EY755895

Overview
NameEY755895
Unique NameEY755895
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.450e-17
Identity = 60/209 (28.71%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  115 IVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTI---SAVEKSYELPD------------------------GQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAP 660
            I+ DSG   +H VP         AI+R+++ G+ LT+ L +I++ R        E  ++  +KE + Y++ D+ ++++ AK     + V   Y LPD                         Q++ +  ERF  P +LF PS IG++  GI E    S+     ++       IVLTGG++LFPG  DR+   +  L P+   + VV P
Sbjct:  146 IIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLPDFSTIKKGFCKPREEMVLSGKYKSGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRDRVYSEVRCLTPTDYDVSVVLP 352          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.474e-17
Identity = 57/208 (27.40%), Postives = 101/208 (48.56%), Query Frame = 1
Query:  115 IVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE---TAKTISAVEKSYELPD---------------------GQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAPPE 666
            I+ D G   +H VP   G  +   I R+D+ G+ LT+ L ++++ R        E  +V  +KE + ++A D++Q ++   + +    V   Y LPD                      Q++++  ERF  P +LF PS IG++  GI E   + L  C  +  ++L   I++ GGSA FPG   R+ + + AL P  +++ ++ P +
Sbjct:  154 IIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYR--HLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHYSEEKRREVTVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPED 359          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.220e-17
Identity = 59/209 (28.23%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  115 IVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTI---SAVEKSYELPD------------------------GQVITIGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVVAP 660
            I+ DSG   +H VP         AI+R+++ G+ LT+ L +I++ R        E  ++  +KE + Y++ D+ ++++ AK     + V   Y LPD                         Q++ +  ERF  P +LF PS IG++  GI E    S+     ++       IVLTGG++LFPG  +R+   +  L P+   + VV P
Sbjct:  146 IIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMIDYVLPDFSTIKKGFCKPREEMVLSGKYKSGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQNLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRCLTPTDYDVSVVLP 352          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP3_SCHPO (Actin-related protein 3 OS=Schizosaccharomyces pombe GN=act2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.995e-16
Identity = 63/198 (31.82%), Postives = 96/198 (48.48%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRT--------TGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY--SFTTTAEREIVRDMKEKLAYIALDYEQEL-----ETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGME-SAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            + +QA L+L AS  +        TG V DSGDGV+H +P+ EGY +  +I  + LAGRD+T  +  +L +R    S   TAER     +KE+  Y+  D  +E      E  + +    +S        I +G ERF  P + F P +   +    + E   N +    +D+ K L   IVL+GGS LF    +R+ +
Sbjct:  157 IAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFSRFDREPDRYLKYASESI-TGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQR 348          

HSP 2 Score: 20.7866 bits (42), Expect = 2.995e-16
Identity = 8/19 (42.11%), Postives = 10/19 (52.63%), Query Frame = 3
Query:  663 REEYWAWIGGSILASLSTF 719
            R+    W GGS+LA    F
Sbjct:  381 RQRNAVWFGGSLLAQTPEF 399          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP3_NEUCR (Actin-related protein 3 OS=Neurospora crassa GN=arp-3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 5.056e-16
Identity = 58/210 (27.62%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   64 VNIQAGLSLYASGRT--------TGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTISA--VEKSYELPDGQVIT--IGAERFRCP*VLFQPSMIGMESAGIHETTYNSLMKCD-VDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSSMKIKVV 654
            + +QA L+L AS  +        TG V DSGDGV+H +P+ EGY +  +I  + +AGRD+T  +  +L +RG      +  +  +++KE+  Y+  D  +E        +  ++ +   P G+ +T  +G ERF  P + F P +   +         + +++   +D+ + L   IVL+GGS L+     R+ + I  L  + +K   V
Sbjct:  166 IAVQAVLALAASWTSSKVQDRSLTGTVIDSGDGVTHVIPVAEGYVIGSSIKSIPIAGRDITYFVQSLLRDRG---EPDSSLKTAQEIKEEYCYVCPDIVKEFAKYDRDRSRFLKHTITQPGGRQVTVDVGYERFMAPEIFFNPEIYSSDFLTPLPVVVDGVIQSSPIDVRRGLYKNIVLSGGSTLYKDFGRRLQRDIKQLVDTRIKASEV 372          

