EY755915

Overview
NameEY755915
Unique NameEY755915
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.048e-63
Identity = 111/177 (62.71%), Postives = 138/177 (77.97%), Query Frame = 3
Query:  204 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            K +++ L   DPE+  II+ E  RQ   + LI SEN TS +V  A+G+ M NKYSEGYPGARYYGGN++ID  E LCQ+RALEAF + P++WGVNVQSLSGSP+N QVY AL+KPH+R+M L LP GGHLSHGYQT+T+KISAVS +FE+ PYR++  TG IDYD LEK+A L+ PK
Sbjct:   11 KLISSHLSESDPEVDAIIKDEIDRQKHSIVLIASENLTSTAVFDALGTPMCNKYSEGYPGARYYGGNQHIDRMELLCQRRALEAFHVTPDRWGVNVQSLSGSPANLQVYQALMKPHERLMGLHLPDGGHLSHGYQTETRKISAVSTYFESFPYRVDPETGIIDYDTLEKNAVLYRPK 187          

HSP 2 Score: 32.3426 bits (72), Expect = 1.048e-63
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFA 799
            KI VAG SAY RL DY+R+R+ A
Sbjct:  187 KILVAGTSAYCRLIDYKRMREIA 209          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_NEUCR (Putative serine hydroxymethyltransferase, mitochondrial OS=Neurospora crassa GN=NCU05805 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.366e-63
Identity = 108/159 (67.92%), Postives = 132/159 (83.02%), Query Frame = 3
Query:  258 EHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            + EK RQ + + LIPSENFTS +V+ A+GS M NKYSEGYPGARYYGGNE+ID +E LCQ RALE F LDP++WGVNVQ+LSG+P+N  VY+AL+  HDR+M LDLPHGGHLSHGYQT TKKIS +S +FET+PYRL+E TGYIDY++LE+ A  + PK
Sbjct:   67 QKEKQRQKQFINLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDASERLCQDRALETFGLDPKEWGVNVQALSGAPANLYVYSALMDTHDRLMGLDLPHGGHLSHGYQTPTKKISFISKYFETLPYRLDEKTGYIDYNKLEELAITYRPK 225          

HSP 2 Score: 32.7278 bits (73), Expect = 1.366e-63
Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRK 793
            KI VAGASAY+RL DY R+R+
Sbjct:  225 KIIVAGASAYSRLIDYARLRE 245          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 1.367e-63
Identity = 110/177 (62.15%), Postives = 138/177 (77.97%), Query Frame = 3
Query:  204 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            K + + L   DPE+  II+ E  RQ   ++LI SENFTS SV  A+G+ ++NKYSEGYPGARYYGGNE+ID  E LCQ+RAL+AF + P+KWGVNVQ+LSGSP+N QVY A++KPH+R+M L LP GGHLSHGY T+ +KISAVS +FE+ PYR+N  TG IDYD LEK+A L+ PK
Sbjct:   11 KLITSHLVDTDPEVDSIIKDEIERQKHSIDLIASENFTSTSVFDALGTPLSNKYSEGYPGARYYGGNEHIDRMEILCQQRALKAFHVTPDKWGVNVQTLSGSPANLQVYQAIMKPHERLMGLYLPDGGHLSHGYATENRKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPK 187          

HSP 2 Score: 31.9574 bits (71), Expect = 1.367e-63
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFA 799
            K+ VAG SAY RL DY+R+R+ A
Sbjct:  187 KVLVAGTSAYCRLIDYKRMREIA 209          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3)

HSP 1 Score: 232.646 bits (592), Expect = 8.754e-63
Identity = 109/167 (65.27%), Postives = 133/167 (79.64%), Query Frame = 3
Query:  234 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            DPE+ ++++ EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D  E LCQ+RALEAF LDP +WGVNVQ  SGSP+N  VYTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN  TG IDY+QL  +A LF P+
Sbjct:   53 DPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPR 219          

HSP 2 Score: 30.0314 bits (66), Expect = 8.754e-63
Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFATTKAICWQICTH 835
            ++ +AG SAYARL DY R+R+      +C ++  H
Sbjct:  219 RLIIAGTSAYARLIDYARMRE------VCDEVKAH 247          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3)

HSP 1 Score: 234.572 bits (597), Expect = 8.757e-63
Identity = 113/177 (63.84%), Postives = 138/177 (77.97%), Query Frame = 3
Query:  204 KQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            K L  PL+  D E+ +II+ E  RQ  GLELI SENF S +V++A+GS + NKYSEGYPG RYYGG E+ID  E LCQKRAL+ + LD + WGVNVQ  SGSP+NF VYTAL++PH RIM LDLP GGHL+HG+ TD KKISA SIFFE+MPY++N  TGYI+YDQLE++A LF P+
Sbjct:   20 KMLAQPLKDNDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPGQRYYGGTEFIDELEVLCQKRALQVYGLDSQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPR 196          

