EY729059
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_METS5 (3-isopropylmalate dehydratase large subunit OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=leuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.218e-13 Identity = 51/145 (35.17%), Postives = 74/145 (51.03%), Query Frame = 1 Query: 367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 TLTEKI +RAS K +SPGD + DI+ HD+ G + +K K++D+ KIV+ DH D R+ +R F E + F+DI G+ H L ++ + PG+V++ DSHT T+GA G FA Sbjct: 4 TLTEKILSRASGKT-VSPGDVIEAKTDIVAFHDLTGYHVIEVMEK--ANMMKIFDKTKIVVAFDHLAPPPDVRSAEIQGNIRKFVKEMRLPNFHDIN-----------VGILHELLIEQ-YALPGQVIVAADSHTTTSGAVGAFA 133
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_GEOBB (3-isopropylmalate dehydratase large subunit OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=leuC PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.170e-13 Identity = 51/147 (34.69%), Postives = 75/147 (51.02%), Query Frame = 1 Query: 364 MTLTEKIF-ARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 MT +KIF A ++P G V +++D++M H++ P + + +V+D KI + DH + D + +LRD+ +IK F+DI AN GVCH +KG RPG ++ DSHTCT GAFG FA Sbjct: 3 MTTAQKIFSAHLVDEP--FAGTKV-LSIDVVMCHEITTPIAIADLMARGKD--RVFDPTKIKAVIDHVTPSKDSKTATQAKMLRDWARRHDIKDFFDIG------AN----GVCHALFPEKGFIRPGNTVIMGDSHTCTHGAFGAFA 134
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_GEOMG (3-isopropylmalate dehydratase large subunit OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=leuC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.364e-13 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 1 Query: 367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 T EKIFA S G V + +D++M H++ P + + +V+D KI + DH + D + +LRD+ IK F+D+ + GVCH +KG+ RPG ++ DSHTCT GAFG FA Sbjct: 4 TTAEKIFASHLVDEPFS-GTKV-LRLDVVMCHEITTPIAIADLMARGKD--RVFDPTKIKAVIDHVTPSKDSKTATQAKMLRDWARRHAIKDFFDV----------GHNGVCHALFPEKGYIRPGYTVIMGDSHTCTHGAFGAFA 134
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC1_METMA (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina mazei GN=leuC1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.223e-12 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 439 NVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 +VD M HD + FK+ E +VWD +IVI DH + E + +R++ EQ+I FY+I + G+CH L + G PG++L+G DSH+CT GAFG FA Sbjct: 4 DVDYAMAHDGTSILAVNAFKEM--EMERVWDPSRIVIPFDHIAPANTETSATLQKEIREWVREQSIPNFYEIGE-----------GICHQVLPENGFALPGKLLVGADSHSCTYGAFGAFA 111
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_PICTO (3-isopropylmalate dehydratase large subunit OS=Picrophilus torridus GN=leuC PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12 Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGA 786 T EKIF+ S + GD V N+D +M +D+ GP + F E G ++IV+IPDH++ D + ++DF ++ N +FYD+ GVCH + +KG PG ++ G DSHT T GA Sbjct: 3 TAVEKIFSDKSGNDARA-GDYVIANLDYVMVNDITGPIAIDAFN-ELGYKPL---SDRIVVIPDHFVPPKDINSAIQYKKVKDFALKHNT-HFYDL----------GRGGVCHQVMMEKGFAAPGRLIAGADSHTNTYGA 126
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: HACA_METJA (Homoaconitase large subunit OS=Methanocaldococcus jannaschii GN=hacA PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.766e-11 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 1 Query: 364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 MTL EKI ++ ++ GD++ V VD+ MTHD P ++ K+ + VW+ +KIV+ DH + + +A + +F IK F+ +G+CH LA+ + P + G DSHTCT GAFG FA Sbjct: 1 MTLVEKILSKKVGY-EVCAGDSIEVEVDLAMTHDGTTPLAYKALKEM---SDSVWNPDKIVVAFDHNVPPNTVKAAEMQKLALEFVKRFGIKNFHK-----------GGEGICHQILAEN-YVLPNMFVAGGDSHTCTHGAFGAFA 130
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_GEOSL (3-isopropylmalate dehydratase large subunit OS=Geobacter sulfurreducens GN=leuC PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.306e-11 Identity = 48/145 (33.10%), Postives = 70/145 (48.28%), Query Frame = 1 Query: 367 TLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 T+ EKIFA + G V + +D++M H++ P + + +V+D KI + DH + D + +LRD+ I F+D+ AN GVCH +KG RPG ++ DSHTCT GAFG FA Sbjct: 4 TIAEKIFASHLVDEPFA-GTKV-LRLDVVMCHEITTPIAIADLMARGKD--RVFDPTKIKAVIDHVTPSKDSKTATQAKMLRDWARRHGIVDFFDVG------AN----GVCHALFPEKGFIRPGYTVIMGDSHTCTHGAFGAFA 134
BLAST of EY729059 vs. ExPASy Swiss-Prot
Match: LEUC_MYCS2 (3-isopropylmalate dehydratase large subunit OS=Mycobacterium smegmatis GN=leuC PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.934e-11 Identity = 45/146 (30.82%), Postives = 67/146 (45.89%), Query Frame = 1 Query: 364 MTLTEKIFARASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGYFKANPDYKGVCHIALAQKGHCRPGEVLLGTDSHTCTAGAFGPFA 801 MT+ EKI AR + ++ G+ V V VD+ + D+ F + + + D K+ I+ DH + + R F + I+ FYD+ G+CH +A+ G RPGE+L TDSHTC GAF A Sbjct: 3 MTIIEKILARKAGVAEVHAGEIVTVEVDMTVLIDLQ-------FATMWMQPLMINDASKVAIVMDHAVPAPTIKDAAGGPNARKFANDYGIERFYDV----------GRHGICHQVIAENGLARPGEILACTDSHTCAGGAFNTAA 131 The following BLAST results are available for this feature:
BLAST of EY729059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729059 ID=EY729059; Name=EY729059; organism=Citrus sinensis; type=EST; length=838bpback to top |