EY755895

Overview
NameEY755895
Unique NameEY755895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP1_YEAST (Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.760e-43
Identity = 86/204 (42.16%), Postives = 131/204 (64.22%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALM-KILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET-AKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            V+  A LSLYASGRTTG V D G+G   TVPIY+G+ALP +++R+D+ G D+T+ L  ++    G S  +++EREIVR MKEK+ Y+A + ++E E   +    +  +++LPDG+ I +G +R+R P +LF P +IG+   G+ +    S+ K D+D+ K L   I+L+GG+    G  DRM   + AL   + KIK++AP ER
Sbjct:  142 VSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQLRKSAGVSLFSSSEREIVRTMKEKVCYLAKNIKKEEEKYLQGTQDLISTFKLPDGRCIEVGNDRYRAPEILFSPQIIGLGYDGLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTTLKGFGDRMLWDLEALTKGTSKIKIIAPSER 345          

HSP 2 Score: 33.113 bits (74), Expect = 2.760e-43
Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  660 SREEYWAWIGGSILASLSTFQQ 725
            S  +Y  WIGGSIL  LSTFQ+
Sbjct:  343 SERKYTTWIGGSILTGLSTFQR 364          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.761e-42
Identity = 84/195 (43.08%), Postives = 121/195 (62.05%), Query Frame = 1
Query:   85 SLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            +L AS   TG+V DSGDGV+ TVP+YEGY+LPHAI +L +AGRD+T+ L ++L  +GY+F     + +V D+KEKL  ++L Y+   +T K      + Y LPDG  I +     + P VLF P  +G+   GI +   NS+M CD DI ++L   IVL+GG+ +FPG+ DR+ K +  LA     IK+ A  +R
Sbjct:  145 ALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLLAKGYTFPCILNKAVVDDIKEKLCTVSLGYK---DTEKNCQQFLRKYTLPDGNTIQMSDHLCQVPEVLFTPDHLGIHDLGISKMVCNSIMNCDTDIQENLFAEIVLSGGTTMFPGLQDRLLKELEDLAFEGTPIKITASSDR 336          

HSP 2 Score: 31.5722 bits (70), Expect = 1.761e-42
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 3
Query:  657 SSREEYWAWIGGSILASLSTFQQ 725
            SS   Y AWIGGS++ S++TF+Q
Sbjct:  333 SSDRCYSAWIGGSVMTSMTTFKQ 355          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.237e-41
Identity = 84/195 (43.08%), Postives = 120/195 (61.54%), Query Frame = 1
Query:   85 SLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            +L AS   TG+V DSGDGV+ TVPIYEGY+LP AI +L +AGRD+T+ L ++L  +GY+F     + +V D+KEKL  ++   +   ++ K        Y+LPDG  I +     + P VLF P  +G+   GI +   NS+MKCD DI ++L   IVL+GG+ LFPG+ DR+ K +  LA     IK+ A P+R
Sbjct:  145 ALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFPCILNKAVVDDIKEKLCTVSWGSK---DSEKCYQRSLSEYKLPDGNTIQMSDHLCQVPEVLFTPEHLGIHDLGISKMVCNSIMKCDTDIQENLFAEIVLSGGTTLFPGLQDRLLKELEVLAFEGTPIKITASPDR 336          

