EY729057

Overview
NameEY729057
Unique NameEY729057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_DROYA (Translationally-controlled tumor protein homolog OS=Drosophila yakuba GN=Tctp PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 54/154 (35.06%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYQE 501
            M +Y+D++TGDE+ +D++  K  +  +++EV GK + +   D+ + GAN S                 VD+V   RLQE  AF DKK +  Y+K ++K +  KL E   ++ ++FK N+  A K +L +  +LQFF GESM  DG +    Y+E
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDE-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLQECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDVFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYRE 151          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_DROME (Translationally-controlled tumor protein homolog OS=Drosophila melanogaster GN=Tctp PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 54/154 (35.06%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAF-DKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYQE 501
            M +Y+D++TGDE+ +D++  K  ++ +++EV GK + +   D+ + GAN S                 VD+V   RL E  AF DKK +  Y+K ++K +  KL E   ++ +IFK N+  A K +L +  +LQFF GESM  DG +    Y+E
Sbjct:    1 MKIYKDIITGDEMFADTYKMKLVDD-VIYEVYGKLITRQGDDIKLEGANASAEEADEGTDITSESG--VDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYRE 151          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_XENTR (Translationally-controlled tumor protein homolog OS=Xenopus tropicalis GN=tpt1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADAL 546
            M++Y+D +T DE+ SD +   ET +G+ +EVEGK +  V+GA+D  +    +                 VDIV   +LQE   F K  +  Y+K ++KL+  KL E   +R + F K I+   K +L    + QF+ GE M+ DG +    Y+E    P +   F D L
Sbjct:    1 MIIYKDTVTEDEMFSDIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASAECQEEDIGGATTVSGVDIVINHKLQE-TGFTKDSYKNYIKDYVKLVKAKLEETDPDRVKPFMKGIQDRVKLILGNFKNYQFYTGERMNPDGMVALLDYREDGVTPFMI-FFKDGL 167          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_RAT (Translationally-controlled tumor protein OS=Rattus norvegicus GN=Tpt1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 56/170 (32.94%), Postives = 89/170 (52.35%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DEL SD +  +E  +G+  EVEGK V   +GA+D  +    +                 VDIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+  ++ QFF+GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQE-TSFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMI-FFKDGLE 168          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_MOUSE (Translationally-controlled tumor protein OS=Mus musculus GN=Tpt1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.177e-16
Identity = 56/170 (32.94%), Postives = 89/170 (52.35%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWV--VQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DEL SD +  +E  +G+  EVEGK V   +GA+D  +    +                 VDIV    LQE  +F K+ +  Y+K ++K L  KL E++ E  K  + GA    K +L+  ++ QFF+GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEGPEGEGTESTVVTGVDIVMNHHLQE-TSFTKEAYKKYIKDYMKSLKGKLEEQKPERVKPFMTGAAEQIKHILANFNNYQFFIGENMNPDGMVALLDYREDGVTPFMI-FFKDGLE 168          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_BOVIN (Translationally-controlled tumor protein OS=Bos taurus GN=TPT1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMI-FFKDGLE 168          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_PIG (Translationally-controlled tumor protein OS=Sus scrofa GN=TPT1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMI-FFKDGLE 168          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_PANTR (Translationally-controlled tumor protein OS=Pan troglodytes GN=TPT1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMI-FFKDGLE 168          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_HUMAN (Translationally-controlled tumor protein OS=Homo sapiens GN=TPT1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.207e-15
Identity = 57/171 (33.33%), Postives = 89/171 (52.05%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DE+ SD +  +E  +G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QFF+GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMI-FFKDGLE 168          
BLAST of EY729057 vs. ExPASy Swiss-Prot
Match: TCTP_RABIT (Translationally-controlled tumor protein OS=Oryctolagus cuniculus GN=TPT1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.588e-15
Identity = 56/171 (32.75%), Postives = 88/171 (51.46%), Query Frame = 1
Query:   55 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVD---IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKKNIEGAT---KFLLSKLSDLQFFVGESMHDDGCLVFAYYQEGADXPNIFGIFADALK 549
            M++Y+DL++ DE+ SD +  +E   G+  EVEGK V +   ++D   IG N S                 VDIV    LQE  +F K+ +  Y+K ++K +  KL E+R E  K  + GA    K +L+   + QF++GE+M+ DG +    Y+E    P +   F D L+
Sbjct:    1 MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITG-VDIVMNHHLQE-TSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFKNYQFYIGENMNPDGMVALLDYREDGVTPFMI-FFKDGLE 168          
The following BLAST results are available for this feature:
BLAST of EY729057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
TCTP_DROYA8.362e-1735.06Translationally-controlled tumor protein homolog O... [more]
TCTP_DROME2.433e-1635.06Translationally-controlled tumor protein homolog O... [more]
TCTP_XENTR3.177e-1632.54Translationally-controlled tumor protein homolog O... [more]
TCTP_RAT3.177e-1632.94Translationally-controlled tumor protein OS=Rattus... [more]
TCTP_MOUSE3.177e-1632.94Translationally-controlled tumor protein OS=Mus mu... [more]
TCTP_BOVIN9.245e-1633.33Translationally-controlled tumor protein OS=Bos ta... [more]
TCTP_PIG1.207e-1533.33Translationally-controlled tumor protein OS=Sus sc... [more]
TCTP_PANTR1.207e-1533.33Translationally-controlled tumor protein OS=Pan tr... [more]
TCTP_HUMAN1.207e-1533.33Translationally-controlled tumor protein OS=Homo s... [more]
TCTP_RABIT4.588e-1532.75Translationally-controlled tumor protein OS=Orycto... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-A06-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729057 ID=EY729057; Name=EY729057; organism=Citrus sinensis; type=EST; length=629bp
CACGCGTCCGGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACTGC
AATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTCCG
ACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTGAG
GGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAATCC
TTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGTGA
AGGTGGTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTTTT
GACAAGAAGCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTGAC
GCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATTGAGG
GAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTTTGTT
GGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACCAAGA
AGGTGCGGACGANCCCAACATTTTTGGTATATTTGCTGATGCCTTGAAAG
GAAGGGAAATTGCTTAACCCGGGCTTCCAAAAAAGAAGGTGCCTGGCGGT
AGTTTCCAATTTTTAAATTAATGGGCCCC
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