EY755959

Overview
NameEY755959
Unique NameEY755959
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.507e-11
Identity = 53/215 (24.65%), Postives = 99/215 (46.05%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKR--VGARFLLTSTSEVYGDPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRL---MEGDHVG--PFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            + N++GT N+L   ++  +  R ++ S+ + YGD    P  E       P+  +  YD  K  A+ ++  Y    G+   I R  N YG    ++  R++   +   L  E   +  DG   R + ++ D V+  + L   ME +++    FN  N  + T+LEL E + + ++ N + +      ++   +     KA++LL W P  T+ +GL
Sbjct:  101 EANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENM-----PLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGGD-LNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAEKMEENNLAGEAFNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQGSNEIKHQYLSAEKARKLLNWTPAYTIDEGL 309          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: EXOB_RHILT (UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii GN=exoB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 66/232 (28.45%), Postives = 100/232 (43.10%), Query Frame = 3
Query:  105 VGVNKTNVVGTLNMLGLAKRVGAR-FLLTSTSEVYGDPLQHPQAETYWG-NVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRV----------VSNFVAQAL-RKEPLTVYG------DGKQTRSFQFVSDLVEGLIRLME-----GDHVGPFNLGNPGEFTMLELAEVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTL 728
            V   + NV+GTL +L  A+  G   F+ +ST   YG P   P  ET+    +NP      Y   K   E    DY +   + + + R FN  G      +GR+          +   +  AL R++   V+G      DG   R +  V DL +  +R +E     GD V   NLG     T+ EL   ++E+ +R   +E+    E D H    +  KA+ +LGW P+  L
Sbjct:   89 VSFYENNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVPINP------YGRTKYIVEQALADYDQYGSLRSVVLRYFNAAGADF---EGRIGEWHQPETHAIPLAIDAALGRRQGFKVFGSDYETRDGTCVRDYIHVLDLADAHVRAVEYLLKGGDSVA-LNLGTGTGTTVKELLGAIEEVSNRPFPVEYIGRREGDSHTLVANNDKARDVLGWVPQYDL 310          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 62/217 (28.57%), Postives = 93/217 (42.86%), Query Frame = 3
Query:  174 RFLLTSTSEVYG----DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLME---GDHVGP-FNLGNP-GEFTMLELAEVVQEIIDRN-ARIEFRP--------------NTEDDPHKRKPDITKAKQLLGWEPRVTLRK 734
            R +  STSEVYG           +    G +N    R  Y   K+  + +   Y    G++  + R FN  GPR+       I   R ++  +   +   P+ +   GKQ R F  +SD +E L R++E   G   G   N+GNP  E ++ ELAE++    +R+  R  F P                  D   RKP I  AK+ L WEP+V + +
Sbjct:  426 RIIFPSTSEVYGMCTDKNFDEDSSNLVVGPINK--QRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEE 640          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: RFBB_SALTY (dTDP-glucose 4,6-dehydratase OS=Salmonella typhimurium GN=rfbB PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 60/233 (25.75%), Postives = 98/233 (42.06%), Query Frame = 3
Query:  117 KTNVVGTLNMLGLAKRVGA----------RFLLTSTSEVYGDPLQHPQAET------YWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL-IRLMEGDHVGPFNLGNPGE-------FTMLELA-EVVQEIIDRNARIEFRPNTEDDPHKRKPDITKAKQLLGWEPRVTLRKGL 740
            +TN+VGT  +L +A++  +          RF   ST EVYGD L HP           +         S Y   K +++ L   + R  G+   +    N YGP    +  +++   +  AL  +PL +YG G Q R + +V D    L + + EG     +N+G   E       FT+ +L  E+V +      +I +  +      +   D  K  + LGW+P  T   G+
Sbjct:   98 ETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGI 327          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: ARNA_SALPC (Bifunctional polymyxin resistance protein arnA OS=Salmonella paratyphi C (strain RKS4594) GN=arnA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 61/217 (28.11%), Postives = 94/217 (43.32%), Query Frame = 3
Query:  174 RFLLTSTSEVYG----DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM--EGDHVGP--FNLGNP-GEFTMLELAEVVQEIIDRNA-RIEFRP---------------NTEDDPHKRKPDITKAKQLLGWEPRVTLR 731
            R +  STSEVYG          ++    G VN    R  Y   K+  + +   Y    G+   + R FN  GPR+       I   R ++  +   +   P+ +   G+Q R F  + D +E L R++  EGD       N+GNP  E ++ ELA ++ +  D++  R  F P                 +D  H RKP I  A++ LGWEP + +R
Sbjct:  426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAH-RKPSIDNARRCLGWEPSIAMR 639          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: ARNA_SALNS (Bifunctional polymyxin resistance protein arnA OS=Salmonella newport (strain SL254) GN=arnA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 61/217 (28.11%), Postives = 94/217 (43.32%), Query Frame = 3
