EY755894

Overview
NameEY755894
Unique NameEY755894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5839 contig Csv1_Contig5839:201..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.333e-31
Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQGIGAGF+P  LD  +LDEVI+VSS+E++E AK LAL+EGLLVGISSG      + + KRPENAGKLI  VFPSFGERYLS+VLF+S++ E ENM
Sbjct:  220 KPGPHKIQGIGAGFIPGVLDVNLLDEVIQVSSEESIETAKLLALKEGLLVGISSGAAAAAAIRIAKRPENAGKLIVAVFPSFGERYLSTVLFESVKRETENM 321          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.877e-31
Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQGIGAGFVP  LD  +++E ++VSSDEA+E+AK LAL+EGLLVGISSG      + + +RPEN GKL  VVFPSFGERYLSSVLFQSI++E ENM
Sbjct:  217 KPGPHKIQGIGAGFVPGVLDVDLINETVQVSSDEAIEMAKALALKEGLLVGISSGAAAAAAVRLAQRPENEGKLFVVVFPSFGERYLSSVLFQSIKKEAENM 318          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.629e-29
Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQGIGAGF+P  L+  ++DEV++VSSDE++++A+ LAL+EGLLVGISSG      +++ KRPENAGKL   VFPSFGERYLS+VLF + R+E E+M
Sbjct:  217 KPGPHKIQGIGAGFIPSVLEVDLIDEVVQVSSDESIDMARLLALKEGLLVGISSGAAAAAAIKLAKRPENAGKLFVAVFPSFGERYLSTVLFDATRKEAESM 318          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.190e-29
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQGIGAGF+P  L+  ++DEV++VSSDE++++A+ LA +EGLLVGISSG      +++ KRPENAGKL   VFPSFGERYLS+VLF + R+E E+M
Sbjct:  219 KPGPHKIQGIGAGFIPNVLETNLIDEVVQVSSDESIDMARLLAREEGLLVGISSGAAAAAAIKLAKRPENAGKLFVAVFPSFGERYLSTVLFDATRKEAESM 320          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 6.190e-29
Identity = 61/102 (59.80%), Postives = 82/102 (80.39%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQGIGAGF+P  L+  ++DEV++VSSDE++++A+QLAL+EGLLVGISSG      +++ +RPENAGKL   +FPSFGERYLS+VLF + R+E E M
Sbjct:  217 KPGPHKIQGIGAGFIPSVLNVDLIDEVVQVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFVAIFPSFGERYLSTVLFDATRKEAEAM 318          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_MYCTU (Cysteine synthase A OS=Mycobacterium tuberculosis GN=cysK PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 52/93 (55.91%), Postives = 71/93 (76.34%), Query Frame = 3
Query:   36 YKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIRE 314
            + IQGIGAGFVP  LD+ ++DE+I V +++A+ +A++LA +EGLLVGISSG      ++V +RPENAGKLI VV P FGERYLS+ LF  + +
Sbjct:  218 HPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADVAD 310          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_MYCBO (Cysteine synthase A OS=Mycobacterium bovis GN=cysK PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 52/93 (55.91%), Postives = 71/93 (76.34%), Query Frame = 3
Query:   36 YKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIRE 314
            + IQGIGAGFVP  LD+ ++DE+I V +++A+ +A++LA +EGLLVGISSG      ++V +RPENAGKLI VV P FGERYLS+ LF  + +
Sbjct:  218 HPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADVAD 310          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK4_ARATH (Probable cysteine synthase, chloroplastic OS=Arabidopsis thaliana GN=At3g03630 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 3
