EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: IOLA_LISMH (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=iolA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 42/117 (35.90%), Postives = 59/117 (50.43%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINC-YDVFDAAIPFGGYKLSGIG--REKGIYSLNAYLQVKAV 607
            G+FV PT+  DVT DM I +DEIF PV S+++ K   + +R AN + F   A +FT +A         + AG + +N       A  PF G+K S  G     G  S++ Y   K V
Sbjct:  361 GHFVGPTILEDVTTDMTIWKDEIFAPVLSVIRVKNLQEAVRVANLSEFANGACIFTNNAKAIRYFREKIDAGMLGVNLGVPAPMAFFPFSGWKSSFYGTLHANGKDSVDFYTHKKVV 477          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 42/124 (33.87%), Postives = 61/124 (49.19%), Query Frame = -2
Query:  239 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDA-AIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAW 607
            G  + P +  +V  DM IA +E FGPV  +++    ++ I   N + FGL   VFTK  + A  +  A+  GTV IN          PF G K SGIG +    S+N   +VK  V  +  P++
Sbjct:  370 GNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSY 493          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ROCA_BACCN (1-pyrroline-5-carboxylate dehydrogenase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rocA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 33/103 (32.04%), Postives = 52/103 (50.49%), Query Frame = -2
Query:  305 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWIN--CYDVFDAAIPFGGYKLSGIGREKG 607
            G+F+QPT+ +DV +D  + ++EIFGPV +  K K+ D  +  AN T +GL   V + +             G ++ N  C        PFGG+ +SG   + G
Sbjct:  395 GWFIQPTIVADVAEDARLMKEEIFGPVVAFCKAKDFDHALAIANNTEYGLTGAVISNNRAHIEKAREDFHVGNLYFNRGCTGAIVGYQPFGGFNMSGTDSKAG 497          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 41/124 (33.06%), Postives = 63/124 (50.81%), Query Frame = -2
Query:  239 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDA-AIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAW 607
            G  + P +   V  DM IA +E FGPV  +++    ++ I   N + FGL   VFT+  + A  +  A+ +GTV IN          PF G K SGIG +    S+N   +VK+ V  + +P++
Sbjct:  370 GNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIMISDAMESGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSY 493          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ASTD_BURPS (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei GN=astD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = -2
Query:  296 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV-WINCYDVFDAAIPFGGYKLSGIGREKGIYS 601
            FV  ++  DVT    +  +E FGP+  I+++ + DD I RAN T FGL+AG+        NT  RA+RAG V W    +   +A PFGG   SG  R    Y+
Sbjct:  358 FVNASIL-DVTPVRELPDEEHFGPLAQIVRYTDLDDAIARANDTAFGLSAGLLADDETVWNTFRRAIRAGIVNWNRPTNGASSAAPFGGAGRSGNHRPSAYYA 459          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ASTD_BURP1 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=astD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = -2
Query:  296 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV-WINCYDVFDAAIPFGGYKLSGIGREKGIYS 601
            FV  ++  DVT    +  +E FGP+  I+++ + DD I RAN T FGL+AG+        NT  RA+RAG V W    +   +A PFGG   SG  R    Y+
Sbjct:  358 FVNASIL-DVTPVRELPDEEHFGPLAQIVRYTDLDDAIARANDTAFGLSAGLLADDETVWNTFRRAIRAGIVNWNRPTNGASSAAPFGGAGRSGNHRPSAYYA 459          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ASTD_BURP0 (N-succinylglutamate 5-semialdehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=astD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = -2
Query:  296 FVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTV-WINCYDVFDAAIPFGGYKLSGIGREKGIYS 601
            FV  ++  DVT    +  +E FGP+  I+++ + DD I RAN T FGL+AG+        NT  RA+RAG V W    +   +A PFGG   SG  R    Y+
Sbjct:  358 FVNASIL-DVTPVRELPDEEHFGPLAQIVRYTDLDDAIARANDTAFGLSAGLLADDETVWNTFRRAIRAGIVNWNRPTNGASSAAPFGGAGRSGNHRPSAYYA 459          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
IOLA_LISMH5.141e-1135.90Methylmalonate semialdehyde dehydrogenase [acylati... [more]
GAPN_NICPL5.141e-1133.87NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ROCA_BACCN6.715e-1132.041-pyrroline-5-carboxylate dehydrogenase OS=Bacillu... [more]
GAPN_WHEAT8.770e-1133.06NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
ASTD_BURPS8.770e-1138.83N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURP18.770e-1138.83N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]
ASTD_BURP08.770e-1138.83N-succinylglutamate 5-semialdehyde dehydrogenase O... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
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