EY728929
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_CENSY (Probable exosome complex exonuclease 1 OS=Cenarchaeum symbiosum GN=CENSYa_1536 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.141e-18 Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 G+R A + AA++AL DAGIPMRD+V++C+AG + T +LD+N ED AG D+ VG +P LD+VTL+Q+D L + + +AI+GCK V ++ L Sbjct: 135 GSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEEDQAGQADMPVGYMPNLDQVTLIQLDGVLTPDEYSRCAAMAIDGCKQVYEVQKKAL 234
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_METTH (Probable exosome complex exonuclease 1 OS=Methanobacterium thermoautotrophicum GN=MTH_683 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.229e-18 Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 GTR A I AA++AL DAGIPMRD+V +C+AG + +LDL+ ED G DV V ILP ++TLLQ D L FE + LA+EGC + +E L Sbjct: 135 GTRCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTREITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEAL 234
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_METKA (Probable exosome complex exonuclease 1 OS=Methanopyrus kandleri GN=MK0381 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.004e-16 Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLE 545 GTR A I+AA++AL DAGI MRD+V +C+AG + +LD Y ED G DV + ++P K+TLLQMD + F+ ++LA +GCK V R L E Sbjct: 133 GTRCAGISAASVALADAGIEMRDLVAACAAGKVEGKVVLDPMYYEDGYGEADVPLAMMPKEGKITLLQMDGDMTPGEFKQAVKLAKKGCKIVYKEQRRALKE 234
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_THEVO (Probable exosome complex exonuclease 1 OS=Thermoplasma volcanium GN=TV0310 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.696e-15 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLENTK 554 GTR A + AAT+AL DAGIPMRD+V C+AG ++ +LDL+ ED+ G D+ + I+P ++ LLQMD + + F + + IE K ++ R LL K Sbjct: 136 GTRIAGLTAATVALADAGIPMRDMVVGCTAGKVDGHIVLDLSKEEDNFGEADIPMAIMPKTGEIVLLQMDGDVTEDEFYEATSMIIEATKKISQIQRNALLNKYK 240
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_THEAC (Probable exosome complex exonuclease 1 OS=Thermoplasma acidophilum GN=Ta1293 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.779e-15 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLENTK 554 GTR A + AAT+AL DAG+PMRD+V C+AG ++ +LDL+ ED+ G D+ + I+P + L+QMD + + M + E K ++ RE LL K Sbjct: 136 GTRIAGLTAATVALADAGVPMRDMVVGCTAGKVDGHMVLDLSKEEDNYGEADIPIAIMPKTGDIVLMQMDGDVTEDELYQAMDMIFEATKRISQIQREALLNKYK 240
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_PYRCJ (Probable exosome complex exonuclease 1 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_0933 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.419e-15 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 243 TRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 TR A + AA+LAL DAGI MRD+V S G ++ T +LDLN +ED+ G D+ VG +P L + TLLQ+D F + + LA++G + V RE L Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDNYGEGDMPVGYMPNLRRFTLLQLDGAWTREKFLEALGLAVKGAEYVYQVAREAL 232
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_HYPBU (Probable exosome complex exonuclease 1 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0571 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.100e-14 Identity = 42/112 (37.50%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVLLENTKQLECRRG 575 GTR+A I AA+LAL DAGI MRD+V + G ++ +LD++ +ED+ D+ V + P+LDKV LLQ++ L + F ++LA +G + + N +E L + ++ G Sbjct: 143 GTRTAAITAASLALADAGIAMRDLVAGVAVGKVDGVLVLDIDEIEDNYAEADMPVAMAPSLDKVLLLQLNGVLTHDEFVKALELARKGIQVIYNLQKEALRKKYVEVSVEEG 254
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_SULSO (Probable exosome complex exonuclease 1 OS=Sulfolobus solfataricus GN=SSO0735 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14 Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = 3 Query: 240 GTRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 G+R + AA+LAL DAGIPMRD++ + G + +LDLN ED G D+ + ++P+L++VTL Q++ + + F LA++G + N RE L Sbjct: 137 GSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGSMTPDEFRQAFDLAVKGINIIYNLEREAL 236
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_PYRAE (Probable exosome complex exonuclease 1 OS=Pyrobaculum aerophilum GN=PAE2207 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 243 TRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 TR A + AA+LAL DAGI MRD+V S G ++ T +LDLN +ED G D+ +G +P L + TLLQ+D + F + LA+ G + V R+ L Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDQYGEGDLPLGYMPNLKRFTLLQLDGAWTRDMFLQALNLAVRGAEYVYQIARDAL 232
BLAST of EY728929 vs. ExPASy Swiss-Prot
Match: ECX1_PYRIL (Probable exosome complex exonuclease 1 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0836 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.457e-14 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 243 TRSACINAATLALQDAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDAKLPTNTFEDVMQLAIEGCKAVANYIREVL 539 TR A + AA+LAL DAG+ MRD+V S G ++ +LDLN +ED G D+ VG +P L + TLLQ+D + F + + LAI+G + V R+ L Sbjct: 134 TRVASLTAASLALADAGVYMRDLVIGVSVGLVDGAVVLDLNGLEDQYGEGDLPVGYMPNLKRFTLLQLDGAWTRDKFLEALNLAIKGAEFVYQKARDAL 232 The following BLAST results are available for this feature:
BLAST of EY728929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728929 ID=EY728929; Name=EY728929; organism=Citrus sinensis; type=EST; length=895bpback to top |