EY728906

Overview
NameEY728906
Unique NameEY728906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 303.138 bits (775), Expect = 1.340e-81
Identity = 144/226 (63.72%), Postives = 168/226 (74.34%), Query Frame = 2
Query:   83 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-KWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            GGW   HATFY              YGNL+SQGYG  TAALSTALFN+G  CGACF++ C +DP+WC+ GSIIV+ATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C++ GGIRFTING+ YF+LVLITNVGGAGD+RAVS+KGS+T +WQ MSRNWG    SN+YL GQSLSF VT S G +VVSY+V P  W FGQT+ G QF
Sbjct:   30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 3.898e-81
Identity = 142/226 (62.83%), Postives = 161/226 (71.24%), Query Frame = 2
Query:   80 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            YG W +AHATFY              YGNLYS GYGTNTAALST LFN+G +CG+C+++ C ND QWCL GS+ VTATN CPP        GGWC+PP  HFD+++P F  I  YRAGIVPV YRRV C + GGIRFTINGHSYFNLVL+TNV G GDV++VSIKGS T WQPMSRNWG    SNSYL+GQSLSF V  S G +V S NV P  W FGQT+ G QF
Sbjct:   26 YGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.526e-80
Identity = 146/256 (57.03%), Postives = 173/256 (67.58%), Query Frame = 2
Query:   17 KMALWVILCVGFL-----SLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFDI 739
            ++ LW+ +   FL     + +  V   G W NAHATFY              YGNLYSQGYG NTAALSTALFNNG SCGACF+I C +DP+WC+ G  SI+VTATNFCPP        GGWC+PP  HFDL+ P+F  I  YRAGIVPV YRRV C++ GGIRFT+NG  YFNLVL+TNV GAGD+  VS+KGS+T W  MSRNWG    SN+ L GQSLSF VT S   S  S+NVAP  W FGQT++G+ F +
Sbjct:    7 RVGLWLAVTASFLLTATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFRV 262          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 5.628e-80
Identity = 146/232 (62.93%), Postives = 168/232 (72.41%), Query Frame = 2
Query:   77 GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC---ANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-KWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFD 736
            G GGW +AHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF++ C         CL GS++VTATNFCPP        GGWC+PP  HFD+SQPVFQ IA ++AGIVPV YRRV C++ GGIRFTINGHSYFNLVL+TNVGGAGDV AV++K  R+  WQ +SRNWG    S + L+GQ+LSF VTT  G SVVS N  P  WSFGQT++G QF+
Sbjct:   60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFRVTTGDGRSVVSNNAVPRGWSFGQTFSGAQFN 291          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.223e-79
Identity = 138/229 (60.26%), Postives = 163/229 (71.18%), Query Frame = 2
Query:   83 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFDI 739
            G W  AHATFY              YGNLYSQGYGTNTAALST+LFN+G SCGACF+I C NDP+WC  G  S+ VTATNFCPP        GGWC+PP  HFDL+ PVF  IA+YRAGIVP+ YRRV C+++GGIRFTINGH YFNLVLITNV GAGD+   S+KGS+T W  ++RNWG    SN+ L GQSLSF VT+S   +  S+N+AP  W FGQT+ G+ F +
Sbjct:   32 GSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV 260          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 8.985e-78
Identity = 138/236 (58.47%), Postives = 163/236 (69.07%), Query Frame = 2
Query:   62 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFDI 739
            +  V   GGW  AHATFY              YGNLYSQGYG NTAALSTALFNNG SCGACF++ CA+DP+WC  GS  I +TATNFCPP        GGWC+PP  HFDL+ P+F  IA+YRAGIVPV +RRV C++ GGIRFTING  YFNLVL+TNV GAG++  + +KG+ T W  MSRNWG    SNS L GQSLSF VT+S   S  S+N+AP  W FGQT+ G+ F +
Sbjct:   22 IPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV 257          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.874e-75
Identity = 138/238 (57.98%), Postives = 161/238 (67.65%), Query Frame = 2
Query:   62 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDP--QWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQFDI 739
            +    G G W +AHATFY              YGNLYSQGYG N AALSTALFN+G SCGACF+I C N P  +WC  GS  I++TATNFCPP        GGWC+PP  HFDL+ P+F HIA+YRAGIVPV YRRV C++ GG+RFTING  YFNLVLITNV GAGD+   S+KG+ T W PMSRNWG    SNS L GQ+LSF VT S   +  S+N AP  W FGQT+ G+ F +
Sbjct:   27 IPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.214e-74
Identity = 138/246 (56.10%), Postives = 164/246 (66.67%), Query Frame = 2
