EY755897

Overview
NameEY755897
Unique NameEY755897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13373 contig Csv1_Contig13373:2..901. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_CANFA (Natural resistance-associated macrophage protein 1 OS=Canis familiaris GN=SLC11A1 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.800e-34
Identity = 96/258 (37.21%), Postives = 153/258 (59.30%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVR-SIKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLN------PEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFHGN----LKLVEVVFLGI 767
            HN++LHSALV SR+I RS R  I+EA  +++IE+  AL+V+F IN+ V++V G             VC++S+L+      P +  +  ++D+ +   +L  V G  +  ++A+ LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P+++V +         L  + +++ S  LPFA++P+L FTS    M   AN     AIT  I +L+  IN+Y++   ++  L H      + L+ +V+LG+
Sbjct:  252 HNIYLHSALVKSREIDRSRRPDIREANMYFLIEASIALSVSFFINLFVVAVFGQAFYQQTNEAAFNVCANSSLHDYAKIFPRNNLTV-EVDIYQGGVMLGCVFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVVVFRDLKDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGRLSKAITSFIMALVCAINLYFVVI-YLPSLPHPAYFILVALLAIVYLGL 507          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_HUMAN (Natural resistance-associated macrophage protein 1 OS=Homo sapiens GN=SLC11A1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.382e-33
Identity = 95/258 (36.82%), Postives = 154/258 (59.69%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLN------PEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFH----GNLKLVEVVFLGI 767
            HN++LHSALV SR+I R+ R+ I+EA  +++IE+  AL+V+F+IN+ V++V G             +C++S+L+      P + A+   +D+ +   +L  + G  +  ++AI LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P+++VA+         L  + +++ S  LPFA++P+L FTS    M   AN +    +T  I  L+  IN+Y++  S++  L H    G   L+   +LG+
Sbjct:  255 HNIYLHSALVKSREIDRARRADIREANMYFLIEATIALSVSFIINLFVMAVFGQAFYQKTNQAAFNICANSSLHDYAKIFPMNNATVA-VDIYQGGVILGCLFGPAALYIWAIGLLAAGQSSTMTGTYAGQFVMEGFLRLRWSRFARVLLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPTLMQEFANGLLNKVVTSSIMVLVCAINLYFV-VSYLPSLPHPAYFGLAALLAAAYLGL 510          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 3.111e-33
Identity = 95/262 (36.26%), Postives = 149/262 (56.87%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVR-SIKEACRFYMIESGFALAVAFLINVSVISVSGAVCSSSNLNPEDQASCKDLDLNKASFLLRNVLGSWSSKL---FAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLII--IASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFHGNLKLVEVVFLGIFGFSAMAVYWXGVAYLVLRKI 830
            HN+FLHSALV SR++ +  +  ++EA  +Y IES  AL ++FLIN+ V +V      +++L          + L  A   L+   G     +   +AI LLA+GQSSTITGTYAGQ++M GFL+ ++K WLR  +TR  AI+P++IVAL+  S+ A   ++    +++ S ++PFAL+PLL   S +  MG          I W++ +L+++IN Y L    ++F  +    +V   F+ +F     A Y   + YL+ R I
Sbjct:  250 HNVFLHSALVQSREVDKRQKYRVQEALNYYTIESTIALFISFLINLFVTTVFAKGFYNTDL-------ANSIGLVNAGQYLQEKYGGGVFPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFDSSEATLDVLNEWLNVLQSIQIPFALIPLLCLVSKEQIMGSFKIGPLYKTIAWLVAALVIMINGYLL----LEFFSNEVSGIVYTGFVTLF----TASYGAFILYLIARGI 496          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_RAT (Natural resistance-associated macrophage protein 1 OS=Rattus norvegicus GN=Slc11a1 PE=2 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 4.063e-33
Identity = 91/269 (33.83%), Postives = 152/269 (56.51%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLN------PEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFHGNLKLVEVVFLGIFGFSAMAVYWXGVAY 812
            HN++LHSALV SR++ R+ R  ++EA  +++ E+  AL V+F+IN+ V++V G             +C++S+L+      P D  +   +D+ +   +L  + G  +  ++A+ LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P+++VA+         L  + +++ S  LPFA++P+L FTS    M   AN      IT  I +L+  IN+Y++ +            LV ++ +G  G +A   +   +A+