HSP 2 Score: 31.5722 bits (70), Expect = 3.237e-41
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 3
Query:  672 YWAWIGGSILASLSTFQQ 725
            Y AWIGGS++ SL+TF+Q
Sbjct:  338 YSAWIGGSVMTSLTTFKQ 355          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP2_ARATH (Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.149e-41
Identity = 80/182 (43.96%), Postives = 121/182 (66.48%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            + IQA L+LYA G  TG+V DSGDGV+H VP+ +GY+ PH   R+++AGR +T  L+ +L+ RGY+   TA+ E VR++KEKL YI+ DY++E +     + + K+Y LPDG+VI +G ERF+ P  LF P +I +E  G+ +  +  + + D+D    L   IVL+GGS ++PG+  R+ K
Sbjct:  135 IQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEK 316          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSJ (Actin-related protein 2 OS=Oryza sativa subsp. japonica GN=ARP2 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.337e-41
Identity = 78/182 (42.86%), Postives = 121/182 (66.48%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            + +QA LSLYA G  TG+V DSGDGV+H VP+ +G++ PH   R+++AGR +T  L+ +L+ RGY+   +A+ E VR++KEKL Y++ DY++E +     + + KSY LPDG+VI +G ERF+ P  LF P +I +E  G+ +  +  + + D+D    L   IVL+GGS ++PG+  R+ K
Sbjct:  135 IQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSADFETVREIKEKLCYLSYDYKREYQLGLETTILVKSYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEK 316          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP2_ORYSI (Actin-related protein 2 OS=Oryza sativa subsp. indica GN=ARP2 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 9.337e-41
Identity = 78/182 (42.86%), Postives = 121/182 (66.48%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            + +QA LSLYA G  TG+V DSGDGV+H VP+ +G++ PH   R+++AGR +T  L+ +L+ RGY+   +A+ E VR++KEKL Y++ DY++E +     + + KSY LPDG+VI +G ERF+ P  LF P +I +E  G+ +  +  + + D+D    L   IVL+GGS ++PG+  R+ K
Sbjct:  135 IQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHITSYLVDLLSRRGYAMNKSADFETVREIKEKLCYLSYDYKREYQLGLETTILVKSYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEK 316          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACTS_PLEWA (Actin, alpha skeletal muscle (Fragment) OS=Pleurodeles waltlii PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.713e-37
Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 1
Query:  415 GAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            G ERFRCP  LFQPS IGMESAGIHETTYNS+MKCD+DI KDL    V++GG+ ++PGIADRM K I ALAPS+MKIK++APPER
Sbjct:    1 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 85          

HSP 2 Score: 42.3578 bits (98), Expect = 7.713e-37
Identity = 25/41 (60.98%), Postives = 27/41 (65.85%), Query Frame = 3
Query:  669 EYWAWIGGSILASLSTFQQCGWPI*S--**PGPSLVHPKCF 785
            +Y  WIGGSILASLSTFQQ  W         GPS+VH KCF
Sbjct:   86 KYSVWIGGSILASLSTFQQM-WITKQEYDEAGPSIVHRKCF 125          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACL7A_BOVIN (Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.772e-37
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 1
Query:    1 TGRLRYQYGILNRATRPPNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPERN 672
            T R +Y   +L    + P   +  Q+ LS+Y+ GRT+G+V + G GVS+ VPIYEGY LP    RLD AG DLT  LM ++   G  FT   +  IV D+K+K  ++ALD  +E +   T   ++  Y LPDGQ I +  ERF C  + F+PS+I     G+H  T + L KCD+ + +DL G I+L GGS +  G  +R+ K + ++ P+    +V   PER+
Sbjct:  181 TNREKYAE-MLFETFKTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMCLMNTAGKHFTE-GQLGIVEDIKKKCCFVALDPIEEKKVPATEHMIQ--YTLPDGQAIYLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVSVLPERD 399          

HSP 2 Score: 25.7942 bits (55), Expect = 9.772e-37
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  681 WIGGSILASLSTFQ 722
            W GGSILASL  FQ
Sbjct:  403 WTGGSILASLQGFQ 416          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACTL9_MOUSE (Actin-like protein 9 OS=Mus musculus GN=Actl9 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 8.107e-36
Identity = 80/210 (38.10%), Postives = 126/210 (60.00%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMI-GMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRM-SK*IPALAPSSMKIKVVAPPERNI 675
            P   V  Q+ LS+YA GR  G+V D+G GVS+TVP+ +GY LPHAI RLDLAG  LT  L ++L   G+S     + ++V ++K    Y+A D+++  E A+     ++S +LPDG+ +T+G E F+CP +LF P  I G+   G+      SL+K   ++   +   ++L GGS+LF G+  R  ++ + +L+P    + V+A P RN+
Sbjct:  172 PALYVASQSVLSVYAHGRVNGLVVDTGHGVSYTVPVVQGYNLPHAIQRLDLAGNHLTAFLAEMLLGSGFSL-QQEDLDLVENIKHHYCYLAPDFQK--EQARPDEECKQSLKLPDGRTVTLGKELFQCPELLFHPPEIPGLSPIGLPAMAEQSLLKVPQELRPHVARNVILCGGSSLFTGLEGRFRAELLHSLSPED-HVVVMAHPNRNL 377          

