EY728998

Overview
NameEY728998
Unique NameEY728998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACCZ (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659
            + EL L   L++S+  + F+E TPIQ   IP A  QGKD+IG A+TG+GKT AFGLP++ ++   +E                     ++ ++I PTRELA+QV + L  + K   VR++PI GG    +Q R LK  P ++VGTPGR+ + ++   +  + L  +   VLDEAD M+  G   ++++I+  +P T+
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACCR (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659
            + EL L   L++S+  + F+E TPIQ   IP A  QGKD+IG A+TG+GKT AFGLP++ ++   +E                     ++ ++I PTRELA+QV + L  + K   VR++PI GG    +Q R LK  P ++VGTPGR+ + ++   +  + L  +   VLDEAD M+  G   ++++I+  +P T+
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACC1 (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659
            + EL L   L++S+  + F+E TPIQ   IP A  QGKD+IG A+TG+GKT AFGLP++ ++   +E                     ++ ++I PTRELA+QV + L  + K   VR++PI GG    +Q R LK  P ++VGTPGR+ + ++   +  + L  +   VLDEAD M+  G   ++++I+  +P T+
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACAN (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659
            + EL L   L++S+  + F+E TPIQ   IP A  QGKD+IG A+TG+GKT AFGLP++ ++   +E                     ++ ++I PTRELA+QV + L  + K   VR++PI GG    +Q R LK  P ++VGTPGR+ + ++   +  + L  +   VLDEAD M+  G   ++++I+  +P T+
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACAH (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29
Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659
            + EL L   L++S+  + F+E TPIQ   IP A  QGKD+IG A+TG+GKT AFGLP++ ++   +E                     ++ ++I PTRELA+QV + L  + K   VR++PI GG    +Q R LK  P ++VGTPGR+ + ++   +  + L  +   VLDEAD M+  G   ++++I+  +P T+
Sbjct:    4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2316_STAA8 (Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02316 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650
            + EL +    ++S+  + FKEPTPIQK  IP A  QG D++G A+TG+GKT AFG+P++                     EK   K  +++LI+ PTRELA+QV + L+  ++G  V+VV + GGM  E+Q + LK  P++VVGTPGR+ + ++        +HTL   +LDEAD M+  G   +++ I+D +P
Sbjct:    4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2168_STAAR (Probable DEAD-box ATP-dependent RNA helicase SAR2168 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2168 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650
            + EL +    ++S+  + FKEPTPIQK  IP A  QG D++G A+TG+GKT AFG+P++                     EK   K  +++LI+ PTRELA+QV + L+  ++G  V+VV + GGM  E+Q + LK  P++VVGTPGR+ + ++        +HTL   +LDEAD M+  G   +++ I+D +P
Sbjct:    4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2081_STAAM (Probable DEAD-box ATP-dependent RNA helicase SAV2081 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2081 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650
            + EL +    ++S+  + FKEPTPIQK  IP A  QG D++G A+TG+GKT AFG+P++                     EK   K  +++LI+ PTRELA+QV + L+  ++G  V+VV + GGM  E+Q + LK  P++VVGTPGR+ + ++        +HTL   +LDEAD M+  G   +++ I+D +P
Sbjct:    4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2072_STAAC (Probable DEAD-box ATP-dependent RNA helicase SACOL2072 OS=Staphylococcus aureus (strain COL) GN=SACOL2072 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650
            + EL +    ++S+  + FKEPTPIQK  IP A  QG D++G A+TG+GKT AFG+P++                     EK   K  +++LI+ PTRELA+QV + L+  ++G  V+VV + GGM  E+Q + LK  P++VVGTPGR+ + ++        +HTL   +LDEAD M+  G   +++ I+D +P
Sbjct:    4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172          
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2037_STAA3 (Probable DEAD-box ATP-dependent RNA helicase SAUSA300_2037 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2037 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29
Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3
Query:   69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650
            + EL +    ++S+  + FKEPTPIQK  IP A  QG D++G A+TG+GKT AFG+P++                     EK   K  +++LI+ PTRELA+QV + L+  ++G  V+VV + GGM  E+Q + LK  P++VVGTPGR+ + ++        +HTL   +LDEAD M+  G   +++ I+D +P
Sbjct:    4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172          
The following BLAST results are available for this feature:
BLAST of EY728998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSHA_BACCZ5.331e-2936.55DEAD-box ATP-dependent RNA helicase cshA OS=Bacill... [more]
CSHA_BACCR5.331e-2936.55DEAD-box ATP-dependent RNA helicase cshA OS=Bacill... [more]
CSHA_BACC15.331e-2936.55DEAD-box ATP-dependent RNA helicase cshA OS=Bacill... [more]
CSHA_BACAN5.331e-2936.55DEAD-box ATP-dependent RNA helicase cshA OS=Bacill... [more]
CSHA_BACAH5.331e-2936.55DEAD-box ATP-dependent RNA helicase cshA OS=Bacill... [more]
Y2316_STAA86.963e-2938.66Probable DEAD-box ATP-dependent RNA helicase SAOUH... [more]
Y2168_STAAR6.963e-2938.66Probable DEAD-box ATP-dependent RNA helicase SAR21... [more]
Y2081_STAAM6.963e-2938.66Probable DEAD-box ATP-dependent RNA helicase SAV20... [more]
Y2072_STAAC6.963e-2938.66Probable DEAD-box ATP-dependent RNA helicase SACOL... [more]
Y2037_STAA36.963e-2938.66Probable DEAD-box ATP-dependent RNA helicase SAUSA... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-C08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728998 ID=EY728998; Name=EY728998; organism=Citrus sinensis; type=EST; length=828bp
CACGCGTCCGAGATGATGCTGAAGAAGAGTTAGTCAATGAAGCTGAAATT
TCAACAGAATTTGATGCATGGAATGAATTAAGGCTTCATCCTCTGCTTAT
GAAATCAATTTACAGGCTTCAGTTCAAGGAACCAACCCCAATTCAGAAAG
CATGTATTCCTGCTGCAGCTCATCAAGGGAAGGATGTAATTGGTGCGGCT
GAGACAGGGTCTGGTAAAACGCTTGCTTTTGGTTTGCCCATTATGCAACG
TCTATTAGAAGAACGAGAAAAAGCTGCAAAGATGCTGGAAGACAAAGGGG
AGGAAGCAGAAAAATATGCTCCAAAAGGGCATTTGAGAGCTCTTATCATT
ACCCCTACGAGGGAACTTGCACTTCAGGTCACTGATCACTTAAAGGGAGT
TGCTAAGGGTATCAATGTTAGGGTGGTTCCTATTGTTGGTGGAATGTCAA
CAGAGAAGCAGGAAAGACTTTTAAAAGCAAGGCCTGAGGTGGTTGTTGGA
ACTCCCGGGAGGTTGTGGGAACTTATGTCAGGAGGAGAAAAACATCTTGT
TGAGTTACATACACTGTCGTTCTTTGTGCTGGATGAGGCTGATCGAATGA
TTGAAAATGGACATTTTCGAGAGTTGCAGTCAATAATTGACATGCTTCCT
ATGACCAATGGCTCCTATAANGGGCAGTCTGAACAAACACAAAATTGTGT
TACAGTTTCCAGCTTGCAGAGAAAGAAAAGACAACACTTGTATTTTCTGC
AACTATAGCCTTATCAGCTGATTTCGTAAGAAGCTAAGCATGGTCGCTAA
ATCGAAGCATCGGTTAATGGAATTAATC
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