EY755895

Overview
NameEY755895
Unique NameEY755895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.406e-51
Identity = 92/208 (44.23%), Postives = 139/208 (66.83%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPERNI 675
            P   ++IQA L+L+A+G TTG+V +SG GV+ +VPI+EGY LPH + +LDLAG DLT+ LM ++   G    + ++R+IV D+KE   Y+A++YE+E+  AK    +EK Y+LPDG+VI +  + F CP  LF P  + +E+ GI +  ++S+MKCD  +       I+L GGS  FPG+  R+ K I  +AP++  ++V+APPER I
Sbjct:  129 PAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLSASDRKIVEDIKESFCYVAMNYEEEM--AKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHMNLEAPGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKVAPANTAVQVIAPPERKI 334          

HSP 2 Score: 33.8834 bits (76), Expect = 5.406e-51
Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQCGWPI*S**P--GPSLVHPKCF 785
            W+GGSILASLS FQ   W   +     GP++VH +CF
Sbjct:  337 WMGGSILASLSAFQDM-WITAAEFKEVGPNIVHQRCF 372          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACT27_DICDI (Putative actin-27 OS=Dictyostelium discoideum GN=act27 PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.197e-50
Identity = 110/215 (51.16%), Postives = 137/215 (63.72%), Query Frame = 1
Query:   28 ILNRATRPPNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQP-SMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            I+    + P   V  QA  S+Y SGR TGIV DSGD  SH VP+YEG ALPHA   L  AG DLTD +  +L + GY+     EREIVRD+KEKL+Y++ D+  E+    T+    KSYELPDGQVITI  E F CP VLF P +  G    GI +  YNS+MKC+ DI  DL G +VL+GGS +FPGI  RM K +  LAPS+ +I + A P+R
Sbjct:  112 IMFETFKTPAIYVENQAVFSIYNSGRMTGIVLDSGDSASHVVPVYEGLALPHATSSLGFAGCDLTDQMSLLLNDLGYNL----EREIVRDIKEKLSYVSSDFSWEINDPSTLG---KSYELPDGQVITIDKELFACPEVLFLPYAFFGTNLDGIDKAIYNSIMKCNDDIHNDLYGNVVLSGGSTMFPGIEYRMYKGLTQLAPSTTEIVINAEPDR 319          

HSP 2 Score: 23.8682 bits (50), Expect = 1.197e-50
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQ 725
            WIGGSIL  +  FQ+
Sbjct:  324 WIGGSILGLVPNFQE 338          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACT28_DICDI (Putative actin-28 OS=Dictyostelium discoideum GN=act28 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 2.881e-49
Identity = 111/215 (51.63%), Postives = 138/215 (64.19%), Query Frame = 1
Query:   28 ILNRATRPPNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSM-IGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            I+    + P   V  QA  S+Y SGR TGIV DSGD  SH VP+YEG ALP A   L  AG DLTD +  +L + GY+     EREIVRD+KEKL+Y++ D+  E++      ++EKSYELPDGQVITIG E   C   LF P +  G    GI +  YNS+MKCDVDI  DL G +VL+GGS +FPGI  RM K +  LAPS+ +I + APPER
Sbjct:  114 IMFETFKTPAIYVENQAVFSIYNSGRMTGIVLDSGDSASHVVPVYEGLALPLATSSLGFAGCDLTDQMSLLLNDLGYNL----EREIVRDIKEKLSYVSSDFLWEIDD----PSLEKSYELPDGQVITIGKELLACSEGLFLPYVFFGTNLDGIDKAIYNSIMKCDVDIHNDLYGNVVLSGGSTMFPGIEYRMYKELTQLAPSTTEIVINAPPER 320          

HSP 2 Score: 21.557 bits (44), Expect = 2.881e-49
Identity = 8/15 (53.33%), Postives = 10/15 (66.67%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQ 725
            WIGGSIL  +  F +
Sbjct:  325 WIGGSILGLVPNFPE 339          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACTT2_MOUSE (Actin-related protein T2 OS=Mus musculus GN=Actrt2 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.398e-48
Identity = 96/206 (46.60%), Postives = 136/206 (66.02%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            P   ++ QA L+LY+S   TG+V DSGDGV+ TVPIYEGY+LPHA+ +L +AG+D+T+ L ++L   G +F    E+ +  D+KEKL Y+AL+ E+EL  ++    V + Y+LPDG VI IG + ++ P VLF P  +G    G+ +   NS+ KCD DI K L G IVL+GGS LF G+ DR+ K +  LA   + IK+ APP+R
Sbjct:  134 PAFYLSDQAVLALYSSACVTGLVVDSGDGVTCTVPIYEGYSLPHAVSKLYVAGKDITELLTRLLLASGRAFPCPLEKALADDIKEKLCYVALEPEEEL--SRRAEDVLREYKLPDGNVIYIGDQLYQAPEVLFSPDQLGTHGPGLAQMASNSITKCDADIQKTLFGEIVLSGGSTLFQGLDDRLLKELEQLASKGVPIKITAPPDR 337          

