EY728978

Overview
NameEY728978
Unique NameEY728978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPG (Vitamin B12-binding protein OS=Yersinia pestis bv. Antiqua (strain Angola) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPE (Vitamin B12-binding protein OS=Yersinia pestis GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPB (Vitamin B12-binding protein OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERPA (Vitamin B12-binding protein OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_YERP3 (Vitamin B12-binding protein OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=btuF PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = -2
Query:   25 MLVACAQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 306
            +L   AQAA   RV++L  S TE+ Y  G GD+LV     S YPE+A +L  V  ++ + VE +LALKPDL+LA     P   L +L  +G+ +
Sbjct:   20 LLTLPAQAAE--RVISLSPSTTELAYAAGLGDKLVAVSAYSDYPESAKKLEHVASWQGINVERILALKPDLILAWRGGNPQRPLDQLAALGIPI 111          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: YVRC_BACSU (Uncharacterized ABC transporter substrate-binding lipoprotein yvrC OS=Bacillus subtilis GN=yvrC PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = -2
Query:    1 PARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLA--SEQAGPPEALKRLGEVGVKVVSVPDAPS 276
            P ++V+L  S TEI Y LG GD++VG   +  YP+   ++ +VG    V VE V++LKPDLVLA  S  +   +A+K+L + G+ V++V DA S
Sbjct:   57 PKKIVSLMPSNTEITYALGLGDKVVGVTTNDTYPKEVKKVEKVGDMN-VNVEKVISLKPDLVLAHESSMSASADAIKQLKDAGITVLTVNDAQS 149          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_VIBCM (Vitamin B12-binding protein OS=Vibrio cholerae serotype O1 (strain M66-2) GN=btuF PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = -2
Query:   25 AQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 291
            A+  P  R+++L    TEI Y  G GD+LV   + S YP  A  L RV  ++ + +E +L LKPDL++A     PP  L +L ++G  +
Sbjct:   20 AKPFPAERIISLAPHATEIAYAAGLGDKLVAVSEYSDYPPQALELERVANHQTINIEKILTLKPDLIIAWPAGNPPRELAKLRQLGFTI 108          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_VIBCH (Vitamin B12-binding protein OS=Vibrio cholerae GN=btuF PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = -2
Query:   25 AQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 291
            A+  P  R+++L    TEI Y  G GD+LV   + S YP  A  L RV  ++ + +E +L LKPDL++A     PP  L +L ++G  +
Sbjct:   20 AKPFPAERIISLAPHATEIAYAAGLGDKLVAVSEYSDYPPQALELERVANHQTINIEKILTLKPDLIIAWPAGNPPRELAKLRQLGFTI 108          
BLAST of EY728978 vs. ExPASy Swiss-Prot
Match: BTUF_VIBC3 (Vitamin B12-binding protein OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=btuF PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = -2
Query:   25 AQAAPPARVVTLGGSVTEIVYGLGQGDRLVGDDQSSLYPEAATRLPRVGYYRAVPVEGVLALKPDLVLASEQAGPPEALKRLGEVGVKV 291
            A+  P  R+++L    TEI Y  G GD+LV   + S YP  A  L RV  ++ + +E +L LKPDL++A     PP  L +L ++G  +
Sbjct:   20 AKPFPAERIISLAPHATEIAYAAGLGDKLVAVSEYSDYPPQALELERVANHQTINIEKILTLKPDLIIAWPAGNPPRELAKLRQLGFTI 108          
The following BLAST results are available for this feature:
BLAST of EY728978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
BTUF_YERPG1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pestis bv.... [more]
BTUF_YERPE1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pestis GN=... [more]
BTUF_YERPB1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pseudotube... [more]
BTUF_YERPA1.984e-1141.49Vitamin B12-binding protein OS=Yersinia pestis bv.... [more]
BTUF_YERP31.984e-1141.49Vitamin B12-binding protein OS=Yersinia pseudotube... [more]
YVRC_BACSU4.419e-1142.55Uncharacterized ABC transporter substrate-binding ... [more]
BTUF_VIBCM7.538e-1137.08Vitamin B12-binding protein OS=Vibrio cholerae ser... [more]
BTUF_VIBCH7.538e-1137.08Vitamin B12-binding protein OS=Vibrio cholerae GN=... [more]
BTUF_VIBC37.538e-1137.08Vitamin B12-binding protein OS=Vibrio cholerae ser... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-011-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728978 ID=EY728978; Name=EY728978; organism=Citrus sinensis; type=EST; length=904bp
CGACGGCGCGTCCGGCACGCTCACGACCTTCACGCCGACTTCGCCCAGGC
GCTTGAGCGCCTCGGGCGGGCCGGCCTGCTCGGACGCCAGCACCAGGTCG
GGCTTGAGCGCCAGCACGCCCTCCACCGGCACCGCGCGGTAATAGCCGAC
GCGCGGCAGCCTGGTCGCGGCTTCCGGGTACAGGCTGGACTGGTCGTCGC
CCACCAGCCTGTCGCCCTGCCCCAGGCCGTACACGATCTCCGTCACGCTA
CCGCCCAGGGTCACCACGCGCGCAGGCGGCGCCGCCTGCGCGCAAGCCAC
CAGCATCCATCCCGCCGCCATCGCCAGCCATTTCTTCATTGCTTCATCCT
CACGCGGCCAACGGCACGCGGCACAGACCCAACATCAATTCGCGCCAGCC
CCGCAGTTCCGGCTTGCCCGGCTTGCGCTCGCCAAAGAACTGCGCGATCA
GGTCGCCGCTGGAAGAATACAGCTCCAGCGACGTCACCCAGCCATCGCTG
GTGGGCTTGTTGACCACCCACGCCGACGCGATGGCGGTGGTGTCCAGATG
CAGGTTGAACTTCGGGTCCAGCACGTTATACCAGGGACCGGTGCGGCGCA
GCTGCTCCACGGGTCCGGTATGGATCTGGATCATGCCCCGGTTGCCGACG
AAGCACATGATCGACAGGCCGCTGCCCGCGGACGACTCCAGCATGCGCTC
GACCGATTCCACCGGCACGGTCTGGGCCAGGTCCTCGCCGGCCGCCTCGA
GCGCCGGCAGGCGCCACCCTTTAACTTGCGCAGCAGCGGGAAGGACTTGT
GGCGTGTTCTGAATGCCGAACCAGGCCTGGCGCCGCTGCGCCGCGTCCTC
GACCCCCGGCGCGTCGGAGGGGGGCCATATGTCGGCGTCTTGGGCCTGAG
GACT
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