EY728962

Overview
NameEY728962
Unique NameEY728962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.087e-14
Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   35 GLITKERK-NLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 364
            GLI   RK +L     P+A +     GL      LEVV+ +KP VL+G SGV   F +EV++AM  S + KP I A+SNPT  +ECTA +A+       +FASGSPF+ V+
Sbjct:  376 GLIVSSRKESLQHFKKPWAHEHEPVKGL------LEVVKAIKPIVLIGTSGVGKTFTKEVIEAMA-SFNEKPLILALSNPTSQSECTAQEAYTWTKGKAIFASGSPFDPVE 479          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_MOUSE (NADP-dependent malic enzyme OS=Mus musculus GN=Me1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.256e-14
Identity = 48/129 (37.21%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL----GIFPCILNISFRFP 409
            GLI K R +L      FA +  +   L        +V+K+KP  L+G++ + G F E++LK M   +  +P IFA+S+PT  AEC+A + +K      +FASGSPF+ V L     +FP   N S+ FP
Sbjct:  338 GLIVKGRASLTEEKEVFAHEHEEMKNLEA------IVQKIKPTALIGVAAIGGAFTEQILKDMAAFNE-RPIIFALSSPTSKAECSADECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFP 459          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.209e-13
Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL----GIFPCILNISFRFP 409
            GLI K R +L      FA +  +   L        +V+++KP  L+G++ + G F+E++LK M   +  +P IFA+SNPT  AEC+A   +K      +FASGSPF+ V L     ++P   N S+ FP
Sbjct:  338 GLIVKGRASLTQEKEKFAHEHEEMKNLEA------IVQEIKPTALIGVAAIGGAFSEQILKDMAAFNE-RPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFP 459          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.062e-13
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 2
Query:   35 GLITKERK-NLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 364
            GLI   RK +L     P+A +           +LL+ V+ +KP VL+G SGV   F +EV++AM  S + +P IF++SNPT ++ECTA +A+  +    VFASGSPF+ V+
Sbjct:  424 GLIVNSRKESLQAFKKPWAHEHEPV------TTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMA-SFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVE 527          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 364
            GL+ K R +L P+   F +       +  G +  E+++K+KP  LLGLS    +FN+E+L  +  S   KP IF +SNPT  +ECTA +A +    N++FASGSPF+ V+
Sbjct:  372 GLLGKGRDDLLPSQQVFMRKE-----IEGGKTPAELLKKIKPTCLLGLSTCPKLFNKEMLSYVA-SYCEKPGIFPLSNPTSRSECTAEEAVEFTDGNLIFASGSPFDPVE 475          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.836e-13
Identity = 48/131 (36.64%), Postives = 66/131 (50.38%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMG---LREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENV---DLGIFPCILNISFRFP 409
            G++     NL P     A+D  D        E  SLL+VV   KP +L+G+SG  G+F+EE++KAM  S   +P +F +SNPT   E T  D         + A+GSPFE V   D+       N S+ FP
Sbjct:  336 GMLQSNMPNLLPFQQKLAQDCDDITNWDNFSENISLLDVVNNAKPTILIGVSGAPGLFSEEIIKAM-HSHCERPIVFPLSNPTSRVEATPKDILHWTKGQALVATGSPFEPVVVDDITYEIAQCNNSYIFP 465          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 2
Query:   35 GLITKERK-NLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL 367
            GL+ K R  ++D    P+A    + +     A+  + V K+KP V++G++G   +F   V+KAM  S + +P IFA+SNPT  AECTA DA+       +FASGSPFE V L
Sbjct:  348 GLLVKGRTASIDSNQEPYAHAAPESIP----ATFEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMA-SINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKL 454          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 2
Query:   35 GLITKERK-NLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVD 364