HSP 2 Score: 25.7942 bits (55), Expect = 2.398e-48
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQ 725
            WIG SI+ SLS+F+Q
Sbjct:  342 WIGASIVTSLSSFKQ 356          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACT4_LYTPI (Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pictus PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 2.430e-48
Identity = 85/122 (69.67%), Postives = 102/122 (83.61%), Query Frame = 1
Query:  304 EKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            EKL Y+ALD+EQE++TA + S++EKSYELPDGQVIT G ERFR P  L+QPS +GMES+GIHETTYNS+M CDVDI KDL    VL+GGS +FPGIADRM K I +LAP +MKIK++APPER
Sbjct:    1 EKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITTGNERFRAPESLYQPSFLGMESSGIHETTYNSIMMCDVDIRKDLYANTVLSGGSTIFPGIADRMQKEITSLAPPTMKIKIIAPPER 122          

HSP 2 Score: 35.8094 bits (81), Expect = 2.430e-48
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 3
Query:  669 EYWAWIGGSILASLSTFQQ 725
            +Y  WIGGSILASLSTFQQ
Sbjct:  123 KYSVWIGGSILASLSTFQQ 141          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP2_CAEEL (Actin-related protein 2 OS=Caenorhabditis elegans GN=arx-2 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.757e-47
Identity = 98/213 (46.01%), Postives = 133/213 (62.44%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPAL-----------APSSMKIKVVAPPER 669
            V +QA L+LYA G  TG+V DSGDGV+H  P+YEG+AL H   RLD+AGRD+T  L+K+L +RGY+F  +A+ E VR MKEKL YIA D EQE   A   + + + Y LPDG+VI +G ERF  P +LFQP +I +E AG+ E  +  +   D+D   D    IVL+GG+ ++PG+  R+ K +  L           A    KI++ APP R
Sbjct:  138 VAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSR 350          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.603e-47
Identity = 85/208 (40.87%), Postives = 132/208 (63.46%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPERNI 675
            P   ++ QA L+L+A+G TTG+V +SG G++  VPI+EGY L H + +L++AG DLT  LM +L   G     T +R++V D+KE   Y+A++YE E+      S +EK Y LPDG+ + +  + F CP  LF P ++ +++ GI +  + S+MKCD D+       I+L+GGS  FPG+  R+ K +  LAP++  ++V+APPER I
Sbjct:  127 PAFYMSAQAVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIMLLRTGDRKVVTDIKENACYVAMNYEDEMTKD---SNLEKIYTLPDGKTVKLHKQLFHCPEALFSPYLVNVDAPGIDKMCFGSIMKCDTDLRNSFFSNIILSGGSTSFPGLDKRLIKDVAKLAPANTAVQVIAPPERKI 331          

HSP 2 Score: 33.8834 bits (76), Expect = 2.603e-47
Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQCGWPI*S**P--GPSLVHPKCF 785
            W+GGSILASLS FQ   W   +     GP++VH +CF
Sbjct:  334 WMGGSILASLSAFQDM-WITAAEFEEVGPNIVHQRCF 369          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP2_DICDI (Actin-related protein 2 OS=Dictyostelium discoideum GN=arpB PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.914e-47
Identity = 89/187 (47.59%), Postives = 131/187 (70.05%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPAL 624
            V IQA L+LYA G  TG+V DSGDGV+H +P+YEGY++PH   RLD+AGRD+T  L+K+L  RGY+F  TA+ E +R +KEKL Y+A D +QE++ A   + + ++Y LPDG+VI +G ERF+    LF PS++ +E  G+HE  ++ + K D D+ +     IVL+GGS+++PG+  R+ K I +L
Sbjct:  136 VAIQAVLTLYAQGLLTGVVVDSGDGVTHIIPVYEGYSIPHLTRRLDVAGRDVTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAYDVQQEMKLASETTVLVENYTLPDGRVIKVGQERFQASEALFNPSLVDVEGGGVHEQLFDCITKADRDLQQGFYQHIVLSGGSSMYPGLPSRLEKEIRSL 322          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP2_CAEBR (Actin-related protein 2 OS=Caenorhabditis briggsae GN=arx-2 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.139e-46
Identity = 96/213 (45.07%), Postives = 132/213 (61.97%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPAL-----------APSSMKIKVVAPPER 669
            + + A L+LYA G  TG+V DSGDGV+H  P+YEG+AL H   RLD+AGRD+T  L+K+L +RGY+F  +A+ E VR MKEKL YIA D EQE   A   + + + Y LPDG+VI +G ERF  P +LFQP +I +E AG+ E  +  +   D+D   D    IVL+GG+ ++PG+  R+ K +  L           A    KI++ APP R
Sbjct:  136 IYVAAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSR 348          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: YGEC_SCHPO (Uncharacterized actin family protein C1347.12 OS=Schizosaccharomyces pombe GN=SPBC1347.12 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.275e-46
Identity = 90/218 (41.28%), Postives = 136/218 (62.39%), Query Frame = 1
Query:   16 YQYGILNRATRPPNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            Y Y  LN     P    ++Q  L+LYAS RTTGIV + GDG++H+VPIY+G+++P AI + ++ GRD+TD L   L + G+   ++AE+EIVR++KEK  Y+A D+  E+E+         +Y+LPD Q IT+G E F  P VLF P M+G E++G+H   + S++  D+D+   L   IVL+GGS L  G  +R    + A++    ++K+ A PER
Sbjct:  127 YFYETLN----VPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEMMGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYASPER 340          

