EY755959

Overview
NameEY755959
Unique NameEY755959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18
Identity = 68/211 (32.23%), Postives = 98/211 (46.45%), Query Frame = 3
Query:  123 NVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQ-HPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            N + + NML  A+  G  RF   S++ +Y +  Q          +  P   +  Y   K   E L   Y +  GIE R+ R  N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + VEG++RL + D   P N+G+    +M E+AE++    DR   I   P  E     R  D T  K+ LGW P + L+ GL
Sbjct:  121 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMKLKDGL 330          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFBB_XANCP (dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris GN=rfbB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18
Identity = 72/230 (31.30%), Postives = 107/230 (46.52%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAK----------RVGARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRN-ARIEFRPN-------TEDDPHKRK--PDITKAKQLLGWEPRVTLRKGL 740
            +TNVVGTL +L   +          R   RFL  ST EVYG        ET  +    P    S Y   K  ++ L   +H   G+        N YGP    +  +++   +A+AL  EPL VYGDGKQ R + FVSD  E +  ++    VG  +N+G   E   +E+ + +  ++D++  R + +P        T+   H R+   D +K K  LGWEP  T  +G+
Sbjct:   98 QTNVVGTLALLEAVRDYWKALPDTRRDAFRFLHVSTDEVYGT-----LGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGPYHFPE--KLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGI 320          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.051e-17
Identity = 69/215 (32.09%), Postives = 100/215 (46.51%), Query Frame = 3
Query:  123 NVVGTLNMLGLAKRVGA-RFLLTSTSEVYG-----DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            N + + NML  A+  G  RF   S++ +Y      D +   +    W    P   +  Y   K   E L   Y +  GIE R+ R  N YGP      GR    + F  +AL   +   ++GDG QTRSF F+ + VEG++RL + D   P N+G+    +M E+AE+V    ++   I   P  E     R  D T  K+ LGW P + L+ GL
Sbjct:  114 NTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTVVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPGPE-GVRGRNSDNTLIKEKLGWAPTMRLKDGL 323          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17
Identity = 66/212 (31.13%), Postives = 100/212 (47.17%), Query Frame = 3
Query:  123 NVVGTLNMLGLAKRVGA-RFLLTSTSEVYGD--PLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGR--VVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            N + + NM+  A+  G  RF   S++ +Y +   L+         +  P   +  Y   K   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +   ++GDG QTRSF F+ + VEG++RL + D   P N+G+    +M E+AE+V    ++   I   P  E     R  D    K+ LGW P + L++GL
Sbjct:  119 NTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEKLGWAPNMRLKEGL 329          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17
Identity = 71/220 (32.27%), Postives = 106/220 (48.18%), Query Frame = 3
Query:  120 TNVVGTLNMLGLAKR--VGARFLLTSTSEVYGDPLQHPQAET-YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNA-RIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFR 764
            +N+VGT  +L  A R  +G RFL  ST EVYG        +T  W   +P+   S Y   K  ++ L + YH+  G++  + R  N YGPR   +  +++  FV + L    + VYGDG+  R +  VSD   GL   +     G  +++G   E T LEL E++ E     A RI F  + +    +   D +K    LG+ PRV    G+   VA +R
Sbjct:  103 SNLVGTQVLLDAALRHHIG-RFLHVSTDEVYGS------IDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWYR 313          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.415e-16
Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRN-ARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADF-RHR 770
            +TNV GT  +L  A R G A F+  ST EVYG  L+H      W    P+   S Y   K + + L + +H   G++ R+ R  N YGPR   +  +++  F+   +    + +YGDG   R +  V D V G+  +      G  +N+G     +  EL  ++ E    +   +E+  + +    +   D T+ ++ LG+ P V L  GL   VA + +HR
Sbjct:  100 RTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADGLAATVAWYHKHR 314          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15
Identity = 61/213 (28.64%), Postives = 106/213 (49.77%), Query Frame = 3
Query:  123 NVVGTLNMLGLAKRVGARFLLTSTS--EVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCID-DGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMV 752
            NV+GT+N+L + ++     ++ ++S   VYG+P   P  E +     PI   S Y   K   E     Y+R  GIE  I R  N YG R     +  V+S F+ + L+ +   ++GDG QTR F +V D+ +  +  +   +    N+G   E ++ EL ++++  I       +    E + ++   DI KA+  LGW+P + L++G+  +V
Sbjct:   91 NVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKN-EIVNIGTGKETSVNELFDIIKHEIGFRGEAIYDKPREGEVYRIYLDIKKAES-LGWKPEIDLKEGIKRVV 296          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFFG_HAEIN (dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae GN=rffG PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14
