EY728960

Overview
NameEY728960
Unique NameEY728960
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 307
            I  Y  VP N+E  L+ A++   V V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:  203 ITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 304          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16
Identity = 51/111 (45.95%), Postives = 63/111 (56.76%), Query Frame = 2
Query:   29 YEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCGTS-LDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            + D+P   EKAL KAVA   P+SVA++    + Q Y SGI+    C +  LDHGV  VGYG E    N   YW+VKNSWG  WG  GYI+    +A      CG+A  ASY
Sbjct:  225 FVDIP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIK----IAKDRNNHCGLATAASY 330          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 2
Query:   35 DVPLNDEKALQKAVAN-QPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            ++ L  E  L+ AVA  +PVSVA E     F+ Y+SG++    CG +   ++H V AVGYG ENG  YW++KNSWG+ WGE GY +ME          CG+A  ASY
Sbjct:  252 NITLGAEYELKYAVALVRPVSVAFEVV-KGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMG-----KNMCGVATCASY 352          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 307
            I  Y  V  N+E  L+ A++   V V+I+   + FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WGE GYI M  E N  G  T
Sbjct:  203 IKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGVAT 304          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 307
            I  Y  VP N+E  L+ A++   + V+I+     FQLY+SG +T  +C  +   L+H V AVGYG  +G + WIV+NSWG+SWG+ GYI M  E N  G  T
Sbjct:  198 ITGYTKVPRNNEAELKAALSQGLLDVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTSWGDKGYINMVIEGNTCGVAT 299          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.401e-15
Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQPVSVAIEGGGMAFQLYESGIFTG-RCGTS---LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRM--ERNVAGTLT 307
            I  Y  VP N+E  L+ A++   V V+I+     FQLY+SG ++  +C  +   L+H V AVGYG  +G + WIV+NSWG+ WG+ GYI M  E N  G  T
Sbjct:  196 ITGYNKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYSDTKCKNNFFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVAT 297          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.401e-15
Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIFTGRCGTS----LDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            I  Y +V    E ALQ A+A   PV++AI+     F+ Y SG++      +    LDH V A+GYGT  G DY++VKNSW ++WG  GY+ M RN        CG++ +A+Y
Sbjct:  418 ITGYVNVTSGSESALQNAIATTGPVAIAIDASVDDFRYYMSGVYNNPACKNGLDDLDHEVLAIGYGTYQGQDYFLVKNSWSTNWGMDGYVYMARND----NNLCGVSSQATY 525          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 2
Query:   20 IDDYEDVPLNDEKALQKAVANQ-PVSVAIEGGGMAFQLYESGIF-TGRCG-TSLDHGVTAVGYGTE----NGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            + D+  +P   E+AL KAVA   P+SVA++    +FQ Y+SGI+   +C    L+H V  VGYG E    +G  YW+VKNSWG  WG  GYI+    +A      CGIA  A+Y
Sbjct:  222 VRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIK----IAKDWNNHCGIATLATY 330          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 81.2629 bits (199), Expect = 5.323e-15
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 2
Query:   17 YIDDYEDVPLNDEKALQKAVA-NQPVSVAIEGGGMAFQLYESGIFTG----RCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            ++ D  ++ + DE+A+ +AVA   PVS A E     F +Y +GI++     +    ++H V AVGYG +NG  YWIVKNSWG  WG  GY  +ER         CG+A  ASY
Sbjct:  224 FVKDVANITIYDEEAMVEAVALYNPVSFAFEVT-QDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERG-----KNMCGLAACASY 330          
BLAST of EY728960 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15
Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = 2
Query:   53 EKALQKAVAN-QPVSVAIEGGGMAFQLYESGIF--TGRCGTSLDHGVTAVGYGTENGADYWIVKNSWGSSWGEAGYIRMERNVAGTLTGKCGIAMEASY 340
            E +L++AV    P+S  + G  M  + Y  GIF  +   G +L HGV  VGYG ENG  YWI+KN+WG+ WGE+GYIR+ R+        CG+   ASY
Sbjct:  228 ETSLKEAVGTIGPISAVVFGKPM--KSYGGGIFDDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDT----DHSCGVEKMASY 320          
The following BLAST results are available for this feature:
BLAST of EY728960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
CPP2_ENTHI6.287e-1644.12Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATL1_RAT6.287e-1645.95Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP3_SOLLC1.072e-1544.86Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CPP1_ENTHI1.072e-1544.12Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
ACP2_ENTHI1.072e-1544.12Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CPP3_ENTHI1.401e-1543.14Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]
CFAD_DICDI1.401e-1540.18Counting factor associated protein D OS=Dictyostel... [more]
TEST2_MOUSE5.323e-1542.98Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATH_HUMAN5.323e-1540.71Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATLL_PHACE9.079e-1544.44Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-G10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728960 ID=EY728960; Name=EY728960; organism=Citrus sinensis; type=EST; length=680bp
CACGCGTCCGAGTAGTTACATTGATGACTATGAAGATGTTCCCCTAAATG
ACGAGAAAGCTTTGCAAAAGGCAGTTGCAAATCAACCCGTGAGTGTTGCC
ATTGAAGGAGGTGGCATGGCATTCCAGTTATATGAATCGGGTATATTTAC
GGGAAGATGTGGGACATCTCTGGACCATGGTGTTACTGCTGTTGGATATG
GCACAGAAAATGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGT
AGCTGGGGAGAGGCTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCAC
TCTCACGGGCAAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGA
AAGGCCAAAATCCTCCCAACCCTGGACCGTCCCCTCCATCTCCAACAAAG
CCTCCTGCTGTGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTG
CTGCTGTGTCTTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCC
CGCTTGAGGCTGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCCATG
ACTANCCATCTGTAATGTCGTGCTGGGACTGCTTGATGAGCATGACAACC
ATTGGGAGTGAGGCTNAGACGCCCCTGCTAACTTACGGCTCTGATCAGTG
ATCTCTATTGCTACGGCGGAATCCCATTTG
back to top