HSP 2 Score: 31.5722 bits (70), Expect = 1.275e-46
Identity = 13/16 (81.25%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  678 AWIGGSILASLSTFQQ 725
            AW+GGSILASLSTF++
Sbjct:  344 AWLGGSILASLSTFRR 359          
The following BLAST results are available for this feature:
BLAST of EY755895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 454
Match NameE-valueIdentityDescription
ARPM1_HUMAN5.406e-5144.23Actin-related protein M1 OS=Homo sapiens GN=ARPM1 ... [more]
ACT27_DICDI1.197e-5051.16Putative actin-27 OS=Dictyostelium discoideum GN=a... [more]
ACT28_DICDI2.881e-4951.63Putative actin-28 OS=Dictyostelium discoideum GN=a... [more]
ACTT2_MOUSE2.398e-4846.60Actin-related protein T2 OS=Mus musculus GN=Actrt2... [more]
ACT4_LYTPI2.430e-4869.67Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pic... [more]
ARP2_CAEEL1.757e-4746.01Actin-related protein 2 OS=Caenorhabditis elegans ... [more]
ARPM1_MOUSE2.603e-4740.87Actin-related protein M1 homolog OS=Mus musculus G... [more]
ARP2_DICDI3.914e-4747.59Actin-related protein 2 OS=Dictyostelium discoideu... [more]
ARP2_CAEBR1.139e-4645.07Actin-related protein 2 OS=Caenorhabditis briggsae... [more]
YGEC_SCHPO1.275e-4641.28Uncharacterized actin family protein C1347.12 OS=S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755895 ID=EY755895; Name=EY755895; organism=Citrus sinensis; type=EST; length=922bp
ACTGGACGCCTGAGGTACCAGTACGGAATCCTCAATAGAGCGACGCGTCC
GCCAAATACTGTCGTTAACATCCAGGCTGGTCTTTCACTCTATGCCAGTG
GTCGTACTACTGGTATTGTGCCTGACTCTGGAGATGGTGTCAGCCACACA
GTCCCAATCTATGAGGGGTATGCTCTTCCACATGCAATCTTGCGTCTTGA
CCTTGCCGGTCGTGATCTCACTGATGCCTTGATGAAAATCTTGACTGAGC
GTGGCTACTCATTTACCACCACAGCCGAACGTGAAATTGTGAGGGATATG
AAGGAGAAATTGGCATACATTGCCCTTGATTATGAACAAGAATTAGAAAC
CGCCAAGACCATCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTC
AGGTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCATAAGTCCTTTTC
CAACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTA
CAACTCCTTAATGAAATGTGATGTTGATATTATGAAGGATCTGGATGGGA
TCATTGTACTTACTGGCGGTTCCGCCTTGTTCCCTGGGATTGCTGATAGA
ATGAGCAAATAAATCCCTGCATTAGCACCTAGCAGCATGAAGATAAAGGT
GGTTGCTCCTCCCGAGAGGAATATTGGGCCTGGATAGGCGGATCCATTTT
GGCATCCCTCAGCACTTTCCAGCAATGTGGATGGCCAATCTGATCATGAT
GACCTGGGCCTTCCCTAGTGCACCCGAAATGCTTCTGATCCGGAGCCAAT
ATGGACTGGGACCTGGTGCCTTTTATATACAAATGCTGCTGGCCTTTCCT
CTTTAATACCAAATGCTGGTTGCATTTCCTTCTTTCTTTGCCTTGGGGTC
CTTATTCAACGGGGGACAAAAC
back to top