Identity = 66/233 (28.33%), Postives = 106/233 (45.49%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAK----------RVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP-FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPN-----------TEDDPH---KRKPDITKAKQLLGWEPRVTLRKGL 740
            +TN+VGT  +L +AK          +   RF   ST EVYGD      A T     +P    S Y   K  +  L   +HR  G+   I    N YG     +  +++   ++ A+  +PL +YGDG+Q R + FV D V+    ++    VG  +N+G   E T LE+ + + ++++  A    +PN            +D P    +   D +K    LGW+P++T  +GL
Sbjct:   99 QTNIVGTYTLLEVAKNYWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHP---SSPYSASKAASNHLVQAWHRTYGLPVIITNSSNNYGAYQHAE--KLIPLMISNAVMGKPLPIYGDGQQIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELA--PSKPNHIKYYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGL 324          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFBB_NEIGO (dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrhoeae GN=rfbB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.855e-14
Identity = 65/231 (28.14%), Postives = 99/231 (42.86%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLA----------KRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRNA------------RIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            +TN+VGT ++L  A          KR   RF   ST EVYGD       +  +    P    S Y   K  A+ L   + R   + + ++   N YGPR   +  +++   +  AL  +PL VYGDG Q R + FV D    L +++    VG  +N+G   E T LE+ + +  +++  A             I F  +      +   D  K ++ LGW P  T   GL
Sbjct:  104 RTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDL---HGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPE--KLIPLMILNALSGKPLPVYGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGL 329          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: TGDS_MOUSE (dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.397e-14
Identity = 65/230 (28.26%), Postives = 103/230 (44.78%), Query Frame = 3
Query:   99 RAVGVNKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIR-LMEGDHVGPFNLGNPGEFTMLELA-EVVQEIIDRNARIE---FRPNTEDDPHK--RKPDITKAKQLLGWEPRVTLRKGLPLMVADFR 764
            RA      NV GT  ++  A   G  +F+  ST EVYG  L     E+     +P    + Y   K  AE     Y         I R  N YGP    +  RV+  F++         ++G G Q R+F + +D+VE  +  L +G+    +N+G   E ++++LA E++Q I + N+  E   +     D PH   R P  ++    LGW+P+V   +G+   V  +R
Sbjct:  110 RAFEFTYVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQEFDES-----SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSSNVYGPHQYPE--RVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYR 332          
The following BLAST results are available for this feature:
BLAST of EY755959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GME1_ORYSI4.717e-1832.23GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp.... [more]
RFBB_XANCP8.045e-1831.30dTDP-glucose 4,6-dehydratase OS=Xanthomonas campes... [more]
GME2_ORYSJ1.051e-1732.09GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp.... [more]
GME_ARATH2.341e-1731.13GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana ... [more]
ACBB_ACTS52.341e-1732.27dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (... [more]
STRE_STRGR4.415e-1628.83dTDP-glucose 4,6-dehydratase OS=Streptomyces grise... [more]
GALE_METJA2.191e-1528.64Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]
RFFG_HAEIN1.420e-1428.33dTDP-glucose 4,6-dehydratase OS=Haemophilus influe... [more]
RFBB_NEIGO1.855e-1428.14dTDP-glucose 4,6-dehydratase OS=Neisseria gonorrho... [more]
TGDS_MOUSE5.397e-1428.26dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755959 ID=EY755959; Name=EY755959; organism=Citrus sinensis; type=EST; length=889bp
CCCGCGTCCGAATTAAATTTACTTAATTTGTTTATTATTTTTGTTGAAAC
CTGTTGTTAATTTGTTTGAAGTTTGAATTCCTTTGACTGTTATTTTTGCG
TGCGGTGGGGGTGAACAAGACGAACGTGGTGGGGACACTCAACATGTTAG
GGCTAGCTAAAAGAGTTGGGGCACGGTTCTTGTTAACAAGCACTAGTGAA
GTGTACGGTGACCCGTTACAGCATCCGCAGGCCGAGACCTACTGGGGCAA
TGTCAACCCTATCGGTGTAAGAAGCTGTTATGATGAGGGCAAGCGCACAG
CAGAGACCTTGACCATGGACTATCATCGAGGACTTGGAATTGAGGCGAGG
ATTGCTAGGATTTTTAACACTTATGGACCACGAATGTGCATTGATGATGG
TCGTGTTGTGAGCAACTTTGTCGCCCAAGCGTTGAGGAAGGAGCCATTGA
CTGTTTATGGCGATGGAAAACAGACTAGAAGTTTCCAATTCGTTTCAGAC
CTGGTTGAGGGCCTAATAAGGCTAATGGAGGGCGATCATGTCGGTCCTTT
TAACCTCGGCAATCCTGGTGAATTCACCATGCTTGAACTAGCTGAGGTTG
TCCAAGAGATAATAGACCGAAATGCAAGGATAGAGTTCAGGCCAAACACA
GAGGATGATCCACATAAAAGGAAGCCAGACATTACAAAGGCTAAACAGCT
TCTTGGGTGGGAGCCAAGAGTGACCCTCCGGAAGGGGCTTCCTCTCATGG
TTGCCGACTTCCGGCATCGAATTTTTGGTGACCAAAAGAANCNNTGTGTG
NTGNTGGAAGAAGTGATGCCACTTCTTTCTCGATGTACTCTGCTAACTAA
ATTCCCNATGAGTGNTGGGAAAACTGNAGATATATTAAT
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