HSP 2 Score: 21.1718 bits (43), Expect = 5.056e-16
Identity = 7/20 (35.00%), Postives = 11/20 (55.00%), Query Frame = 3
Query:  663 REEYWAWIGGSILASLSTFQ 722
            R+ +  W GGS+L     F+
Sbjct:  391 RQRHGPWFGGSLLGQTPEFR 410          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.443e-15
Identity = 58/240 (24.17%), Postives = 96/240 (40.00%), Query Frame = 1
Query:   73 QAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF---------------------------------------TTTAE----REIVRDMKEKLAYIALDYEQELETAKTISAVEKSYELPDGQVITIGAERFRCP*VLFQPSMIGMESA---------GIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK*IPALAPSS 636
            QA    +A+ ++T ++ D G   +   P+ +G  +   I +  LAG  L   + ++       F                                       T++ E    R ++ + KE +  +    +   + AK  S   K +E PDG     G ERFR   +LF PS     SA         G+HE  Y S++ CD ++   L   IV+TGG++L PG+++R+   +  LA  S
Sbjct:  138 QAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEFPPHYRIARKSVAIQQSGNMANGSADAVKPAVLYPPIQDLTSSYEIFQKRRVIEEWKESVLDVL---DTPFDEAKASSRNPKPFEFPDGVTHKFGQERFRISEILFNPSFSASRSAETTPPQGSVGLHELVYQSILACDSELRSPLLNNIVVTGGTSLIPGLSERLQAEVQRLATGS 374          

HSP 2 Score: 26.9498 bits (58), Expect = 1.443e-15
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  681 WIGGSILASLSTFQ 722
            W GGSILASL  FQ
Sbjct:  392 WFGGSILASLDNFQ 405          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP3_ARATH (Actin-related protein 3 OS=Arabidopsis thaliana GN=ARP3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.174e-14
Identity = 56/193 (29.02%), Postives = 91/193 (47.15%), Query Frame = 1
Query:   55 NTVVNIQAGLSLYASGRTTGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL-----ETAKTISAVEKSYELPDGQVIT--IGAERFRCP*VLFQPSMIGME-SAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            N+V+ + AG +  +    TG+V D GDG +H VP+ EGY +   I  + +AG+D+T  + +++ ERG +       ++ R +KE   Y   D  +E      E AK I    K  +   G   T  +G ERF  P V F P +   + +  +       +    +D  + L   IVL+GGS +F     R+ +
Sbjct:  156 NSVLALAAGYTT-SKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKEFNKHDKEPAKYIKQ-WKGVKPKTGAPYTCDVGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQR 346          

HSP 2 Score: 21.557 bits (44), Expect = 1.174e-14
Identity = 7/18 (38.89%), Postives = 11/18 (61.11%), Query Frame = 3
Query:  666 EEYWAWIGGSILASLSTF 719
            + +  W GGS+L+S   F
Sbjct:  382 QRFAVWFGGSVLSSTPEF 399          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP11_HUMAN (Actin-related protein 11 OS=Homo sapiens GN=ARP11 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.960e-14
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRT--------TGIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE-----LETAKTISAVEKSYELPDGQ-VITIGAERFRCP*VLFQPSMIGMES-AGIHETTYNSLMKCDVDIMKDL 543
            P   + +QA L+L AS  +        TGIV DSGDGV+H +P+ EGY +   I  + +AGRD+T  + ++L ER          E  + +KEK  YI  D  +E     ++  K I        +   + VI +G ERF  P + F P     +S   I +     +  C +D+ + L
Sbjct:    8 PGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPQKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDSMESISDVVDEVIQNCPIDVRRPL 186          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.981e-14
Identity = 56/199 (28.14%), Postives = 88/199 (44.22%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTT-----GIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL-----ETAKTISAVEKSYELPDGQVIT--IGAERFRCP*VLFQPSMIGME-SAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            P   +  Q  L+L A   TT     G+V D GDG +H VP+ +GY +  +I  + + G+D+T  + ++L ERG         ++ R +KE   Y   D  +E      E  K I       +   G   T  IG ERF  P + F P +   + +  +H      +    +D  + L   IVL+GGS +F     R+ +
Sbjct:  150 PGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFNKHDREPNKYIKH-WSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQR 347          

