EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.435e-37
Identity = 73/116 (62.93%), Postives = 89/116 (76.72%), Query Frame = -2
Query:  266 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 613
            N GYF+QPTVFSDVTDDM IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FT   D A T+  AL++GTVW+NCY V  A  PFGG+K+SG GRE G Y  + Y +VK V
Sbjct:  377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.435e-37
Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = -2
Query:  266 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 613
            N GYFVQPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AGVFTK  D A T+  AL+AGTVW+NCY V  A  PFGG+K+SG GRE G Y  + Y +VK V
Sbjct:  377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.435e-37
Identity = 73/116 (62.93%), Postives = 89/116 (76.72%), Query Frame = -2
Query:  266 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 613
            N GYF+QPTVFSDVTDDM IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FT   D A T+  AL++GTVW+NCY V  A  PFGG+K+SG GRE G Y  + Y +VK V
Sbjct:  377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 1.875e-37
Identity = 74/118 (62.71%), Postives = 88/118 (74.58%), Query Frame = -2
Query:  254 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 607
            GYF+QPTVF DV D M IA++EIFGPV  ILKFK  ++V+ RAN + +GLAA VFTK  D AN + +AL+AGTVW+NCYDVF A  PFGGYK+SG GRE G Y L AY +VK V   V
Sbjct:  395 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.124e-37
Identity = 73/118 (61.86%), Postives = 88/118 (74.58%), Query Frame = -2
Query:  254 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 607
            GYF+QPTVF DV D M IA++EIFGPV  ILKFK  ++V+ RAN + +GLAA VFTK  D AN + +AL+AGTVW+NCY+VF A  PFGGYK+SG GRE G Y L AY +VK V   V
Sbjct:  395 GYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYNVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 7.124e-37
Identity = 74/116 (63.79%), Postives = 89/116 (76.72%), Query Frame = -2
Query:  266 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 613
            N GYFVQPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AGVFT   D A T+  AL+AGTVW+NCY V  A  PFGG+K+SG GRE G Y  + Y +VK V
Sbjct:  377 NKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTNDIDKAVTISSALQAGTVWVNCYGVVTAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.215e-36
Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = -2
Query:  254 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 613
            N GYF+QPTVFS+VTD+M IA++EIFGPVQ I+KFK  D+VI+RAN T +GLAAGVFTK  D A T+  AL+AGTVW+NCY       PFGG+K+SG GRE G Y L+ Y +VK V   +
Sbjct:  116 NKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTFYGLAAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLHEYTEVKTVTMKI 235          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.073e-36
Identity = 68/129 (52.71%), Postives = 97/129 (75.19%), Query Frame = -2
Query:  236 AI*N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAWL 622
            AI + GYF+QPT+F+DVT+DM I QDEIFGPV S++KFK  ++ I+ AN T++GLAAG+ ++  D  NT+ R+++AG +W+NCY  FD   P+GGYK+SG  RE G+ +L+ YLQ K+VV P+ N  W+
Sbjct:  373 AIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 2.707e-36
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = -2
Query:  254 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 613
            N G+FVQPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GLAAGVFTK  D A T+  AL+AG VW+NCY +  A  PFGG+K+SG GRE G + L  Y ++K V   +
Sbjct:  377 NKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.707e-36
Identity = 72/116 (62.07%), Postives = 88/116 (75.86%), Query Frame = -2
Query:  266 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 613
            N GYF+QPTVFS+V+D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL AG FTK  D A T+  AL+AGTVW+NCY V  A  PFGG+K+SG GRE G Y  + Y +VK V
Sbjct:  376 NKGYFIQPTVFSNVSDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLFAGSFTKDLDKAITVSAALQAGTVWVNCYGVVSAQCPFGGFKMSGNGREMGEYGFHEYTEVKTV 491          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
AL1A1_SHEEP1.435e-3762.93Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
AL1A1_HUMAN1.435e-3764.66Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_BOVIN1.435e-3762.93Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
ALDH2_HUMAN1.875e-3762.71Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
ALDH2_PONAB7.124e-3761.86Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
AL1A1_MACFA7.124e-3763.79Retinal dehydrogenase 1 OS=Macaca fascicularis GN=... [more]
ALDH2_MACPR1.215e-3660.83Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=... [more]
AL2C4_ARATH2.073e-3652.71Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]
AL1A1_RAT2.707e-3660.00Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL1A1_HORSE2.707e-3662.07Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
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