EY728998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACCZ (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ZK / E33L) GN=cshA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659 + EL L L++S+ + F+E TPIQ IP A QGKD+IG A+TG+GKT AFGLP++ ++ +E ++ ++I PTRELA+QV + L + K VR++PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+ G ++++I+ +P T+ Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACCR (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cshA PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659 + EL L L++S+ + F+E TPIQ IP A QGKD+IG A+TG+GKT AFGLP++ ++ +E ++ ++I PTRELA+QV + L + K VR++PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+ G ++++I+ +P T+ Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACC1 (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus cereus (strain ATCC 10987) GN=cshA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659 + EL L L++S+ + F+E TPIQ IP A QGKD+IG A+TG+GKT AFGLP++ ++ +E ++ ++I PTRELA+QV + L + K VR++PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+ G ++++I+ +P T+ Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACAN (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus anthracis GN=cshA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659 + EL L L++S+ + F+E TPIQ IP A QGKD+IG A+TG+GKT AFGLP++ ++ +E ++ ++I PTRELA+QV + L + K VR++PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+ G ++++I+ +P T+ Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: CSHA_BACAH (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus thuringiensis (strain Al Hakam) GN=cshA PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.331e-29 Identity = 72/197 (36.55%), Postives = 113/197 (57.36%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLPMTN 659 + EL L L++S+ + F+E TPIQ IP A QGKD+IG A+TG+GKT AFGLP++ ++ +E ++ ++I PTRELA+QV + L + K VR++PI GG +Q R LK P ++VGTPGR+ + ++ + + L + VLDEAD M+ G ++++I+ +P T+ Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL-QGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKES--------------------VQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHIN---RKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH 176
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2316_STAA8 (Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02316 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650 + EL + ++S+ + FKEPTPIQK IP A QG D++G A+TG+GKT AFG+P++ EK K +++LI+ PTRELA+QV + L+ ++G V+VV + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2168_STAAR (Probable DEAD-box ATP-dependent RNA helicase SAR2168 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2168 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650 + EL + ++S+ + FKEPTPIQK IP A QG D++G A+TG+GKT AFG+P++ EK K +++LI+ PTRELA+QV + L+ ++G V+VV + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2081_STAAM (Probable DEAD-box ATP-dependent RNA helicase SAV2081 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2081 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650 + EL + ++S+ + FKEPTPIQK IP A QG D++G A+TG+GKT AFG+P++ EK K +++LI+ PTRELA+QV + L+ ++G V+VV + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2072_STAAC (Probable DEAD-box ATP-dependent RNA helicase SACOL2072 OS=Staphylococcus aureus (strain COL) GN=SACOL2072 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650 + EL + ++S+ + FKEPTPIQK IP A QG D++G A+TG+GKT AFG+P++ EK K +++LI+ PTRELA+QV + L+ ++G V+VV + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172
BLAST of EY728998 vs. ExPASy Swiss-Prot
Match: Y2037_STAA3 (Probable DEAD-box ATP-dependent RNA helicase SAUSA300_2037 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2037 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.963e-29 Identity = 75/194 (38.66%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 69 WNELRLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLEEREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVGGMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFRELQSIIDMLP 650 + EL + ++S+ + FKEPTPIQK IP A QG D++G A+TG+GKT AFG+P++ EK K +++LI+ PTRELA+QV + L+ ++G V+VV + GGM E+Q + LK P++VVGTPGR+ + ++ +HTL +LDEAD M+ G +++ I+D +P Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL-QGIDILGQAQTGTGKTGAFGIPLI---------------------EKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTL---ILDEADEMMNMGFIDDMRFIMDKIP 172 The following BLAST results are available for this feature:
BLAST of EY728998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728998 ID=EY728998; Name=EY728998; organism=Citrus sinensis; type=EST; length=828bpback to top |