            GLI   RK +L P   P+A +           +L + V+ +KP VL+G SGV   F +E+++AM  S + +P IF++SNPT ++ECTA  A+  +    +FASGSPF  V+
Sbjct:  421 GLIVDSRKGSLQPFKKPWAHEHEPLK------TLYDAVQSIKPTVLIGTSGVGRTFTKEIIEAM-SSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFASGSPFAPVE 524          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12
Identity = 47/129 (36.43%), Postives = 68/129 (52.71%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMGLREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDL----GIFPCILNISFRFP 409
            GLI K R  L      FA +  +   L        +V+ +KP  L+G++ + G F+E++LK M   +  +P IFA+SNPT  AECTA   +       +FASGSPF+ V L     ++P   N S+ FP
Sbjct:  324 GLIVKGRAALTNEKEEFAHEHEEMKNLEA------IVQDIKPTALIGVAAIGGAFSEQILKDMAAFNE-RPIIFALSNPTSKAECTAERGYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFP 445          
BLAST of EY728962 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12
Identity = 51/133 (38.35%), Postives = 66/133 (49.62%), Query Frame = 2
Query:   35 GLITKERKNLDPAAAPFAKDPGDFMG---LREGASLLEVVRKVKPHVLLGLSGVCGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAECTAADAFKHAGENIVFASGSPFENVDLG-----IFPCILNISFRFP 409
            GL+     NL P     A+   +        +  SLL+VV   KP VL+G+SGV G+F EE+++AM  S   +P IF MSNPT   E T  D         + A+GSPFE V +      I  C  N SF FP
Sbjct:  336 GLLLDNMPNLLPFQQKLAQKCANIQNWNNFSDNISLLDVVNNAKPTVLIGVSGVPGLFTEEIIRAM-HSHCARPIIFPMSNPTSRVEATPKDILHWTSGQALVATGSPFEPVVVDGETYEIAQC--NNSFIFP 465          
The following BLAST results are available for this feature:
BLAST of EY728962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
MAOX_POPTR7.087e-1444.14NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOX_MOUSE9.256e-1437.21NADP-dependent malic enzyme OS=Mus musculus GN=Me1... [more]
MAOX_HUMAN1.209e-1336.43NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOC_ORYSJ2.062e-1341.44NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOH_NEOFR4.594e-1340.00Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_SHEPW7.836e-1336.64NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAOM_MOUSE1.337e-1241.07NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOC_MAIZE1.337e-1239.64NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_PIG1.746e-1236.43NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAO1_SHESW1.746e-1238.35NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-G12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728962 ID=EY728962; Name=EY728962; organism=Citrus sinensis; type=EST; length=890bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTCTCATCACGAAAG
AAAGGAAGAATCTTGACCCAGCGGCAGCACCTTTTGCTAAAGATCCAGGA
GATTTTATGGGGCTTAGGGAGGGAGCTAGTCTACTTGAGGTGGTTAGAAA
GGTCAAACCCCATGTGCTTCTTGGTTTGTCTGGCGTATGTGGTGTCTTCA
ATGAAGAGGTGCTTAAGGCTATGCGAGAGTCTGATTCTGTCAAACCTGCC
ATTTTTGCTATGTCAAATCCGACCATGAATGCTGAATGCACTGCTGCTGA
TGCTTTTAAGCATGCTGGGGAAAATATAGTGTTTGCTAGTGGAAGTCCTT
TTGAGAATGTTGATCTGGGTATCTTCCCTTGTATATTGAATATCTCATTT
AGATTCCCCCTGCCCGGAGTTTTAAAAACTTCCCTCACTTATAGCTATAG
AGTATATTCAAAGCCAAACAAAGACAGAACAATCAGAGAAATACAGTTTC
AGGCATGTATCATGTGAGGCATTCCAACACACCAGGCCTCTGCTACATTA
TTAAATAAGTTTCTAATCCAAAAAGCCTAATTTATATTGTTGGAACCCAA
NTAAAATATTTGAGCTCCCACTGGCACCATGCTAATAAAGTAAGAGTGCT
GCTTCTTCCCTCTTTGTCTGATTATCTGATTATTANTTGTTTCTCTGGCA
GGAAATGGGAAAATAGGCTATGTAAATCAACCAAATACATGTATCTGTTC
CCTGGGATTGGGTTGGGGACTCTCCTTTCAAGTGCTCGTTTATAACAGAT
GGGATGTTAAACAAGCTGGAGAATGCTTGCGTCCTATAGACCGATGAAGA
AATCCCAAAGGCTTCTGTTCCTCTATGACCGTTTTCAAAA
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