Sbjct:  211 HNIYLHSALVKSREVDRTRRGDVREANMYFLTEATIALFVSFIINLFVMAVFGQAFYQQTNEEAFNICANSSLHNYAKIFPRDNNTVS-VDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEFANGWLSKVITSCIMALVCAINLYFVISYLPSLPHPAYFGLVALLAIGYLGLTAYLAWTCCIAH 478          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_PIG (Natural resistance-associated macrophage protein 1 OS=Sus scrofa GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.307e-33
Identity = 95/257 (36.96%), Postives = 150/257 (58.37%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLNPEDQASCKD-----LDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFH----GNLKLVEVVFLGI 767
            HN++LHSALV SR++ R+ R  I+EA  +++IES  AL V+F IN+ V++V G             +C++S+L+   +   ++     +D  +   +L  + G  +  ++A+ LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P+L+VA+         L  + +++ S  LPFA++P+L FTS    M   A+      IT  I  L+  IN Y+L  S++  L H    G + L+ V++LG+
Sbjct:  252 HNIYLHSALVKSREVDRTRREDIREANMYFLIESTIALFVSFFINLFVMAVFGQAFYQQTNQAAFNICANSSLHDYAKIFPRNNLTVAVDFYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARLLLTRSCAILPALLVAVFKELQDLSSLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFASGRVNKVITSSIMLLVCAINFYFL-VSYLPSLPHPAYFGLVALLAVIYLGL 507          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.931e-33
Identity = 93/257 (36.19%), Postives = 151/257 (58.75%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSN-----LNPEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFHGNLKLV-EVVFLGIFGF 776
            HN++LHSALV SR++ R+ +  ++EA +++ IES  AL V+F+INV V+SV               VC +S+     L P D ++   +D+ K   +L    G  +  ++A+ +LA+GQSST+TGTY+GQ+VM+GFL+L+   + R  LTR +AI+P+L+VA+         +    +++ S +LPFAL+P+L FTS +  M   +N I       I+  L+  IN+Y++   +++ L H  L +V  VV +   GF
Sbjct:  267 HNMYLHSALVKSRQVNRANKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFEKTNEQVVEVCRNSSSPHADLFPNDNSTLA-VDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVILTRSIAIIPTLLVAVFQDVEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSEFSNGIGWRIAGGILVLLVCSINMYFVVV-YVQELGHVALYVVAAVVSVAYLGF 521          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 9.052e-33
Identity = 92/257 (35.80%), Postives = 153/257 (59.53%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSN-----LNPEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFHGNLKLV-EVVFLGIFGF 776
            HN++LHSALV SR++ R+ +  ++EA +++ IES  AL V+F+INV V+SV               VC++++     L P+D ++   +D+ K   +L    G  +  ++A+ +LA+GQSST+TGTY+GQ+VM+GFL+L+   + R  LTR +AI+P+L+VA+         +    +++ S +LPFAL+P+L FTS +  M   AN +       I+  +I  IN+Y++   +++ L H  L +V  VV +   GF
Sbjct:  267 HNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCTNTSSPHAGLFPKDNSTLA-VDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQDVEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSINMYFVVV-YVRDLGHVALYVVAAVVSVAYLGF 521          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_CEREL (Natural resistance-associated macrophage protein 1 OS=Cervus elaphus GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.182e-32
Identity = 91/258 (35.27%), Postives = 154/258 (59.69%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLN------PEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFHGN----LKLVEVVFLGI 767
            HN++LHS+LV SR++ RS R+ I+EA  +++IE+  AL+V+FLIN+ V++V G             +C++S+L+      P +  +   +D+ +   +L  + G  +  ++A+ LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P+++VA+         L  + +++ S  LPFA++P+L FTS    M   AN +    I+  I  L+  +N+Y++  S++  L H +    + L+   +LG+
Sbjct:  252 HNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQTNQAAFNICANSSLHDYATIFPRNNLTVA-VDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLVAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPAVMQEFANGLVSKVISSSIMVLVCAVNLYFV-ISYVPSLPHPDYFSLVALLAAAYLGL 507          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_BUBBU (Natural resistance-associated macrophage protein 1 OS=Bubalus bubalis GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32