HSP 2 Score: 34.6538 bits (78), Expect = 8.107e-36
Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQCGWPI*S**P--GPSLVHPKCF 785
            WIGGSILASL  FQ C W +       GP +V+ KC+
Sbjct:  380 WIGGSILASLHAFQSC-WVLREQYEERGPQVVYRKCY 415          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ACL7B_MOUSE (Actin-like protein 7B OS=Mus musculus GN=Actl7b PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.792e-35
Identity = 82/207 (39.61%), Postives = 118/207 (57.00%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCD-VDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPER 669
            P   V  QA LS+Y+ G+T+G+V +SG GVSH VPI EG  LP    R+D AG DLT+ LM++L E G+ F+      I+  +K+K  Y AL  E+E+     +  +   YELPDG++ITIG ERFRC  +LF+PS++G    G+ E T   L +C      +++   ++L GG  +  G  +R  + +  L P      V A PER
Sbjct:  177 PAMHVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAGHKFSDD-HLHIIEHIKKKCCYAALLPEEEMSLG--LDELHVDYELPDGKIITIGQERFRCSEMLFKPSLVGCTQPGLPELTATCLARCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSP-TVAAAPER 379          

HSP 2 Score: 28.4906 bits (62), Expect = 1.792e-35
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  681 WIGGSILASLSTFQQ 725
            W GGSILASL  FQQ
Sbjct:  384 WTGGSILASLQAFQQ 398          
The following BLAST results are available for this feature:
BLAST of EY755895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 454
Match NameE-valueIdentityDescription
ARP1_YEAST2.760e-4342.16Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=... [more]
ACTT1_MOUSE1.761e-4243.08Actin-related protein T1 OS=Mus musculus GN=Actrt1... [more]
ACTT1_RAT3.237e-4143.08Actin-related protein T1 OS=Rattus norvegicus GN=A... [more]
ARP2_ARATH7.149e-4143.96Actin-related protein 2 OS=Arabidopsis thaliana GN... [more]
ARP2_ORYSJ9.337e-4142.86Actin-related protein 2 OS=Oryza sativa subsp. jap... [more]
ARP2_ORYSI9.337e-4142.86Actin-related protein 2 OS=Oryza sativa subsp. ind... [more]
ACTS_PLEWA7.713e-3772.94Actin, alpha skeletal muscle (Fragment) OS=Pleurod... [more]
ACL7A_BOVIN9.772e-3739.29Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2... [more]
ACTL9_MOUSE8.107e-3638.10Actin-like protein 9 OS=Mus musculus GN=Actl9 PE=2... [more]
ACL7B_MOUSE1.792e-3539.61Actin-like protein 7B OS=Mus musculus GN=Actl7b PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755895 ID=EY755895; Name=EY755895; organism=Citrus sinensis; type=EST; length=922bp
ACTGGACGCCTGAGGTACCAGTACGGAATCCTCAATAGAGCGACGCGTCC
GCCAAATACTGTCGTTAACATCCAGGCTGGTCTTTCACTCTATGCCAGTG
GTCGTACTACTGGTATTGTGCCTGACTCTGGAGATGGTGTCAGCCACACA
GTCCCAATCTATGAGGGGTATGCTCTTCCACATGCAATCTTGCGTCTTGA
CCTTGCCGGTCGTGATCTCACTGATGCCTTGATGAAAATCTTGACTGAGC
GTGGCTACTCATTTACCACCACAGCCGAACGTGAAATTGTGAGGGATATG
AAGGAGAAATTGGCATACATTGCCCTTGATTATGAACAAGAATTAGAAAC
CGCCAAGACCATCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTC
AGGTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCATAAGTCCTTTTC
CAACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTA
CAACTCCTTAATGAAATGTGATGTTGATATTATGAAGGATCTGGATGGGA
TCATTGTACTTACTGGCGGTTCCGCCTTGTTCCCTGGGATTGCTGATAGA
ATGAGCAAATAAATCCCTGCATTAGCACCTAGCAGCATGAAGATAAAGGT
GGTTGCTCCTCCCGAGAGGAATATTGGGCCTGGATAGGCGGATCCATTTT
GGCATCCCTCAGCACTTTCCAGCAATGTGGATGGCCAATCTGATCATGAT
GACCTGGGCCTTCCCTAGTGCACCCGAAATGCTTCTGATCCGGAGCCAAT
ATGGACTGGGACCTGGTGCCTTTTATATACAAATGCTGCTGGCCTTTCCT
CTTTAATACCAAATGCTGGTTGCATTTCCTTCTTTCTTTGCCTTGGGGTC
CTTATTCAACGGGGGACAAAAC
back to top