EY755894

Overview
NameEY755894
Unique NameEY755894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5839 contig Csv1_Contig5839:201..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = 3 
Query:   33 SYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKR-PENAGKLIAVVFPSFGERYLSSVLF 299
            S+KIQGIGA F+P  L++ V+DEVI VS+++A+  AK+LA + GL+VGISSG        + K+ P+   K I  +     ERYLS+ LF
Sbjct:  213 SHKIQGIGANFIPAILNKEVIDEVITVSNEDAINTAKELA-KSGLMVGISSGANVFAASMLAKKFPD---KRILTMLNDTAERYLSTDLF 298
[Close]
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11
Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 3 
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSI 308
            KP ++K+ G   GF+P  L+E V DE+I++S ++A    ++LA +EG+LVG SSG      +E  KR  +  K++  +    GERYLS+ L+  I
Sbjct:  218 KPGAHKLVGTSPGFIPPILNEDVYDEIIKISDEDAYTTTRRLAAEEGILVGPSSGAACFAAIETAKR-LSPDKVVVCMTADTGERYLSTDLWSFI 311
The following BLAST results are available for this feature:
BLAST of EY755894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CYSM_CAMJE4.457e-1146.67Cysteine synthase B OS=Campylobacter jejuni GN=cys... [more]
CYSM_BACSU4.457e-1138.95Probable cysteine synthase OS=Bacillus subtilis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755894 ID=EY755894; Name=EY755894; organism=Citrus sinensis; type=EST; length=667bp
GTCGAACAGACCCACGCGTCCGAAAGCCTGTTTCCTACAAGATTCAAGGG
ATTGGAGCAGGTTTTGTTCCTAGGAATTTGGATGAGGGTGTGCTTGATGA
AGTCATTGAGGTATCTAGTGATGAAGCTGTTGAAATTGCAAAGCAGTTAG
CACTCCAGGAAGGCTTGCTGGTTGGCATATCTTCTGGGGCGGCAGCTGCT
GCAGCAATGGAGGTTGGGAAGAGACCTGAGAATGCTGGAAAGCTTATTGC
AGTTGTGTTTCCGAGCTTTGGAGAACGATACCTCTCATCCGTTCTTTTCC
AGTCAATCCGAGAAGAATGTGAGAACATGCAGCCTGTGCCGTGAAATTCA
ACTCTTCGAGATTTATTGAAAATGCAAAGCTTATTTTTCTGTCTTCCATA
GACATTGGCATACATTTTGCTTTTGTTTTAGTCAGTATCTTCTGTTTTTG
TGTACATCCACTTGTAGGATCCTAATTATAGTTATGTCCATTCATGACTG
TTAAGTCCTTTTTTAAGAAGGAAAATCCTGTTATTTGTGGAATTCATCTT
AGGGGTGGAATTTGTGATTACATTTCTCTTCTGTAATTGATGTGCTTTAG
CTTAATTTTAAAATGTTAAAGACATGGGAAGTGATTAGTGAAAAAAAAAA
AAAAAAAAAAAAAAAAA
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