Identity = 92/264 (34.85%), Postives = 153/264 (57.95%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLN------PEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFH-GNLKLVEVVFLGIFGFSAMAVY 794
            HN++LHS+LV SR++ RS R+ I+EA  +++IE+  AL+V+FLIN+ V++V G             +C+ S+L+      P +  +   +D+ +   +L  + G  +  ++A+ LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P++++A+         L  + +++ S  LPFA++P+L FTS    M   AN +    IT  I  L+  +N+Y++  S++  L H     LV ++     G +   V+
Sbjct:  252 HNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQTNQAAFNICAKSSLHDYAPIFPRNNLTVA-VDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLLAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMQEFANGLVSKVITSSIMVLVCAVNLYFV-ISYVPSLPHPAYFSLVALLAAAYLGLTTYLVW 513          
BLAST of EY755897 vs. ExPASy Swiss-Prot
Match: NRAM1_BISBI (Natural resistance-associated macrophage protein 1 OS=Bison bison GN=SLC11A1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.544e-32
Identity = 92/264 (34.85%), Postives = 153/264 (57.95%), Query Frame = 3
Query:   63 HNLFLHSALVLSRKIPRSVRS-IKEACRFYMIESGFALAVAFLINVSVISVSGA------------VCSSSNLN------PEDQASCKDLDLNKASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWLRNFLTRCLAIVPSLIVALIGGSAGAGQLIIIASMILSFELPFALVPLLKFTSSKVKMGMHANSIAITAITWIIGSLIMIINVYYLATSFIKFLFH-GNLKLVEVVFLGIFGFSAMAVY 794
            HN++LHS+LV SR++ RS R+ I+EA  +++IE+  AL+V+FLIN+ V++V G             +C++S+L       P +  +   +D+ +   +L  + G  +  ++A+ LLA+GQSST+TGTYAGQ+VM+GFL LR   + R  LTR  AI+P++++A+         L  + +++ S  LPFA++P+L FTS    M   AN +    IT  I  L+  +N+Y++  S++  L H     LV ++     G +   V+
Sbjct:  252 HNIYLHSSLVKSREVDRSRRADIREANMYFLIEATIALSVSFLINLFVMAVFGQAFYKQTNQAAFNICANSSLQDYAPIFPRNNLTVA-VDIYQGGVILGCLFGPAALYIWAVGLLAAGQSSTMTGTYAGQFVMEGFLKLRWSRFARVLLTRSCAILPTVLLAVFRDLRDLSGLNDLLNVLQSLLLPFAVLPILTFTSMPALMREFANGLVSKVITSSIMVLVCAVNLYFV-ISYVPSLPHPAYFSLVALLAAAYLGLTTYLVW 513          
The following BLAST results are available for this feature:
BLAST of EY755897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
NRAM1_CANFA4.800e-3437.21Natural resistance-associated macrophage protein 1... [more]
NRAM1_HUMAN2.382e-3336.82Natural resistance-associated macrophage protein 1... [more]
NRAM3_ARATH3.111e-3336.26Metal transporter Nramp3 OS=Arabidopsis thaliana G... [more]
NRAM1_RAT4.063e-3333.83Natural resistance-associated macrophage protein 1... [more]
NRAM1_PIG5.307e-3336.96Natural resistance-associated macrophage protein 1... [more]
NRAM2_RAT6.931e-3336.19Natural resistance-associated macrophage protein 2... [more]
NRAM2_HUMAN9.052e-3335.80Natural resistance-associated macrophage protein 2... [more]
NRAM1_CEREL1.182e-3235.27Natural resistance-associated macrophage protein 1... [more]
NRAM1_BUBBU1.544e-3234.85Natural resistance-associated macrophage protein 1... [more]
NRAM1_BISBI1.544e-3234.85Natural resistance-associated macrophage protein 1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755897 ID=EY755897; Name=EY755897; organism=Citrus sinensis; type=EST; length=900bp
CCCGCGTCCGGGTTCCCTTGCTTGGAGTTTGTCATCTTTGTTTCCATTTG
TATCTTTTCAGACACAATCTCTTTCTCCACTCAGCATTGGTGCTTTCTAG
GAAAATCCCAAGATCTGTTAGGAGCATCAAGGAAGCTTGCAGATTTTATA
TGATTGAAAGTGGCTTTGCTTTAGCAGTGGCTTTTCTCATTAATGTGTCA
GTTATTTCTGTAAGTGGTGCGGTTTGCAGTTCCTCAAACTTAAATCCGGA
AGATCAAGCTAGCTGCAAGGACTTGGACTTAAATAAAGCCTCCTTTTTAC
TTAGAAATGTCTTAGGTAGTTGGAGTTCAAAACTTTTTGCAATTGCTTTG
TTGGCATCAGGTCAGAGTTCTACTATAACTGGAACTTATGCAGGACAATA
TGTTATGCAGGGCTTTCTTGACTTACGATTGAAGCCATGGCTTCGGAACT
TTCTAACTCGATGCTTGGCAATAGTGCCTAGTCTAATTGTTGCACTGATT
GGTGGTTCTGCTGGCGCAGGACAACTCATTATTATTGCATCGATGATTCT
TTCATTTGAGCTCCCTTTTGCTCTTGTGCCACTTCTCAAGTTTACCAGCA
GCAAGGTGAAGATGGGGATGCATGCCAACTCAATTGCGATTACAGCTATT
ACATGGATCATCGGTTCCCTGATAATGATAATAAATGTATACTATCTCGC
GACAAGCTTCATCAAGTTCCTTTTTCATGGCAATTTAAAACTCGTGGAAG
TTGTTTTCTTGGGAATATTTGGGTTTTCGGCAATGGCAGTATATTGGNCT
GGAGTGGCTTACTTGGTCTTGCGAAAAATAAGAAAGCTCACACCTTTTGC
ACTAAACACACATGAAACCNACATTCAACTACGAGTCTGGCATGCATCCC
back to top