HSP 2 Score: 28.1054 bits (61), Expect = 8.757e-63
Identity = 13/28 (46.43%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  716 HPLXAKIDVAGASAYARLYDYERIRKFA 799
            HP   ++ +AG S Y+R  DY R+RK A
Sbjct:  194 HP---RLIIAGTSCYSRNLDYARLRKIA 218          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.141e-62
Identity = 109/167 (65.27%), Postives = 131/167 (78.44%), Query Frame = 3
Query:  234 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            DPE+ +++  EK RQ +GLELI SENF S + ++A+GS + NKYSEGYPG RYYGG E +D  E LCQ+RALEAF LDP +WGVNVQ  SGSP+N   YTALL+PHDRIM LDLP GGHL+HGY +D K+ISA SIFFE+MPY+LN  TG IDYDQL  +A LF P+
Sbjct:   53 DPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPR 219          

HSP 2 Score: 30.0314 bits (66), Expect = 1.141e-62
Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFATTKAICWQICTH 835
            ++ +AG SAYARL DY R+R+      +C ++  H
Sbjct:  219 RLIIAGTSAYARLIDYARMRE------VCDEVKAH 247          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.300e-62
Identity = 108/176 (61.36%), Postives = 138/176 (78.41%), Query Frame = 3
Query:  210 LNAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            L+  ++  DPE+ DI+  E++RQ + + LIPSENFTSV+VM  +GS M NKYSEGYPG RYYGGN+YIDMAESLCQKRALE + LDP KWGVNVQSLSG+P+N   Y+A+++  DR+M LDLPHGGHLSHGYQ     KIS +S +F+TM YR++ +TG +DYD L +++ LF PK
Sbjct:   36 LSQHVQEFDPEMYDILTKERSRQKRSITLIPSENFTSVAVMNLLGSEMQNKYSEGYPGQRYYGGNQYIDMAESLCQKRALELYGLDPAKWGVNVQSLSGAPANLYAYSAIMEVGDRMMGLDLPHGGHLSHGYQLQNGNKISYISKYFQTMAYRVDPATGLVDYDTLSETSKLFRPK 211          

HSP 2 Score: 32.3426 bits (72), Expect = 3.300e-62
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFA 799
            K+ VAG SAYAR+ DY+R R+ A
Sbjct:  211 KVIVAGTSAYARVLDYKRFREIA 233          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 9.537e-62
Identity = 107/171 (62.57%), Postives = 132/171 (77.19%), Query Frame = 3
Query:  222 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            L   DPE+ ++++ EK RQ +GLELI SENF   + ++A+GS + NKYSEGYPG RYYGG E +D  E LCQ+RALEAF LDP +WGVNVQ  SGSP+N   YTALL+PHDRIM LDLP GGHL+HGY +D K++SA SIFFE+MPY+LN  TG IDY+QL  +A LF P+
Sbjct:   49 LSDTDPEMWELLQREKDRQCRGLELIASENFCIRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRVSATSIFFESMPYKLNPQTGLIDYEQLALTARLFRPR 219          

HSP 2 Score: 30.0314 bits (66), Expect = 9.537e-62
Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFATTKAICWQICTH 835
            ++ +AG SAYARL DY R+R+      +C ++  H
Sbjct:  219 RLIIAGTSAYARLIDYARMRE------VCDEVKAH 247          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 6.110e-61
Identity = 106/169 (62.72%), Postives = 132/169 (78.11%), Query Frame = 3
Query:  231 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            +DPE+ DI+  E+ RQ   + LIPSENFTS SVM  +GS M NKYSEGYPG RYYGGN++IDMAESLCQKRALE + LDP+ WGVNVQ LSG+P+N   Y+A+++ +DR+M LDLPHGGHLSHGYQ  +  KIS +S +F+TMPY ++  TG IDYD L K++ LF PK
Sbjct:   44 IDPEMYDILTKERKRQKHSITLIPSENFTSKSVMDLLGSEMQNKYSEGYPGERYYGGNQFIDMAESLCQKRALELYNLDPQLWGVNVQPLSGAPANLYAYSAVMETNDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFQTMPYHVDSQTGIIDYDFLSKTSKLFRPK 212          