Query:   42 IQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQ 332
            I G   G++P  LD  +LDEV +VS+ EA+E+A++LAL+EGLLVGISSG      + + KR ENAGKLI V+FPS GERY+++ LF SI  E + M+
Sbjct:  307 ISGDNPGYLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGAAAVAAVSLAKRAENAGKLITVLFPSHGERYITTALFSSINREVQEMR 403          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_SYNY3 (Cysteine synthase OS=Synechocystis sp. (strain PCC 6803) GN=cysK PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.132e-21
Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSI 308
            KP  +KIQGIGAGF+P  LD  ++DEVI V+ +EA+   ++LA +EG+L GIS+G      ++V KRP N  KLI ++ PSFGERYLS+ LFQ +
Sbjct:  217 KPGPHKIQGIGAGFIPEVLDVNLIDEVIAVTDEEAIAYGRRLAREEGILSGISTGAALAAAIKVAKRPANKDKLIVMIQPSFGERYLSTPLFQDL 311          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_MYCLE (Cysteine synthase A OS=Mycobacterium leprae GN=cysK PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.785e-21
Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 3
Query:   36 YKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSI 308
            + IQGIGAGFVP  L   ++DE++ V ++EA+++A++LA +EGLLVGIS+G      + V +RPEN GKLI VV P FGERYLS++LF  +
Sbjct:  218 HPIQGIGAGFVPSVLVLDLVDEIVTVGNEEALDLARRLAKEEGLLVGISAGAAVCAALHVARRPENTGKLIVVVLPDFGERYLSTMLFADL 308          
The following BLAST results are available for this feature:
BLAST of EY755894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CYSK_CITLA1.333e-3166.67Cysteine synthase OS=Citrullus lanatus PE=2 SV=1[more]
CYSK1_ORYSJ3.877e-3166.67Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK1_BRAJU3.629e-2960.78Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK2_BRAJU6.190e-2959.80Cysteine synthase OS=Brassica juncea PE=2 SV=1[more]
CYSK1_ARATH6.190e-2959.80Cysteine synthase OS=Arabidopsis thaliana GN=OASA1... [more]
CYSK_MYCTU2.278e-2355.91Cysteine synthase A OS=Mycobacterium tuberculosis ... [more]
CYSK_MYCBO2.278e-2355.91Cysteine synthase A OS=Mycobacterium bovis GN=cysK... [more]
CYSK4_ARATH1.250e-2153.61Probable cysteine synthase, chloroplastic OS=Arabi... [more]
CYSK_SYNY32.132e-2152.63Cysteine synthase OS=Synechocystis sp. (strain PCC... [more]
CYSK_MYCLE2.785e-2153.85Cysteine synthase A OS=Mycobacterium leprae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755894 ID=EY755894; Name=EY755894; organism=Citrus sinensis; type=EST; length=667bp
GTCGAACAGACCCACGCGTCCGAAAGCCTGTTTCCTACAAGATTCAAGGG
ATTGGAGCAGGTTTTGTTCCTAGGAATTTGGATGAGGGTGTGCTTGATGA
AGTCATTGAGGTATCTAGTGATGAAGCTGTTGAAATTGCAAAGCAGTTAG
CACTCCAGGAAGGCTTGCTGGTTGGCATATCTTCTGGGGCGGCAGCTGCT
GCAGCAATGGAGGTTGGGAAGAGACCTGAGAATGCTGGAAAGCTTATTGC
AGTTGTGTTTCCGAGCTTTGGAGAACGATACCTCTCATCCGTTCTTTTCC
AGTCAATCCGAGAAGAATGTGAGAACATGCAGCCTGTGCCGTGAAATTCA
ACTCTTCGAGATTTATTGAAAATGCAAAGCTTATTTTTCTGTCTTCCATA
GACATTGGCATACATTTTGCTTTTGTTTTAGTCAGTATCTTCTGTTTTTG
TGTACATCCACTTGTAGGATCCTAATTATAGTTATGTCCATTCATGACTG
TTAAGTCCTTTTTTAAGAAGGAAAATCCTGTTATTTGTGGAATTCATCTT
AGGGGTGGAATTTGTGATTACATTTCTCTTCTGTAATTGATGTGCTTTAG
CTTAATTTTAAAATGTTAAAGACATGGGAAGTGATTAGTGAAAAAAAAAA
AAAAAAAAAAAAAAAAA
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