCTTAATATTAATTTTGGACCGGTAATTACCTCG
CGNNNNCCCCCAAAATCNCATACAGCCCAAAATAAATACAATACGATACT
AAACCCCTNCCAAAAAAATAAAAAATACCTTAATTATGGGGGGCCCCC
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