HSP 2 Score: 31.5722 bits (70), Expect = 6.110e-61
Identity = 13/23 (56.52%), Postives = 19/23 (82.61%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFA 799
            K+ VAGASAY+R+ DY+R ++ A
Sbjct:  212 KVIVAGASAYSRVLDYKRFKEIA 234          
BLAST of EY755915 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.606e-58
Identity = 104/172 (60.47%), Postives = 131/172 (76.16%), Query Frame = 3
Query:  222 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFXPK 734
            ++ VDPE+  I+  E++RQ   + LIPSENFTS +VM  +GS M NKYSEGYPG RYYGGN++ID AESLCQ RAL+ + LDPEKWGVNVQ+LSG+P+N   Y+A+++  DR+M LDLPHGGHLSHGYQ  +  KIS +S +F TMPY +N  TG IDYD L  ++ LF PK
Sbjct:   27 VQEVDPEMFRILSDERSRQKHSVTLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNQFIDKAESLCQARALDLYGLDPEKWGVNVQALSGAPANLYAYSAVMEVGDRLMGLDLPHGGHLSHGYQLPSGTKISYISKYFNTMPYHVNTETGIIDYDTLAMTSKLFRPK 198          

HSP 2 Score: 30.8018 bits (68), Expect = 1.606e-58
Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  731 KIDVAGASAYARLYDYERIRKFA 799
            K+ VAG SAY+R  DY R RK A
Sbjct:  198 KVIVAGTSAYSRKLDYARFRKIA 220          
The following BLAST results are available for this feature:
BLAST of EY755915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GLYC_ASHGO1.048e-6362.71Serine hydroxymethyltransferase, cytosolic OS=Ashb... [more]
GLYM_NEUCR1.366e-6367.92Putative serine hydroxymethyltransferase, mitochon... [more]
GLYC_YEAST1.367e-6362.15Serine hydroxymethyltransferase, cytosolic OS=Sacc... [more]
GLYM_HUMAN8.754e-6365.27Serine hydroxymethyltransferase, mitochondrial OS=... [more]
GLYC_BOVIN8.757e-6363.84Serine hydroxymethyltransferase, cytosolic OS=Bos ... [more]
GLYM_BOVIN1.141e-6265.27Serine hydroxymethyltransferase, mitochondrial OS=... [more]
GLYM_ASHGO3.300e-6261.36Serine hydroxymethyltransferase, mitochondrial OS=... [more]
GLYM_RABIT9.537e-6262.57Serine hydroxymethyltransferase, mitochondrial OS=... [more]
GLYM_KLULA6.110e-6162.72Serine hydroxymethyltransferase, mitochondrial OS=... [more]
GLYM_CANGA1.606e-5860.47Serine hydroxymethyltransferase, mitochondrial OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-D05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755915 ID=EY755915; Name=EY755915; organism=Citrus sinensis; type=EST; length=899bp
CAACAAACTTTGCAGAAACAGAACAACATCTTGCAGCGGGAGAGTGAGAA
GCAAAAATGGCCATGGCTCTGGCTCTTCGCAGGCTCTCATCTTCCCTCGA
CAAACCCACTCGTCCTCTCTTCAATGGCTCCTCCCTCTACTACATGTCAT
CTTTGCCAAATGAAGCTGTTTACGAGAAAGAGAAAAATGGTGTCACTTGG
CCAAAACAACTGAATGCTCCACTTGAGGTCGTTGATCCTGAGATTGCTGA
CATTATCGAGCATGAAAAAGCACGACAATGGAAGGGACTTGAACTCATTC
CTTCAGAGAACTTTACTTCAGTATCCGTGATGCAAGCTGTGGGGTCTGTC
ATGACCAACAAGTACAGTGAAGGATATCCAGGTGCAAGATATTATGGAGG
AAACGAGTATATTGACATGGCGGAATCCTTATGTCAGAAGCGAGCTCTGG
AAGCATTTCGGTTGGATCCTGAAAAATGGGGAGTGAATGTGCAGTCTCTG
TCTGGATCTCCATCTAATTTTCAAGTCTACACTGCATTGTTAAAACCTCA
TGATAGGATCATGGCACTTGATCTTCCTCATGGTGGGCATCTCTCACACG
GCTATCAGACAGATACCAAAAAGATATCTGCAGTGTCCATATTTTTTGAG
ACAATGCCATACAGATTGAATGAGAGCACTGGCTATATAGACTATGACCA
GTTGGAGAAAAGTGCCACCCTCTTCANGCCAAAATTGATGTTGCTGGTGC
TAGTGCTTATGCACGATTGTACGATTATGAGCGTATTCGCAAGTTTGCAA
CAACAAAAGCTATATGTTGGCAGATATGCACACATAAGGGTTTGGTGCTG
CTGGGCATCCCTTCACTTTGAGATGCAATGTGGGACACACAACTCCATC
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