Query:   20 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            + L  +  V  ++   +  G  GW +  ATFY              YGNLYS GYGT+TAALSTALFNNG SCGACF++ C      CL G++ VTATN CPP        GGWC+PP  HFD+++P F  IAQ RAG+VPV YRRV C + GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+ WQ MS NWG    + + L+GQ LSF VT S G +V S NVAP  WSFGQT++G QF
Sbjct:    4 LRLLAVAAVAAMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTASDGRTVTSDNVAPSGWSFGQTFSGGQF 248          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 3.533e-74
Identity = 141/259 (54.44%), Postives = 178/259 (68.73%), Query Frame = 2
Query:   20 MALWVILCVGFLSLVSSVQ----GYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQW-CLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT------KWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            MA  ++L +  L LV++ +    G G W   HATFY              YGNLYSQGYGT+TAALSTALFN GLSCG+C+++ CA D +  CL G  ++ VTATNFCPP        GGWC+PP  HFDL++P F  IA++ AGIVPV +RRV C R GG+RFT+NGH+YFNLVL+TNVGGAGDVR++++KGS +      +WQPMSRNWG    SN+YL+G++LSF VT   G S+   +VAP  W FGQT+ GRQF
Sbjct:    1 MAPPLLLLLASLLLVAARRALGLGLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFRVTAGDGRSLTCADVAPAGWQFGQTFEGRQF 259          
BLAST of EY728906 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.754e-73
Identity = 141/261 (54.02%), Postives = 171/261 (65.52%), Query Frame = 2
Query:    8 PEKKMALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN----DPQWCLRG----SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIK---GSRTKWQPMSRNWGPKLASNSYLNGQSLSFVVTTSYGHSVVSYNVAPPKWSFGQTYTGRQF 733
            P     L V+L +      SS    G W +AHATFY              YGN Y QGYGT+TAALS  +F +GLSCGACF++ C      D + CL      SI+VTAT+ CP         GGWC+PP HHFDLSQP F  IA++++GIVPV YRRV C+R GG+RFTINGHSYFNLVL++NVGGAGDV AV++K   G + +WQ M+RNWG    S + L+GQ+LSF VTT    SVVSYNVAP  W+FGQT+TGRQF
Sbjct:    3 PPSLPILLVLLSLSSSLSSSSAAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNWQSGALLDGQALSFTVTTGDRRSVVSYNVAPAGWAFGQTFTGRQF 263          
The following BLAST results are available for this feature:
BLAST of EY728906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
EXPA2_ARATH1.340e-8163.72Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA2_ORYSJ3.898e-8162.83Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ARATH2.526e-8057.03Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA5_ORYSJ5.628e-8062.93Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP16_ARATH6.223e-7960.26Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=... [more]
EXPA6_ARATH8.985e-7858.47Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA7_ORYSJ1.874e-7557.98Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP11_ORYSJ1.214e-7456.10Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA6_ORYSJ3.533e-7454.44Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP21_ORYSJ1.754e-7354.02Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-010-B08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728906 ID=EY728906; Name=EY728906; organism=Citrus sinensis; type=EST; length=883bp
CACGCGTCCGGAAAAAAAAATGGCTCTTTGGGTGATTCTTTGTGTTGGGT
TTCTCTCATTGGTCTCATCCGTTCAAGGTTATGGAGGTTGGATTAATGCT
CATGCAACTTTCTATGGAGGTGGTGATGCTTCTGGCACAATGGGGGGCGC
TTGTGGGTACGGCAATTTGTACAGCCAAGGTTATGGTACTAATACCGCAG
CACTTAGCACTGCTTTGTTCAACAATGGCCTAAGTTGTGGAGCTTGCTTT
CAAATTATGTGCGCTAATGACCCGCAATGGTGCCTGCGTGGCTCCATCAT
TGTCACTGCCACTAACTTTTGCCCTCCTGGAGGCTGGTGTGATCCTCCTA
ACCACCACTTTGATCTCTCTCAGCCTGTCTTCCAACACATTGCCCAGTAT
AGAGCTGGTATTGTTCCTGTAATCTACAGAAGGGTGAGATGCAAGAGAAA
TGGGGGCATAAGGTTCACAATCAATGGCCATTCTTACTTCAATTTAGTTC
TAATAACAAACGTGGGTGGAGCTGGTGACGTGCGTGCTGTATCCATCAAA
GGTTCAAGGACTAAATGGCAACCGATGTCGAGAAACTGGGGCCCAAAACT
GGCAAGCAACTCGTATCTTAATGGACAAAGCCTCTCTTTTGTTGTGACCA
CAAGTTATGGCCACAGTGTTGTTTCTTACAATGTTGCCCCTCCTAAGTGG
TCATTTGGGCAGACTTATACCGGCAGACAATTCGATATTAGGCTTATTTA
AGTTAAAATCAGCAACCCTTTTAGTATTTTAATTAGCTCTAGCGATATGG
GTGCGTACAAATAATTCTGAATTGGCCCTATGTGCTTTATACCTTTTGAA
AGTGTTGCTGCGTTTTCATCTTTACTGAATGTG
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