EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1B1_PONAB (Aldehyde dehydrogenase X, mitochondrial OS=Pongo abelii GN=ALDH1B1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31
Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = -2
Query:  248 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 607
            G+F++PTVF  V DDM IA++EIFGPVQ + KFK+ ++VI RAN TR+GLAA VFT+  D A    +AL+AGTVW+N Y++     PFGG+K SG GRE G   L AY +VK V    P KN
Sbjct:  395 GFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKMEEVIERANTTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKN 516          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31
Identity = 66/122 (54.10%), Postives = 85/122 (69.67%), Query Frame = -2
Query:  248 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 607
            G+F++PTVF  V DDM IA++EIFGPVQ + KFK+ ++V+ RAN TR+GLAA VFT+  D A    +AL+AGTVW+N Y++     PFGG+K SG GRE G   L AY +VK V    P KN
Sbjct:  395 GFFIKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKN 516          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.629e-31
Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G+F++PTVFS+VTDDM IA++EIFGPVQ IL+FK  D+VI RAN + FGL A VFT   + A T+  A++AGTVWINCY+  +A  PFGG K SG GRE G   L  Y +VK V
Sbjct:  396 GFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTV 508          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.964e-31
Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G+FV+PTVF+ VTD M IA++EIFGPV S+LKF   D+VI RAN T FGLAAGVFT+    A+ ++  L+AGT WIN Y++    IPFGG+K SGIGRE  + +L  Y Q+K++
Sbjct:  363 GFFVEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDEVIDRANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSI 476          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.786e-30
Identity = 64/124 (51.61%), Postives = 86/124 (69.35%), Query Frame = -2
Query:  245 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 607
            GY++QPTVF+DVTDDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  363 GYYIQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 4.945e-30
Identity = 61/114 (53.51%), Postives = 82/114 (71.93%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            GYF++PTVF DV +DM I ++EIFGPV ++ KFK  D+VI  AN + +GLAAG+ T + +TA  +   + AGTVWIN Y+ F  A+PFGG+  SG+GRE  + +L  YLQVKAV
Sbjct:  400 GYFIKPTVFGDVKEDMRIVKEEIFGPVVTVTKFKSADEVINMANDSEYGLAAGIHTSNINTALKVADRVNAGTVWINTYNDFHHAVPFGGFNASGLGREMSVDALQNYLQVKAV 513          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 6.459e-30
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = -2
Query:  248 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ--PVKN 607
            G++V+PTVFSDVTD+M  +Q+EIFGPVQ I+KFK+ D+VI R N T +G+AA +FT   + + T   A+  GTVW+N Y+ +    PFGGYK SG+ RE G Y+L  Y +VK +V   P KN
Sbjct:  373 GFYVEPTVFSDVTDEMKFSQEEIFGPVQLIMKFKDMDEVIDRCNNTDYGMAAAIFTNDINRSITFTHAMYCGTVWVNTYNHWFPQAPFGGYKKSGLYREMGKYTLQEYTEVKNIVYRIPQKN 494          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_RHIEC (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=betB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.459e-30
Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            GY+VQPTVF+DVTDDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V
Sbjct:  363 GYYVQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSLAALEHYSELKTV 476          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.435e-30
Identity = 64/114 (56.14%), Postives = 81/114 (71.05%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            GYF++PT+FS+VT+DM I Q+EIFGPV +I KFK   DVI+  N T +GLAA V T +  TA  +  ALRAGTVW+N Y+     +PFGGYK SGIGRE G  +L+ Y+Q K V
Sbjct:  374 GYFIEPTIFSNVTEDMKIQQEEIFGPVCTISKFKTKADVIKIGNNTTYGLAAAVHTSNLTTAIEVANALRAGTVWVNSYNTLHWQLPFGGYKESGIGRELGEAALDNYIQTKTV 487          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.102e-29
Identity = 64/124 (51.61%), Postives = 86/124 (69.35%), Query Frame = -2
Query:  245 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 607
            GY+VQPTVF+DVTD+M IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  363 GYYVQPTVFADVTDEMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
AL1B1_PONAB7.629e-3154.92Aldehyde dehydrogenase X, mitochondrial OS=Pongo a... [more]
AL1B1_HUMAN7.629e-3154.10Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
AL1A2_TAEGU7.629e-3158.77Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
BETB_RHILO9.964e-3156.14Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
BETB_RHILW3.786e-3051.61Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
ALDH4_YEAST4.945e-3053.51Potassium-activated aldehyde dehydrogenase, mitoch... [more]
CROM_OMMSL6.459e-3051.64Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]
BETB_RHIEC6.459e-3054.39Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
ALDH_ALTAL8.435e-3056.14Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
BETB_RHIE61.102e-2951.61Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
back to top