EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_HUMAN (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PT+  +VT DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL++K V
Sbjct:  419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: SSDH_GORGO (Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PT+  +VT DML   +E FGP+  ++KF   ++ I  AN    GLA   +++       +   L  G V +N   +     PFGG K SG+GRE   Y ++ YL++K V
Sbjct:  419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 530          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACSU (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus subtilis GN=rocA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 36/103 (34.95%), Postives = 56/103 (54.37%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            GYF+QPT+F+DV ++  + Q+EIFGPV +I K ++ D ++  AN T +GL   + TK+             G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GYFIQPTIFADVDENARLMQEEIFGPVVAICKARDFDHMLEIANNTEYGLTGALLTKNRAHIERAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDA_ECOLI (Lactaldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=aldA PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.206e-13
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPF-GGYKLSGIGREKGIYSLNAYLQVKAV 607
            GY+  PT+  DV  +M I  +E FGPV  ++ F   +D I  AN + +GL + ++T++ + A   ++ L+ G  +IN  + F+A   F  G++ SGIG   G + L+ YLQ + V
Sbjct:  362 GYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYIN-RENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: LADH_METM7 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0731 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.370e-13
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = -2
Query:  263 DVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF-DAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV 577
            ++ +D L+++ E FGPV  ILK K +++ +  AN +++GL AGVFT   + A  +  +L  G + IN    F    +PFGG K SG+GRE   Y++    + K VV
Sbjct:  356 NIDEDNLLSKIETFGPVLPILKVKNSEEAVSIANNSKYGLQAGVFTNDINKAMKIADSLEYGGIMINSSPTFRKDNMPFGGVKKSGLGREGIKYTVEEMCETKTVV 461          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA2_BACHD (1-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacillus halodurans GN=rocA2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI--NCYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+F+DV     I Q+EIFGPV +  K ++ D  +  AN T +GL   V T +        R    G ++   NC        PFGG+K+SG   + G
Sbjct:  395 GFFIQPTIFADVDPHARIMQEEIFGPVVAFSKARDFDHALEIANNTEYGLTGAVITTNRHHIEKAKRDFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: GABD2_MYCUA (Putative succinate-semialdehyde dehydrogenase [NADP+] 2 OS=Mycobacterium ulcerans (strain Agy99) GN=gabD2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 40/115 (34.78%), Postives = 61/115 (53.04%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVF---DAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PTV +DVT +M  A +E FGP+ SI    + ++ + +AN T +GL A V+  S      +   LR+GTV +N    F     + P GG  +SG+GR  G   L  Y + + +
Sbjct:  367 FYEPTVLTDVTHEMECADNETFGPLVSIYPVADVEEAVEKANDTEYGLNASVWAGSTPEGEKIAARLRSGTVNVNEGYAFAWGSLSAPMGGMGISGVGRRHGPEGLLKYTESQTI 481          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: GABD2_MYCS2 (Putative succinate-semialdehyde dehydrogenase [NADP+] OS=Mycobacterium smegmatis GN=gabD2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 42/115 (36.52%), Postives = 60/115 (52.17%), Query Frame = -2
Query:  266 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN---CYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 601
            F +PTV + VTD+M  A++E FGPV SI   +   + I +AN T +GL A V+  S      +   L+AGTV ++          A P GG K SG+GR  G   +  Y + + V
Sbjct:  367 FYEPTVLTGVTDEMECARNETFGPVVSIYPVESVAEAIEKANDTEYGLNASVWAGSKTEGEAIAAQLQAGTVNVDEGYALAFGSTAAPMGGMKASGVGRRHGADGILKYTESQTV 481          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_OCEIH (1-pyrroline-5-carboxylate dehydrogenase OS=Oceanobacillus iheyensis GN=rocA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 41/121 (33.88%), Postives = 60/121 (49.59%), Query Frame = -2
Query:  260 N*GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGI-GREKGIYSLNAYLQVKAVVQ 613
            N G+FV PT+F D+     I Q+EIFGPV +  K K  D+++  AN T +GL   V + + +  N        G ++ N  C        PFGG+K+SG   +  G   L  +L  K V +
Sbjct:  393 NKGFFVHPTIFKDLDPKARIMQEEIFGPVVAFSKAKSFDELLDIANNTEYGLTGAVISNNRENLNRAQTEFLVGNLYFNRGCTAAIVGYQPFGGFKMSGTDSKAGGPDYLQHFLNAKVVTE 513          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: IOLA1_BACSK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus clausii (strain KSM-K16) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = -2
Query:  239 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINC-YDVFDAAIPFGGYKLSGIG--REKGIYSLNAYLQVKAVVQPVKNPAW 607
            GYF+ PT+F +VT DM I +DEIF PV SI++ K  D+ I+ AN++ F   A +FT +A         + AG + IN       A  PF G+K S  G     G  S++ Y + K V      P++
Sbjct:  365 GYFIGPTIFENVTTDMTIWKDEIFAPVLSIIRVKNLDEGIQIANRSEFANGACLFTTNAAAVRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFYGTLHANGKDSVDFYTRKKVVTARYPKPSF 490          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
SSDH_HUMAN4.206e-1334.82Succinate-semialdehyde dehydrogenase, mitochondria... [more]
SSDH_GORGO4.206e-1334.82Succinate-semialdehyde dehydrogenase, mitochondria... [more]
ROCA_BACSU4.206e-1334.951-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
ALDA_ECOLI4.206e-1334.78Lactaldehyde dehydrogenase OS=Escherichia coli (st... [more]
LADH_METM79.370e-1337.74Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]
ROCA2_BACHD1.598e-1235.921-pyrroline-5-carboxylate dehydrogenase 2 OS=Bacil... [more]
GABD2_MYCUA1.598e-1234.78Putative succinate-semialdehyde dehydrogenase [NAD... [more]
GABD2_MYCS21.598e-1236.52Putative succinate-semialdehyde dehydrogenase [NAD... [more]
ROCA_OCEIH2.087e-1233.881-pyrroline-5-carboxylate dehydrogenase OS=Oceanob... [more]
IOLA1_BACSK2.087e-1236.51Methylmalonate semialdehyde dehydrogenase [acylati... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
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