Query:  174 RFLLTSTSEVYG----DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM--EGDHVGP--FNLGNP-GEFTMLELAEVVQEIIDRNA-RIEFRP---------------NTEDDPHKRKPDITKAKQLLGWEPRVTLR 731
            R +  STSEVYG          ++    G VN    R  Y   K+  + +   Y    G+   + R FN  GPR+       I   R ++  +   +   P+ +   G+Q R F  + D +E L R++  EGD       N+GNP  E ++ ELA ++ +  D++  R  F P                 +D  H RKP I  A++ LGWEP + +R
Sbjct:  426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAH-RKPSIDNARRCLGWEPSIAMR 639          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: ARNA_SALDC (Bifunctional polymyxin resistance protein arnA OS=Salmonella dublin (strain CT_02021853) GN=arnA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 61/217 (28.11%), Postives = 94/217 (43.32%), Query Frame = 3
Query:  174 RFLLTSTSEVYG----DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM--EGDHVGP--FNLGNP-GEFTMLELAEVVQEIIDRNA-RIEFRP---------------NTEDDPHKRKPDITKAKQLLGWEPRVTLR 731
            R +  STSEVYG          ++    G VN    R  Y   K+  + +   Y    G+   + R FN  GPR+       I   R ++  +   +   P+ +   G+Q R F  + D +E L R++  EGD       N+GNP  E ++ ELA ++ +  D++  R  F P                 +D  H RKP I  A++ LGWEP + +R
Sbjct:  426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAH-RKPSIDNARRCLGWEPSIAMR 639          
BLAST of EY755959 vs. ExPASy Swiss-Prot
Match: ARNA_SALCH (Bifunctional polymyxin resistance protein arnA OS=Salmonella choleraesuis GN=arnA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.294e-11
Identity = 61/217 (28.11%), Postives = 94/217 (43.32%), Query Frame = 3
Query:  174 RFLLTSTSEVYG----DPLQHPQAETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGLGIEARIARIFNTYGPRMC------IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLIRLM--EGDHVGP--FNLGNP-GEFTMLELAEVVQEIIDRNA-RIEFRP---------------NTEDDPHKRKPDITKAKQLLGWEPRVTLR 731
            R +  STSEVYG          ++    G VN    R  Y   K+  + +   Y    G+   + R FN  GPR+       I   R ++  +   +   P+ +   G+Q R F  + D +E L R++  EGD       N+GNP  E ++ ELA ++ +  D++  R  F P                 +D  H RKP I  A++ LGWEP + +R
Sbjct:  426 RVVFPSTSEVYGMCTDASFDEDKSNLIVGPVNK--PRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDSLSAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVASRSYYGKGYQDVAH-RKPSIDNARRCLGWEPSIAMR 639          
The following BLAST results are available for this feature:
BLAST of EY755959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
YFNG_BACSU2.507e-1124.65Putative sugar dehydratase/epimerase yfnG OS=Bacil... [more]
EXOB_RHILT4.276e-1128.45UDP-glucose 4-epimerase OS=Rhizobium leguminosarum... [more]
ARNA_KLEP74.276e-1128.57Bifunctional polymyxin resistance protein arnA OS=... [more]
RFBB_SALTY7.294e-1125.75dTDP-glucose 4,6-dehydratase OS=Salmonella typhimu... [more]
ARNA_SALPC7.294e-1128.11Bifunctional polymyxin resistance protein arnA OS=... [more]
ARNA_SALNS7.294e-1128.11Bifunctional polymyxin resistance protein arnA OS=... [more]
ARNA_SALDC7.294e-1128.11Bifunctional polymyxin resistance protein arnA OS=... [more]
ARNA_SALCH7.294e-1128.11Bifunctional polymyxin resistance protein arnA OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755959 ID=EY755959; Name=EY755959; organism=Citrus sinensis; type=EST; length=889bp
CCCGCGTCCGAATTAAATTTACTTAATTTGTTTATTATTTTTGTTGAAAC
CTGTTGTTAATTTGTTTGAAGTTTGAATTCCTTTGACTGTTATTTTTGCG
TGCGGTGGGGGTGAACAAGACGAACGTGGTGGGGACACTCAACATGTTAG
GGCTAGCTAAAAGAGTTGGGGCACGGTTCTTGTTAACAAGCACTAGTGAA
GTGTACGGTGACCCGTTACAGCATCCGCAGGCCGAGACCTACTGGGGCAA
TGTCAACCCTATCGGTGTAAGAAGCTGTTATGATGAGGGCAAGCGCACAG
CAGAGACCTTGACCATGGACTATCATCGAGGACTTGGAATTGAGGCGAGG
ATTGCTAGGATTTTTAACACTTATGGACCACGAATGTGCATTGATGATGG
TCGTGTTGTGAGCAACTTTGTCGCCCAAGCGTTGAGGAAGGAGCCATTGA
CTGTTTATGGCGATGGAAAACAGACTAGAAGTTTCCAATTCGTTTCAGAC
CTGGTTGAGGGCCTAATAAGGCTAATGGAGGGCGATCATGTCGGTCCTTT
TAACCTCGGCAATCCTGGTGAATTCACCATGCTTGAACTAGCTGAGGTTG
TCCAAGAGATAATAGACCGAAATGCAAGGATAGAGTTCAGGCCAAACACA
GAGGATGATCCACATAAAAGGAAGCCAGACATTACAAAGGCTAAACAGCT
TCTTGGGTGGGAGCCAAGAGTGACCCTCCGGAAGGGGCTTCCTCTCATGG
TTGCCGACTTCCGGCATCGAATTTTTGGTGACCAAAAGAANCNNTGTGTG
NTGNTGGAAGAAGTGATGCCACTTCTTTCTCGATGTACTCTGCTAACTAA
ATTCCCNATGAGTGNTGGGAAAACTGNAGATATATTAAT
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