EY729096

Overview
NameEY729096
Unique NameEY729096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: Y452_FRASC (UPF0678 fatty acid-binding protein-like protein Francci3_0452 OS=Frankia sp. (strain CcI3) GN=Francci3_0452 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.216e-16
Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 1
Query:   16 PISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGS-------GEPMHAESGYWR--PNPDGS--IEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNG-ELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+++L+GTWRG+G GGY  ++ F YG+E+ F  + G+P + Y   TW           G P+  E+G+WR  P  DG   +EV++A   G+ E+  GT       I L   ++   +  R+V+   R++ LV G +L Y + M       ++ HL A L ++
Sbjct:   29 PLAFLVGTWRGEGVGGYEGLDGFHYGQEITFA-ADGRPALGYVSHTWWADEPRDGREPGSPLATETGFWRVQPGEDGKPVVEVMLAHPFGIAEIYVGTVTGTR--IDLDHNVLIRTATARDVTRSVRLYGLVEGCDLAYAIDMEAEG-KPMQSHLSARLHRV 186          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: Y3970_STRGG (UPF0678 fatty acid-binding protein-like protein SGR_3970 OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=SGR_3970 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.448e-16
Identity = 47/154 (30.52%), Postives = 82/154 (53.25%), Query Frame = 1
Query:   16 PISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+++LLG W G G   +P     ++G+E+ F+H G +  + Y   TW L        P+  E+GYWR + D  +EVV+A+  G++E+  G    ++  I L ++ V   +     S   R++  V  +L +V + AT  +  LRP++ A L+K+
Sbjct:   14 PLAFLLGNWAGAGVSDFPGAEKCNFGQEVTFSHDG-RDFLEYVSHTWVLDDEGKQVRPLETETGYWRIDKDRKVEVVMARDQGVIEIWYGELADQKPQIDLVTDAVARTAASGPYSGGKRLYGYVKSDLMWVGEKATPEV-ELRPYMSAHLKKV 165          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: Y373_SALAI (UPF0678 fatty acid-binding protein-like protein Sare_0373 OS=Salinispora arenicola (strain CNS-205) GN=Sare_0373 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.100e-15
Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 1
Query:   31 LGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRP-----NPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQM-ATNHLTSLRPHLKAVL 447
            +G WRG+G GGYPTI  FDYG+E+  +H  G+P + Y  + W L        P   E G+WRP        G  E ++   TG++E+  G     +  ++  ++ V      +EV+   R+F +V G L Y  +M A  H   L PHL A L
Sbjct:   45 VGVWRGRGRGGYPTIEDFDYGQEIRISHD-GRPFLCYESRAWLLDEQSRPIRPAGREMGWWRPVLAGDRATGEWEALMTTPTGVMELHLGKRTGTQ--LEFATDAVVRTPTAKEVTAGHRLFGIVEGALLYAQEMAAVGH--GLTPHLSARL 191          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: Y1365_STRAW (UPF0678 fatty acid-binding protein-like protein SAV_1365 OS=Streptomyces avermitilis GN=SAV_1365 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.100e-15
Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = 1
Query:   16 PISYLLGTWRGQGSGGYPTINA-FDYGEELNFTHSGGKPVIAYTQKTWKLGSGE----PMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE---LVGNASKVREVSRVFELVNG-------ELRYVVQMATNHLTS 420
            P+  LLG+W G+G GGYPT+   F Y +EL F+H G +P + Y  + W L + +    P   E G+WR  PDG +E +I Q TG+ E+  G   A    I L +    L   A KV    R + L +        +L  V Q   +HL++
Sbjct:   28 PVLGLLGSWYGRGEGGYPTLTGDFGYAQELTFSHDG-RPFLRYEARAWLLDADDAPLRPSARECGWWRLQPDGRVEALITQPTGIAEIMVG--RATGNTIDLSTHEVALAPTAKKVNATRRRYTLTDDDTLTFHHDLEAVGQPMQHHLSA 174          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: THAP4_HUMAN (THAP domain-containing protein 4 OS=Homo sapiens GN=THAP4 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.200e-15
Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   16 PISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASK---VREVSRVFEL-VNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+S++LGTW     G+G YPT+  F Y EE++ +H  G+P++ ++  ++   + +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S    + +K   V +++R F L   G+L   V MAT     +  HL    +K+
Sbjct:  424 PLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHV-GQPMLNFSFNSFHPDTRKPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCIASHSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHVTYKKV 575          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: Y310_SALTO (UPF0678 fatty acid-binding protein-like protein Strop_0310 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=Strop_0310 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.459e-15
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 1
Query:   31 LGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPNPDG-----SIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQM-ATNHLTSLRPHLKAVL 447
            +G WRG+G GGYPTI  FD+ +E+  +H  G+P + Y  + W L        P   E G+WRP  DG       E +++  TG++E+  G     +  ++  ++ V      +EV+   R+F +V G L Y  +M A  H   L PHL A L
Sbjct:   45 IGVWRGRGRGGYPTIEDFDFAQEIRISHD-GRPFLCYESRAWLLDEQSRPIRPAGREMGWWRPVLDGDRATNEWEALMSTPTGVMELHLGKRTGTQ--LEFATDAVVRTPTAKEVTAGHRLFGIVEGALLYAQEMAAVGH--GLTPHLSARL 191          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: Y4030_STRAW (UPF0678 fatty acid-binding protein-like protein SAV_4030 OS=Streptomyces avermitilis GN=SAV_4030 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.216e-14
Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = 1
Query:   16 PISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVS---RVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+++LLG W G G   +P     ++G+E++FTH  G+  + Y   TW L +      P+  ESG+WR +    +E V+ +  G+VE+  G   A++  I L ++ V   +     S   R++  V  +L +V +  T  +  LRP++ A L+K+
Sbjct:   14 PLAFLLGNWAGAGVHDFPGSEKCNFGQEVSFTHD-GRDFLEYHSHTWVLDADGNKVRPLETESGFWRVDAARKVEAVMTRDDGVVEIWYGELAAKKPQIDLVTDAVARTAAAGPYSGGKRLYGYVKSDLMWVGEKQTPEV-ELRPYMSAHLKKV 165          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: THAP4_BOVIN (THAP domain-containing protein 4 OS=Bos taurus GN=THAP4 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.216e-14
Identity = 53/154 (34.42%), Postives = 84/154 (54.55%), Query Frame = 1
Query:   16 PISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASK---VREVSRVFEL-VNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+S++LGTW  +  G+G +PT+  F Y EE + +H G +P++ ++   +   + +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S    + +K   V +++R F L   G L   V MAT     L  HL    +K+
Sbjct:  431 PLSWMLGTWLSEPPGAGTFPTLQPFRYLEEAHISHVG-QPMLNFSFNAFHPDTHKPMHRECGFIRLEPDTNKVAFVSAQNTGIVEVEEGEVNGQELCIASHSIARISFAKEPHVEQITRKFRLNSEGNLEQTVSMATT-TQPLTQHLHVTYKKV 582          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: THAP4_RAT (THAP domain-containing protein 4 OS=Rattus norvegicus GN=Thap4 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.074e-14
Identity = 51/154 (33.12%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   16 PISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASK---VREVSRVFEL-VNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+S++LGTW  +  G G +PT+  F Y EE++ +H G +P++ ++  ++   + +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  +   S    + +K   V++++R F L   G+L   V MAT     +  HL    +K+
Sbjct:  416 PLSWMLGTWLSEPPGVGTFPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPETHKPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCVSSHSISRISFAKEPHVQQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKKV 567          
BLAST of EY729096 vs. ExPASy Swiss-Prot
Match: THAP4_MOUSE (THAP domain-containing protein 4 OS=Mus musculus GN=Thap4 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14
Identity = 51/154 (33.12%), Postives = 85/154 (55.19%), Query Frame = 1
Query:   16 PISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASK---VREVSRVFEL-VNGELRYVVQMATNHLTSLRPHLKAVLRKL 456
            P+S++LGTW     G G +PT+  F Y EE++ +H G +P++ ++  ++   + +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  +   S    + +K   V +++R F L   G+L   V MAT     +  HL    +K+
Sbjct:  416 PLSWMLGTWLSDPPGVGTFPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPETHKPMHRECGFIRLKPDTNKVAFVSAQNTGIVEVEEGEVNGQELCVSSHSVSRISFAKEPHVEQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKKV 567          
The following BLAST results are available for this feature:
BLAST of EY729096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
Y452_FRASC2.216e-1632.10UPF0678 fatty acid-binding protein-like protein Fr... [more]
Y3970_STRGG6.448e-1630.52UPF0678 fatty acid-binding protein-like protein SG... [more]
Y373_SALAI1.100e-1534.21UPF0678 fatty acid-binding protein-like protein Sa... [more]
Y1365_STRAW1.100e-1534.67UPF0678 fatty acid-binding protein-like protein SA... [more]
THAP4_HUMAN3.200e-1534.42THAP domain-containing protein 4 OS=Homo sapiens G... [more]
Y310_SALTO5.459e-1533.55UPF0678 fatty acid-binding protein-like protein St... [more]
Y4030_STRAW1.216e-1429.87UPF0678 fatty acid-binding protein-like protein SA... [more]
THAP4_BOVIN1.216e-1434.42THAP domain-containing protein 4 OS=Bos taurus GN=... [more]
THAP4_RAT2.074e-1433.12THAP domain-containing protein 4 OS=Rattus norvegi... [more]
THAP4_MOUSE2.709e-1433.12THAP domain-containing protein 4 OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-E03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729096 ID=EY729096; Name=EY729096; organism=Citrus sinensis; type=EST; length=599bp
CCACGCGTCCGAGCACCAATATCCTACTTGCTGGGAACATGGAGAGGCCA
AGGCTCGGGTGGGTACCCTACCATCAATGCCTTCGATTATGGAGAAGAGC
TCAATTTCACACATTCTGGTGGCAAGCCAGTGATAGCATATACCCAGAAG
ACTTGGAAACTGGGTTCAGGAGAGCCTATGCATGCTGAGAGTGGCTACTG
GAGGCCCAACCCTGATGGTTCCATTGAAGTTGTCATTGCTCAAAGCACTG
GCCTTGTTGAAGTTCAGAAAGGAACATATAATGCAGAAGAGAAAGTAATC
AAGCTTCAGAGTGAACTTGTGGGAAATGCTTCCAAGGTGCGAGAGGTAAG
CAGAGTTTTTGAGCTGGTTAATGGTGAACTGCGTTATGTGGTTCAAATGG
CTACCAACCACCTGACTAGTCTTCGTCCACATCTGAAAGCCGTGCTCAGG
AAACTATGATTGTACAATCACTATGTTATTTCTCTTGATATACTGGCAAA
GCGCTCTATGAATGAGCATCTGTTGTAGTGGTACTGACTTGTTGGGGAAG
GGTTTGGTTTCATAATAATAAAAAACTGCTCTCANNAAAAAAAAAAAAA
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