EY755959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14 Identity = 59/213 (27.70%), Postives = 101/213 (47.42%), Query Frame = 3 Query: 117 KTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-IRLMEGDHVGPFNLGNPGEFTMLELAEVVQEI--IDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740 K N+ GT +L K G RF+ ST EVYG+ + + + + + Y K AE L M Y R G+ R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E + L +G+ +N+G E ++++A + ++ ID ++ I++ N + + D K K+ LGW R +GL Sbjct: 105 KNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDASVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKK-LGWCERTNWEEGL 312
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14 Identity = 61/213 (28.64%), Postives = 100/213 (46.95%), Query Frame = 3 Query: 117 KTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEI--IDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740 K N+ GT +L K G RF+ ST EVYG+ + + + + + Y K AE L M Y R G+ R N YGP + +++ F+ A+R + L ++GDG RS+ + D+ E ++ VG +N+G E + ++A+ + ++ +D A I+F N + + D K K+ LGW R T +GL Sbjct: 105 KNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDALVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMRGQVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKK-LGWSERTTWEEGL 312
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.678e-13 Identity = 59/213 (27.70%), Postives = 99/213 (46.48%), Query Frame = 3 Query: 117 KTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-IRLMEGDHVGPFNLGNPGEFTMLELAEVVQEII--DRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740 K N+ GT +L K G RF+ ST EVYG+ + + + + + Y K AE L M Y R G+ R N YGP + +++ F+ A+ +PL ++GDG RS+ + D+ E + L +G+ +N+G E ++++A + ++ D + I+F N + + D K K+ LGW+ R GL Sbjct: 107 KNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNH--EASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKK-LGWQERTNWEDGL 314
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMA (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A GN=rfbB1 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.967e-13 Identity = 62/231 (26.84%), Postives = 97/231 (41.99%), Query Frame = 3 Query: 117 KTNVVGTLNMLGLA----------KRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRNA------------RIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740 +TN+VGT N+L A K RF ST EVYGD + + P S Y K +++ L + R G+ + N YGP + +++ + AL +PL VYGDG Q R + FV D L +++ VG +N+G E +E+ + + +++ A I F + + D K ++ LGW+P T GL Sbjct: 99 QTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDL---SGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLETFESGL 324
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: TGDS_BOVIN (dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.793e-13 Identity = 62/230 (26.96%), Postives = 102/230 (44.35%), Query Frame = 3 Query: 99 RAVGVNKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFR---PNTEDDP--HKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFR 764 RA NV GT ++ A +F+ ST EVYG L E+ +P + Y K AE Y I R N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++ G +N+G E ++L+LA E++Q I + N+ E +D P R P ++ LGW P+V ++G+ + +R Sbjct: 110 RAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYR 332
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: TGDS_HUMAN (dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.329e-12 Identity = 60/230 (26.09%), Postives = 100/230 (43.48%), Query Frame = 3 Query: 99 RAVGVNKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVGP-FNLGNPGEFTMLELA-EVVQEIIDRNARIEFR-----PNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGLPLMVADFR 764 RA NV GT ++ A +F+ ST EVYG L E+ +P + Y K AE Y I R N YGP + +V+ F++ ++G G QTR+F + +D+VE + +++ G +N+G E ++++LA E++Q I + N+ E N R P ++ LGW P+V ++G+ + +R Sbjct: 110 RAFEFTYVNVYGTHVLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDES-----SPKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQYPE--KVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYR 332
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: LPSL_RHIME (UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti GN=lspL PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.867e-12 Identity = 64/233 (27.47%), Postives = 103/233 (44.21%), Query Frame = 3 Query: 123 NVVGTLNMLGLAKRVGARFL-LTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL-----MEGDHVGP---------------FNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHK--RKPDITKAKQLLGWEPRVTLRKGLPLMV 752 N+VG+ NML LAK + + L L STS +YG + P AE + P+ + Y K++ E + Y + R F YGP D + FV P+ +YG+G+ +R F ++ DLVE ++RL E + V P N G ++ E V++ + R A P + D + PD+ +A L G++P V++ +G+ V Sbjct: 103 NLVGSWNMLELAKAIAPKHLMLASTSSIYGANEKIPFAEADRAD-EPM---TLYAATKKSMELMAHSYAHLYKVPTTSFRFFTVYGPWGRPD--MALFKFVDAIHNGRPIDIYGEGRMSRDFTYIDDLVESIVRLSHVPPSEENRVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPMQQGDVPRTFASPDLLEA--LTGFKPSVSVEEGVARFV 327
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFBB_NEIMB (dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B GN=rfbB1 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12 Identity = 61/231 (26.41%), Postives = 96/231 (41.56%), Query Frame = 3 Query: 117 KTNVVGTLNMLGLAKRV----------GARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRNA------------RIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740 +TN+VGT N+L A+ RF ST EVYGD + + P S Y K +++ L + R G+ + N YGP + +++ + AL +PL VYGDG Q R + FV D L +++ VG +N+G E +E+ + + +++ A I F + + D K ++ LGW P T GL Sbjct: 99 QTNIVGTFNLLEAARAYWQQMPSEQHEAFRFHHISTDEVYGDL---GGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGL 324
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFFG_ECOLI (dTDP-glucose 4,6-dehydratase OS=Escherichia coli (strain K12) GN=rffG PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.470e-11 Identity = 60/231 (25.97%), Postives = 97/231 (41.99%), Query Frame = 3 Query: 117 KTNVVGTLNMLGLA----------KRVGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLMEGDHVG-PFNLGNPGEFTMLELAEVVQEIIDRNA------------RIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740 +TN+VGT +L A K+ RF ST EVYGD + ++ P S Y K +++ L + R G+ I N YGP + +++ + AL + L VYG+G+Q R + +V D L + VG +N+G E L++ E + E+++ A I F + + D +K + LGW P+ T G+ Sbjct: 99 ETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDL---HSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGM 324
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11 Identity = 66/225 (29.33%), Postives = 96/225 (42.67%), Query Frame = 3 Query: 123 NVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQAETY-WGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRV----------VSNFVAQAL-RKEPLTVYG------DGKQTRSFQFVSDLVEGLIR----LMEGDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 728 NV+GTL +L A G F+ +ST YG P P E++ +NP Y K E DY G+ + I R FN G +GR+ + + AL R+E V+G DG R + V DL + +R L+EG NLG T+ EL + ++++ R I + E D + KA+Q+LGWEP+ L Sbjct: 95 NVIGTLTLLSAALAAGIDAFVFSSTCATYGLPDSVPMDESHKQAPINP------YGRTKWICEQALKDYGLYKGLRSVILRYFNAAGADF---EGRIGEWHEPETHAIPLAIDAALGRREGFKVFGTDYDTRDGTCVRDYIHVLDLADAHVRAVDYLLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGDSTTLVANNDKARQVLGWEPQYDL 310 The following BLAST results are available for this feature:
BLAST of EY755959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY755959 ID=EY755959; Name=EY755959; organism=Citrus sinensis; type=EST; length=889bpback to top |