EY755955

Overview
NameEY755955
Unique NameEY755955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB1_RHIME (Betaine aldehyde dehydrogenase 1 OS=Rhizobium meliloti GN=betB1 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.629e-28
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = -2
Query:  245 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 607
            G ++QPTVF+DVTD M IA++EIFGPV  +L F +  +VI RAN T FGL+AGVFT     A+ +   L AGT+WIN Y++    IPFGG K SG GRE  + +LN Y ++K V   + PV+ P
Sbjct:  363 GTYIQPTVFADVTDGMTIAREEIFGPVMCVLDFDDEVEVIARANATEFGLSAGVFTADLTRAHRVADRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSVAALNHYTELKTVYVGMGPVEAP 486          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_PSEE4 (Betaine aldehyde dehydrogenase OS=Pseudomonas entomophila (strain L48) GN=betB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G FV PTVF+D TDDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T     A+ ++  L AG  WIN +    A +P GGYK SG+GRE G+ SL  Y ++K+V
Sbjct:  366 GAFVAPTVFTDCTDDMTIVKEEIFGPVMSILSYETEEEVIRRANDTEYGLAAGVCTNDISRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENGVSSLAQYTRIKSV 479          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_BURP8 (Betaine aldehyde dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=betB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G +VQPTVFSD  DDM I ++EIFGPV SIL F + DDVI RAN T +GLAAGV T++   A+  +  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y ++K+V
Sbjct:  365 GQYVQPTVFSDCRDDMKIVREEIFGPVMSILSFVDEDDVIERANDTIYGLAAGVVTENLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGITTLEHYTRIKSV 478          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: ALDH6_YEAST (Magnesium-activated aldehyde dehydrogenase, cytosolic OS=Saccharomyces cerevisiae GN=ALD6 PE=1 SV=4)

HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28
Identity = 58/114 (50.88%), Postives = 80/114 (70.18%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            GYF++PTVF DV +DM I ++EIFGPV ++ KFK  ++ +  AN + FGL +G+ T+S  T   + + L+AGTVWIN Y+ FD+ +PFGG K SG GRE G    +AY +VKAV
Sbjct:  383 GYFIRPTVFYDVNEDMRIVKEEIFGPVVTVAKFKTLEEGVEMANSSEFGLGSGIETESLSTGLKVAKMLKAGTVWINTYNDFDSRVPFGGVKQSGYGREMGEEVYHAYTEVKAV 496          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.045e-28
Identity = 63/121 (52.07%), Postives = 81/121 (66.94%), Query Frame = -2
Query:  248 YFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 604
            +F++PTVF  V DDM IA++EIFGPVQ + KFK+ ++VI RA+ TR+GLAA VFT+  D A    +AL+ GTVW+N Y+V     P GG+K  G GRE G   L AY +VK V    P KN
Sbjct:  390 FFIKPTVFGGVQDDMRIAREEIFGPVQPLFKFKKIEEVIERADNTRYGLAAAVFTQDLDKAMYFTQALQTGTVWVNTYNVVTCHTPLGGFKEPGNGRELGEDGLKAYTEVKTVTIKVPQKN 510          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_PSEU2 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=betB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G FV PTVF+D TD+M I ++EIFGPV SIL +   D+V+RRAN T FGLAAG+ T+  + A+ ++  L AG  WIN +    A +P GGYK SG+GRE GI SL  Y ++K+V
Sbjct:  366 GAFVAPTVFTDCTDEMTIVREEIFGPVMSILGYDTEDEVVRRANDTDFGLAAGIVTRDLNRAHRVIHLLEAGICWINAWGESAAQMPVGGYKQSGVGRENGISSLAQYTRIKSV 479          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_PSEPW (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain W619) GN=betB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.895e-28
Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G FV PTVF+D TDDM I ++EIFGPV SIL ++  ++VIRRAN T +GLAAGV T     A+ ++  L AG  WIN +    A +P GGYK SG+GRE GI SL  Y ++K+V
Sbjct:  366 GAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTEYGLAAGVCTNDITRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENGISSLAQYTRIKSV 479          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_ECOLI (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=betB PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G +V PTVF+D +DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  366 GAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_ECODH (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G +V PTVF+D +DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  366 GAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of EY755955 vs. ExPASy Swiss-Prot
Match: BETB_ECO7I (Betaine aldehyde dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.031e-27
Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = -2
Query:  266 GYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 607
            G +V PTVF+D +DDM I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  366 GAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
The following BLAST results are available for this feature:
BLAST of EY755955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
BETB1_RHIME4.629e-2850.81Betaine aldehyde dehydrogenase 1 OS=Rhizobium meli... [more]
BETB_PSEE46.045e-2852.63Betaine aldehyde dehydrogenase OS=Pseudomonas ento... [more]
BETB_BURP86.045e-2854.39Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
ALDH6_YEAST6.045e-2850.88Magnesium-activated aldehyde dehydrogenase, cytoso... [more]
AL1B1_BOVIN6.045e-2852.07Aldehyde dehydrogenase X, mitochondrial (Fragment)... [more]
BETB_PSEU27.895e-2852.63Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]
BETB_PSEPW7.895e-2853.51Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_ECOLI1.031e-2751.75Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECODH1.031e-2751.75Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO7I1.031e-2751.75Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755955 ID=EY755955; Name=EY755955; organism=Citrus sinensis; type=EST; length=623bp
TTCGGTCGACCACGCGTCCGTTTTTTTTTTCTTTTTACAATAACACTCCA
TACCATTCAAATTTCAGTGAAAGCTGCCTTGATCAACAGACAGGCATCAT
TGTGCTTACAGCACAAAAGAAAGTAAGTTCTTTTAAAGTAAATTATCCAT
TTGCTCCATAATTACAAGCTGATATTAGCACGCTGTCCTTATTCATAAAC
ACAGATTAAAAGGGAGGGGGAACTTCAGGAAACTAAAGCCATGCTGGGTT
CTTCACAGGTTGAACGACGGCCTTTACTTGCAAGTAAGCGTTAAGGCTGT
AAATTCCCTTTTCCCGGCCTATGCCACTCAGCTTGTACCCACCGAAAGGA
ATAGCAGCATCAAACACGTCGTAGCAGTTAATCCATACAGTCCCAGCTCT
CAGTGCACGCATCATGGTGTTTGCAGTGTCTGCACTCTTGGTGAAAACCC
CAGCAGCTAGACCAAAGCGTGTTTTATTTGCTCTTCTTATAACGTCATCA
GTTTCCTTGAACTTCAAGATGGATTGCACCGGGCCAAAGATTTCATCCTG
TGCTATCAACATGTCATCCGTAACATCTGAGAAGACAGTTGGCTGAACAA
AGTAGCCCTAGTTCTAGATCGCG
back to top