HSP 2 Score: 25.409 bits (54), Expect = 1.981e-14
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  666 EEYWAWIGGSILASLSTFQQ 725
            + Y  W GGS+LAS + F +
Sbjct:  383 QRYAVWFGGSVLASTAEFYE 402          
BLAST of EY755895 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.981e-14
Identity = 56/199 (28.14%), Postives = 88/199 (44.22%), Query Frame = 1
Query:   52 PNTVVNIQAGLSLYASGRTT-----GIVPDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL-----ETAKTISAVEKSYELPDGQVIT--IGAERFRCP*VLFQPSMIGME-SAGIHETTYNSLMKCDVDIMKDLDGIIVLTGGSALFPGIADRMSK 609
            P   +  Q  L+L A   TT     G+V D GDG +H VP+ +GY +  +I  + + G+D+T  + ++L ERG         ++ R +KE   Y   D  +E      E  K I       +   G   T  IG ERF  P + F P +   + +  +H      +    +D  + L   IVL+GGS +F     R+ +
Sbjct:  150 PGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSDIVKEFNKHDREPNKYIKH-WSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQR 347          

HSP 2 Score: 25.409 bits (54), Expect = 1.981e-14
Identity = 9/20 (45.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  666 EEYWAWIGGSILASLSTFQQ 725
            + Y  W GGS+LAS + F +
Sbjct:  383 QRYAVWFGGSVLASTAEFYE 402          
The following BLAST results are available for this feature:
BLAST of EY755895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 454
Match NameE-valueIdentityDescription
ARP6_HUMAN1.450e-1728.71Actin-related protein 6 OS=Homo sapiens GN=ACTR6 P... [more]
ARP6_DROME2.474e-1727.40Actin-like protein 13E OS=Drosophila melanogaster ... [more]
ARP6_MOUSE4.220e-1728.23Actin-related protein 6 OS=Mus musculus GN=Actr6 P... [more]
ARP3_SCHPO2.995e-1631.82Actin-related protein 3 OS=Schizosaccharomyces pom... [more]
ARP3_NEUCR5.056e-1627.62Actin-related protein 3 OS=Neurospora crassa GN=ar... [more]
ARP42_SCHPO1.443e-1524.17SWI/SNF and RSC complexes subunit arp42 OS=Schizos... [more]
ARP3_ARATH1.174e-1429.02Actin-related protein 3 OS=Arabidopsis thaliana GN... [more]
ARP11_HUMAN1.960e-1430.73Actin-related protein 11 OS=Homo sapiens GN=ARP11 ... [more]
ARP3_ORYSJ1.981e-1428.14Actin-related protein 3 OS=Oryza sativa subsp. jap... [more]
ARP3_ORYSI1.981e-1428.14Actin-related protein 3 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755895 ID=EY755895; Name=EY755895; organism=Citrus sinensis; type=EST; length=922bp
ACTGGACGCCTGAGGTACCAGTACGGAATCCTCAATAGAGCGACGCGTCC
GCCAAATACTGTCGTTAACATCCAGGCTGGTCTTTCACTCTATGCCAGTG
GTCGTACTACTGGTATTGTGCCTGACTCTGGAGATGGTGTCAGCCACACA
GTCCCAATCTATGAGGGGTATGCTCTTCCACATGCAATCTTGCGTCTTGA
CCTTGCCGGTCGTGATCTCACTGATGCCTTGATGAAAATCTTGACTGAGC
GTGGCTACTCATTTACCACCACAGCCGAACGTGAAATTGTGAGGGATATG
AAGGAGAAATTGGCATACATTGCCCTTGATTATGAACAAGAATTAGAAAC
CGCCAAGACCATCTCTGCTGTTGAAAAGAGCTATGAGTTACCAGATGGTC
AGGTGATCACCATTGGTGCTGAGCGTTTTAGATGCCCATAAGTCCTTTTC
CAACCATCAATGATCGGTATGGAGTCTGCTGGTATTCATGAAACAACTTA
CAACTCCTTAATGAAATGTGATGTTGATATTATGAAGGATCTGGATGGGA
TCATTGTACTTACTGGCGGTTCCGCCTTGTTCCCTGGGATTGCTGATAGA
ATGAGCAAATAAATCCCTGCATTAGCACCTAGCAGCATGAAGATAAAGGT
GGTTGCTCCTCCCGAGAGGAATATTGGGCCTGGATAGGCGGATCCATTTT
GGCATCCCTCAGCACTTTCCAGCAATGTGGATGGCCAATCTGATCATGAT
GACCTGGGCCTTCCCTAGTGCACCCGAAATGCTTCTGATCCGGAGCCAAT
ATGGACTGGGACCTGGTGCCTTTTATATACAAATGCTGCTGGCCTTTCCT
CTTTAATACCAAATGCTGGTTGCATTTCCTTCTTTCTTTGCCTTGGGGTC
CTTATTCAACGGGGGACAAAAC
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